| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160877218
Identifier: 160877218
GI number: 160877218
Start: 4872231
End: 4872956
Strand: Reverse
Name: 160877218
Synonym: Sbal195_4114
Alternate gene names: NA
Gene position: 4872956-4872231 (Counterclockwise)
Preceding gene: 160877221
Following gene: 160877214
Centisome position: 91.13
GC content: 42.42
Gene sequence:
>726_bases ATGCGCTTGAGTTTGCTGTTAATCTGCCTATTAATCTTACCGACGTATGCATTTCCTGCCTCGATAACTATTGGTAGTGC GTTAAATCGCCCACCCTATATTATCGAAGATGCCGAATCGGGACTTGAGATTGATATTGTTAAGGCTGCCTTTAAGGAAA TGGGCCAGTCAGTTAACTTTAAATTTTACTCTCGTAAGCGCCAAGTCTTATATTTCAACAAAGACAGATTAGATGCCGTG ATGACCATGAATCCCGCAAATGGTGTCGATGGCTATTGGTCTAATGATTATGTCGACTATACCAATGTGGCGATTAGCTT GGCTGCGCAACACCTTGAAATAAAAAGTATTGCCGATCTAAAAAACTACAGTATTGCGGCCTTTGAAAATGCTCGCCTAT TGCTCGGTGCTGAATTTAATGCCGTAGCGCAACAGACGATTTATCGCGAAGTTGATACTCAATTAAGCCAGAATCGTATG TTGTACTTAGGTCGGATTAATACCGTGATTGCCGACCGTTATATCTTCACTCAATTGAATCGGTTTGTTGAGCCCAATAT CGACACCCAGCAAGCATTGAGCTATCACTTTATTTTCCCGCCGACATCCTATCGCATGGTATTCCACAACTCAGTGGCGC GGGATACTTTTAATCAAGGGCTGGCAAAAATTAAGGCCAATGGGATTTATCAGACCTTAGTGGTCAAATACTTAGGCAGT GCTTAG
Upstream 100 bases:
>100_bases GAGAGTGATCACCCTTACTGACTGTGGGTGAGGGGCGCGCTGTCTGGATCTCCCACCATTTACCGCTATAGTTATAATAC TAATAAGAGTGAGACACTGT
Downstream 100 bases:
>100_bases CAAGGCCTAAGTATTTGAGCGAAAGGCTGAATCGAGATGATCAACTACAGAGGTTAGCGTTCTGGCTCGTTCACGAGCGT TTGCGTGAGTGGGCGTATTT
Product: amino acid ABC transporter/signal transduction system
Products: NA
Alternate protein names: ABC-Type Amino Acid Transport/Signal Transduction Systems; Amino Acid ABC Transporter Periplasmic Protein; ABC Polar Amino Acid Transport System; Amino Acid Transporter; Signal Transduction Histidine Kinase-Like Protein
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MRLSLLLICLLILPTYAFPASITIGSALNRPPYIIEDAESGLEIDIVKAAFKEMGQSVNFKFYSRKRQVLYFNKDRLDAV MTMNPANGVDGYWSNDYVDYTNVAISLAAQHLEIKSIADLKNYSIAAFENARLLLGAEFNAVAQQTIYREVDTQLSQNRM LYLGRINTVIADRYIFTQLNRFVEPNIDTQQALSYHFIFPPTSYRMVFHNSVARDTFNQGLAKIKANGIYQTLVVKYLGS A
Sequences:
>Translated_241_residues MRLSLLLICLLILPTYAFPASITIGSALNRPPYIIEDAESGLEIDIVKAAFKEMGQSVNFKFYSRKRQVLYFNKDRLDAV MTMNPANGVDGYWSNDYVDYTNVAISLAAQHLEIKSIADLKNYSIAAFENARLLLGAEFNAVAQQTIYREVDTQLSQNRM LYLGRINTVIADRYIFTQLNRFVEPNIDTQQALSYHFIFPPTSYRMVFHNSVARDTFNQGLAKIKANGIYQTLVVKYLGS A >Mature_241_residues MRLSLLLICLLILPTYAFPASITIGSALNRPPYIIEDAESGLEIDIVKAAFKEMGQSVNFKFYSRKRQVLYFNKDRLDAV MTMNPANGVDGYWSNDYVDYTNVAISLAAQHLEIKSIADLKNYSIAAFENARLLLGAEFNAVAQQTIYREVDTQLSQNRM LYLGRINTVIADRYIFTQLNRFVEPNIDTQQALSYHFIFPPTSYRMVFHNSVARDTFNQGLAKIKANGIYQTLVVKYLGS A
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27352; Mature: 27352
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLSLLLICLLILPTYAFPASITIGSALNRPPYIIEDAESGLEIDIVKAAFKEMGQSVNF CCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEECCCCCCEEHHHHHHHHHHCCCCCE KFYSRKRQVLYFNKDRLDAVMTMNPANGVDGYWSNDYVDYTNVAISLAAQHLEIKSIADL EEECCCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC KNYSIAAFENARLLLGAEFNAVAQQTIYREVDTQLSQNRMLYLGRINTVIADRYIFTQLN CCCEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHH RFVEPNIDTQQALSYHFIFPPTSYRMVFHNSVARDTFNQGLAKIKANGIYQTLVVKYLGS HHCCCCCCHHHHCEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC A C >Mature Secondary Structure MRLSLLLICLLILPTYAFPASITIGSALNRPPYIIEDAESGLEIDIVKAAFKEMGQSVNF CCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEECCCCCCEEHHHHHHHHHHCCCCCE KFYSRKRQVLYFNKDRLDAVMTMNPANGVDGYWSNDYVDYTNVAISLAAQHLEIKSIADL EEECCCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC KNYSIAAFENARLLLGAEFNAVAQQTIYREVDTQLSQNRMLYLGRINTVIADRYIFTQLN CCCEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHH RFVEPNIDTQQALSYHFIFPPTSYRMVFHNSVARDTFNQGLAKIKANGIYQTLVVKYLGS HHCCCCCCHHHHCEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA