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The map label for this gene is yigB [H]

Identifier: 160877190

GI number: 160877190

Start: 4819556

End: 4820287

Strand: Reverse

Name: yigB [H]

Synonym: Sbal195_4086

Alternate gene names: 160877190

Gene position: 4820287-4819556 (Counterclockwise)

Preceding gene: 160877191

Following gene: 160877189

Centisome position: 90.14

GC content: 49.04

Gene sequence:

>732_bases
ATGCGTTGCTATCTAAGACCTCAAAATATTCAAGCGATCAGTTTCGATCTCGACGATACCCTGTACGACAACCTACCGCA
TATTTTAAATGCCGAAGCTGAGCTGGCGACGTTTCTGTTGCAGACTTATCCATTGTCGCAGGCGTGGCAAACCCATGATT
GGCGCAGGCTAAAACTGCAACTACTGCAGCAAAATCGCGAGCTAGCCCATGACACCAGCGCTGCCCGTTTGGCAACGCTT
CGCCAAGGGCTAATACAGCTAGGGTATTCGGCCGTTGAAGCCGAACGCGGCGCCGAGCAAGGATTGGCGTGTTTTTATTT
TCATCGCAGCCATTTTCAAGTATCTGACGAAGTGCTCTTGTTACTCAAACGCTTATCGCAGCATTTTAGATTAATCGGCA
TCACCAATGGCAATGTGGATGCCGAGCGAATTGGTTTAGGCGATACCTTCGAGTTTGTGTTGCATCCAGGCAATGGTGTG
CATATGAAACCCGCCAAAGACATGTTCGAATTGGCCTGCTCGCGATTAAATATTTCACCGCAGCATTTACTGCATGTTGG
CGACAGTATGAATGCTGATGTGCGCGGTGCGCGGTTGGCTGGGTGCCAGTCTGTGTGGTTGAATCCGAGTTTTGGCCGAG
TCGATTCCTTACCTATTGCGGCCTTGTTACCCCATTTAGAAATTAATGCTCTCGATGCGTTAATCAAAGTGCTGGCTATC
GACGCAAACTAA

Upstream 100 bases:

>100_bases
ACCTAGCGACTACGCAAATTTATACCAGTTTGGATTTCCAACACTTAGCTAAGGTGTACGATAACGCCCATCCTAGAGCG
AAAAAAACACAGGATAAATA

Downstream 100 bases:

>100_bases
CTCTGTGGGCAGCGTTGAATCTGCCTCTTTGCTAATCCAGAGTGATTGAGATCAAGGTTTGTTCCCAAAATTTGCACTAG
AGTGAAGCCTAATATTACTG

Product: HAD family hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MRCYLRPQNIQAISFDLDDTLYDNLPHILNAEAELATFLLQTYPLSQAWQTHDWRRLKLQLLQQNRELAHDTSAARLATL
RQGLIQLGYSAVEAERGAEQGLACFYFHRSHFQVSDEVLLLLKRLSQHFRLIGITNGNVDAERIGLGDTFEFVLHPGNGV
HMKPAKDMFELACSRLNISPQHLLHVGDSMNADVRGARLAGCQSVWLNPSFGRVDSLPIAALLPHLEINALDALIKVLAI
DAN

Sequences:

>Translated_243_residues
MRCYLRPQNIQAISFDLDDTLYDNLPHILNAEAELATFLLQTYPLSQAWQTHDWRRLKLQLLQQNRELAHDTSAARLATL
RQGLIQLGYSAVEAERGAEQGLACFYFHRSHFQVSDEVLLLLKRLSQHFRLIGITNGNVDAERIGLGDTFEFVLHPGNGV
HMKPAKDMFELACSRLNISPQHLLHVGDSMNADVRGARLAGCQSVWLNPSFGRVDSLPIAALLPHLEINALDALIKVLAI
DAN
>Mature_243_residues
MRCYLRPQNIQAISFDLDDTLYDNLPHILNAEAELATFLLQTYPLSQAWQTHDWRRLKLQLLQQNRELAHDTSAARLATL
RQGLIQLGYSAVEAERGAEQGLACFYFHRSHFQVSDEVLLLLKRLSQHFRLIGITNGNVDAERIGLGDTFEFVLHPGNGV
HMKPAKDMFELACSRLNISPQHLLHVGDSMNADVRGARLAGCQSVWLNPSFGRVDSLPIAALLPHLEINALDALIKVLAI
DAN

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yjjG [H]

Homologues:

Organism=Escherichia coli, GI2367295, Length=238, Percent_Identity=39.4957983193277, Blast_Score=168, Evalue=2e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 27254; Mature: 27254

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRCYLRPQNIQAISFDLDDTLYDNLPHILNAEAELATFLLQTYPLSQAWQTHDWRRLKLQ
CCCEECCCCCEEEEECCCHHHHHCCHHHHCCHHHHHHHHHHHCCCCHHHHCCHHHHHHHH
LLQQNRELAHDTSAARLATLRQGLIQLGYSAVEAERGAEQGLACFYFHRSHFQVSDEVLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHCCCEEEEEECCCCCCHHHHHH
LLKRLSQHFRLIGITNGNVDAERIGLGDTFEFVLHPGNGVHMKPAKDMFELACSRLNISP
HHHHHHHHEEEEEEECCCCCHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCH
QHLLHVGDSMNADVRGARLAGCQSVWLNPSFGRVDSLPIAALLPHLEINALDALIKVLAI
HHHEECCCCCCCCCCCHHHCCCCEEECCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHC
DAN
CCC
>Mature Secondary Structure
MRCYLRPQNIQAISFDLDDTLYDNLPHILNAEAELATFLLQTYPLSQAWQTHDWRRLKLQ
CCCEECCCCCEEEEECCCHHHHHCCHHHHCCHHHHHHHHHHHCCCCHHHHCCHHHHHHHH
LLQQNRELAHDTSAARLATLRQGLIQLGYSAVEAERGAEQGLACFYFHRSHFQVSDEVLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHCCCEEEEEECCCCCCHHHHHH
LLKRLSQHFRLIGITNGNVDAERIGLGDTFEFVLHPGNGVHMKPAKDMFELACSRLNISP
HHHHHHHHEEEEEEECCCCCHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCH
QHLLHVGDSMNADVRGARLAGCQSVWLNPSFGRVDSLPIAALLPHLEINALDALIKVLAI
HHHEECCCCCCCCCCCHHHCCCCEEECCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHC
DAN
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2254268; 1379743; 9278503; 6379604; 6324092 [H]