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The map label for this gene is ycaC [C]

Identifier: 160876937

GI number: 160876937

Start: 4513644

End: 4514186

Strand: Direct

Name: ycaC [C]

Synonym: Sbal195_3833

Alternate gene names: 160876937

Gene position: 4513644-4514186 (Clockwise)

Preceding gene: 160876931

Following gene: 160876939

Centisome position: 84.41

GC content: 45.67

Gene sequence:

>543_bases
ATGTTAAAACCCGAAGAATGTGTTCTCGTTATCGTCGATGTGCAGGGAAAACTTGCACAAATCATGGATAACAGTGACAA
GCTGCACCAACAACTACAGACCTTAATCCAAGGTGCACAATTATTTGAAATACCCATACTGTGGTTAGAACAGCTACCCG
ATAAGCTCGGAGCAACCAGTCCTGAGCTTCAAACCTTGCTAGAGAAAACCGGCTCCCCCATTGCCAAGCAACATTTTAGC
GGCTGGCACTGTGAAGAGTTTGCGCAGGCACTCACTAAGACGGATCGCAAACACGTCATACTGGCGGGCATTGAAACCCA
TGTGTGTGTTTATCAAACCTGTTGTGACCTTATAGAACAGCAATATTCGGTGCATCTCGTCGCAGATGGCGTCTCGTCAC
GCAGTGCCGATAATAAACAACTGGGTATTCAGATGATGACGGCCAGAGGCGCCTTATTAACTAACGTGGAATCGCTATTA
TTTGAATTACAACATCAAGCCCAAGGCGAGCGCTTTAGGGCATTATTAAAACTGATCAAATAG

Upstream 100 bases:

>100_bases
AAGCGTAAATCGAGATGAAATCTGAGCATCACAGCACGAGCTCTTAGACAAAAGCGAAGATCATCACTAAGACAATCATC
AAGCGCAGAAGGAAGGCCCG

Downstream 100 bases:

>100_bases
CAATTCACTCCTTGGCTCTAATGAAGTAAACAGCCCTTGGTTCAGGCATGACGTTGACATTCACTCCCATAAAAAAGCCC
TCGCTGAGTCAGCGAGGGCT

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: Isochorismatase Family Protein; Isochorismatase Superfamily Hydrolase; Isochorismatase Hydrolase Family Protein; Nicotinamidase-Like Amidase; Hydrolase; Amidase; Isochorismatase Family Hydrolase; Isochorismatase Domain-Containing; Amidohydrolase; Hydrolase Isochorismatase; Amidase Related Nicotinamidase; YcaC Like Amidohydrolase; Isochorismatase Family; Isochorismatase; Nicotinamidase; YcaC-Related Amidohydrolase; Isochorismatase Domain-Containing A; Isochorismatase Hydrolase Family; Hydrolase Isochorismatase Family; Nicotinamidase-Related Amidase

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MLKPEECVLVIVDVQGKLAQIMDNSDKLHQQLQTLIQGAQLFEIPILWLEQLPDKLGATSPELQTLLEKTGSPIAKQHFS
GWHCEEFAQALTKTDRKHVILAGIETHVCVYQTCCDLIEQQYSVHLVADGVSSRSADNKQLGIQMMTARGALLTNVESLL
FELQHQAQGERFRALLKLIK

Sequences:

>Translated_180_residues
MLKPEECVLVIVDVQGKLAQIMDNSDKLHQQLQTLIQGAQLFEIPILWLEQLPDKLGATSPELQTLLEKTGSPIAKQHFS
GWHCEEFAQALTKTDRKHVILAGIETHVCVYQTCCDLIEQQYSVHLVADGVSSRSADNKQLGIQMMTARGALLTNVESLL
FELQHQAQGERFRALLKLIK
>Mature_180_residues
MLKPEECVLVIVDVQGKLAQIMDNSDKLHQQLQTLIQGAQLFEIPILWLEQLPDKLGATSPELQTLLEKTGSPIAKQHFS
GWHCEEFAQALTKTDRKHVILAGIETHVCVYQTCCDLIEQQYSVHLVADGVSSRSADNKQLGIQMMTARGALLTNVESLL
FELQHQAQGERFRALLKLIK

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI103471987, Length=179, Percent_Identity=30.7262569832402, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI209969695, Length=178, Percent_Identity=32.0224719101124, Blast_Score=85, Evalue=3e-17,
Organism=Homo sapiens, GI13376007, Length=194, Percent_Identity=29.3814432989691, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17540156, Length=178, Percent_Identity=33.7078651685393, Blast_Score=93, Evalue=6e-20,
Organism=Drosophila melanogaster, GI19922924, Length=181, Percent_Identity=29.2817679558011, Blast_Score=91, Evalue=3e-19,
Organism=Drosophila melanogaster, GI21357489, Length=182, Percent_Identity=30.2197802197802, Blast_Score=85, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20186; Mature: 20186

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKPEECVLVIVDVQGKLAQIMDNSDKLHQQLQTLIQGAQLFEIPILWLEQLPDKLGATS
CCCCCCEEEEEEECCCHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHCCCC
PELQTLLEKTGSPIAKQHFSGWHCEEFAQALTKTDRKHVILAGIETHVCVYQTCCDLIEQ
HHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHH
QYSVHLVADGVSSRSADNKQLGIQMMTARGALLTNVESLLFELQHQAQGERFRALLKLIK
HHHEEEEECCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC
>Mature Secondary Structure
MLKPEECVLVIVDVQGKLAQIMDNSDKLHQQLQTLIQGAQLFEIPILWLEQLPDKLGATS
CCCCCCEEEEEEECCCHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHCCCC
PELQTLLEKTGSPIAKQHFSGWHCEEFAQALTKTDRKHVILAGIETHVCVYQTCCDLIEQ
HHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHH
QYSVHLVADGVSSRSADNKQLGIQMMTARGALLTNVESLLFELQHQAQGERFRALLKLIK
HHHEEEEECCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA