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The map label for this gene is ygfA [C]

Identifier: 160876910

GI number: 160876910

Start: 4487142

End: 4487849

Strand: Direct

Name: ygfA [C]

Synonym: Sbal195_3806

Alternate gene names: 160876910

Gene position: 4487142-4487849 (Clockwise)

Preceding gene: 160876909

Following gene: 160876912

Centisome position: 83.91

GC content: 50.85

Gene sequence:

>708_bases
ATGCCTACATCCTCCAAACTTTCTCATTTGAACACCAAAAGCGACACGGCGCACCTTGCCGTAGAAGTTGCTACTGTTGG
TGAAATGACTGATGTCGCAAGCCATGCGGCAGATATCGCCATTCATACGCAAGAAAACCGCAATCAGTTACGCAAAAGCA
TTCGCACCGCCCGCAAATCCCTTTCAGAAACCGAGCAAATCCAAGCAAGCTTAAGCGCCAGTCAACGAATGCTCGATGCA
TTGCAGGCCCAAAATGCGCAACATGTGGCGCTGTATCTCACCCACGATGGCGAACTCGCCACACCGCCGCTGATCGCTGC
GCTGTGGCAATTGGGCATTCGCACCTATCTGCCAAGGTTGCATCCCTTCAATGCTGGGCAACTGTTATTCCTGCATTACA
GTGCTGACACACCTATGCAAGCGAATCAATTCGGCATCTTAGAACCTAAGTTAGATGTGCGCGCCATTATCCCAGTAACA
GAGCTAGATGTGGTTATTACGCCCTTAGTGGCGTTTGATTTAATGGGGAATCGCATGGGCATGGGCGGCGGTTATTACGA
TAGGACGCTGGCAAACTGGCAGCTTAAAGGTAAACCTTTGCCTATGGGTTACGCCCACGACTGCCAGCAAGTGGTGAGTT
TACCCTGCGAGCATTGGGATGTGCCTTTGCCATTCATCATCACCCCAAGTCGCGTACTGACGTTTTAA

Upstream 100 bases:

>100_bases
GGCTTGTACCGAGAAGCCTTAGGAGGTAATCATTTACCCGCCTTGAACCTACGGTTCAAGGGCTACACCGGTAGCGGCAT
TCTGGGGAGCATCTTAATTT

Downstream 100 bases:

>100_bases
GCCATTAGCTGTTGCTCGAAAAATCAAATGACTATTTTAACTGCCGGCCGCCGTCGACATTATGGCAACGACCGGTGACG
TAACGGCTATTGAGCAGGTA

Product: 5-formyltetrahydrofolate cyclo-ligase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MPTSSKLSHLNTKSDTAHLAVEVATVGEMTDVASHAADIAIHTQENRNQLRKSIRTARKSLSETEQIQASLSASQRMLDA
LQAQNAQHVALYLTHDGELATPPLIAALWQLGIRTYLPRLHPFNAGQLLFLHYSADTPMQANQFGILEPKLDVRAIIPVT
ELDVVITPLVAFDLMGNRMGMGGGYYDRTLANWQLKGKPLPMGYAHDCQQVVSLPCEHWDVPLPFIITPSRVLTF

Sequences:

>Translated_235_residues
MPTSSKLSHLNTKSDTAHLAVEVATVGEMTDVASHAADIAIHTQENRNQLRKSIRTARKSLSETEQIQASLSASQRMLDA
LQAQNAQHVALYLTHDGELATPPLIAALWQLGIRTYLPRLHPFNAGQLLFLHYSADTPMQANQFGILEPKLDVRAIIPVT
ELDVVITPLVAFDLMGNRMGMGGGYYDRTLANWQLKGKPLPMGYAHDCQQVVSLPCEHWDVPLPFIITPSRVLTF
>Mature_234_residues
PTSSKLSHLNTKSDTAHLAVEVATVGEMTDVASHAADIAIHTQENRNQLRKSIRTARKSLSETEQIQASLSASQRMLDAL
QAQNAQHVALYLTHDGELATPPLIAALWQLGIRTYLPRLHPFNAGQLLFLHYSADTPMQANQFGILEPKLDVRAIIPVTE
LDVVITPLVAFDLMGNRMGMGGGYYDRTLANWQLKGKPLPMGYAHDCQQVVSLPCEHWDVPLPFIITPSRVLTF

Specific function: Unknown

COG id: COG0212

COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 5-formyltetrahydrofolate cyclo-ligase family [H]

Homologues:

Organism=Escherichia coli, GI1789278, Length=182, Percent_Identity=52.7472527472528, Blast_Score=197, Evalue=4e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002698 [H]

Pfam domain/function: PF01812 5-FTHF_cyc-lig [H]

EC number: NA

Molecular weight: Translated: 25985; Mature: 25854

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTSSKLSHLNTKSDTAHLAVEVATVGEMTDVASHAADIAIHTQENRNQLRKSIRTARKS
CCCCHHHHHCCCCCCCEEEEEEEEHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHH
LSETEQIQASLSASQRMLDALQAQNAQHVALYLTHDGELATPPLIAALWQLGIRTYLPRL
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCC
HPFNAGQLLFLHYSADTPMQANQFGILEPKLDVRAIIPVTELDVVITPLVAFDLMGNRMG
CCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCC
MGGGYYDRTLANWQLKGKPLPMGYAHDCQQVVSLPCEHWDVPLPFIITPSRVLTF
CCCCCHHHHEECCEECCCCCCCCHHHHHHHHHHCCHHHCCCCCCEEECCHHHHCC
>Mature Secondary Structure 
PTSSKLSHLNTKSDTAHLAVEVATVGEMTDVASHAADIAIHTQENRNQLRKSIRTARKS
CCCHHHHHCCCCCCCEEEEEEEEHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHH
LSETEQIQASLSASQRMLDALQAQNAQHVALYLTHDGELATPPLIAALWQLGIRTYLPRL
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCC
HPFNAGQLLFLHYSADTPMQANQFGILEPKLDVRAIIPVTELDVVITPLVAFDLMGNRMG
CCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCC
MGGGYYDRTLANWQLKGKPLPMGYAHDCQQVVSLPCEHWDVPLPFIITPSRVLTF
CCCCCHHHHEECCEECCCCCCCCHHHHHHHHHHCCHHHCCCCCCEEECCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]