| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yehS [H]
Identifier: 160876860
GI number: 160876860
Start: 4424899
End: 4425369
Strand: Direct
Name: yehS [H]
Synonym: Sbal195_3756
Alternate gene names: 160876860
Gene position: 4424899-4425369 (Clockwise)
Preceding gene: 160876859
Following gene: 160876861
Centisome position: 82.75
GC content: 42.68
Gene sequence:
>471_bases ATGACCATGATTAATAATGATATTTTGCGCCGTTTGCGCTTCGTGTTTGATTTCAACAATGCCAAAATGATTAAAATTTT TGCCAAAGCTGGAAGAGAAGTGCCAACAGAAGAGATCATTGCTCTGCTGCACAAAGAAGAGGAAGAAGGTTACAAAGCCT GTAATGACACCACTTTATGTCAGTTCCTAGACGGCCTTATCATCGAAAAGCGTGGCCTACGTGAAGGTGCAGACATCCCA GCGCCAGTATCGCGTTTAAACAATAACTTAATCTTCAAAAAACTCAGAGTTGCCCTCGAAATGCGTGAAGAAGACATAGT TGCAGCCTTGGCTCTAGCCGAAGTGCAAATGTCAAAATCAGAACTGAGCGCGCTGTTCCGCAATCCGGATCATAAGAATT TTAAAGAGTGTGGCGATCAAATCCTGCGTAACTTTATTCGCGGCTTATCACTTAAGTATCGCGGTGAATAA
Upstream 100 bases:
>100_bases ATTCGCTACGCAGCGTTAAATTCCGGCTAAATTCTGCTTTTGAGGCGGTTTGGGTATATAATACCGCCTCTTAAACCAGA CAGCGCAGCCGCGCCAAGAG
Downstream 100 bases:
>100_bases CGCAAAACATAAGTTTGTCACATCAAACGCAGCTTAGGCTGCGTTTTTTTATATCCAATTTAAGCTATACCTAAAGTTGC TTAGGCATAAACAACAGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MTMINNDILRRLRFVFDFNNAKMIKIFAKAGREVPTEEIIALLHKEEEEGYKACNDTTLCQFLDGLIIEKRGLREGADIP APVSRLNNNLIFKKLRVALEMREEDIVAALALAEVQMSKSELSALFRNPDHKNFKECGDQILRNFIRGLSLKYRGE
Sequences:
>Translated_156_residues MTMINNDILRRLRFVFDFNNAKMIKIFAKAGREVPTEEIIALLHKEEEEGYKACNDTTLCQFLDGLIIEKRGLREGADIP APVSRLNNNLIFKKLRVALEMREEDIVAALALAEVQMSKSELSALFRNPDHKNFKECGDQILRNFIRGLSLKYRGE >Mature_155_residues TMINNDILRRLRFVFDFNNAKMIKIFAKAGREVPTEEIIALLHKEEEEGYKACNDTTLCQFLDGLIIEKRGLREGADIPA PVSRLNNNLIFKKLRVALEMREEDIVAALALAEVQMSKSELSALFRNPDHKNFKECGDQILRNFIRGLSLKYRGE
Specific function: Unknown
COG id: COG4807
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788443, Length=150, Percent_Identity=46, Blast_Score=148, Evalue=2e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009921 [H]
Pfam domain/function: PF07308 DUF1456 [H]
EC number: NA
Molecular weight: Translated: 17928; Mature: 17797
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMINNDILRRLRFVFDFNNAKMIKIFAKAGREVPTEEIIALLHKEEEEGYKACNDTTLC CCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHH QFLDGLIIEKRGLREGADIPAPVSRLNNNLIFKKLRVALEMREEDIVAALALAEVQMSKS HHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELSALFRNPDHKNFKECGDQILRNFIRGLSLKYRGE HHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TMINNDILRRLRFVFDFNNAKMIKIFAKAGREVPTEEIIALLHKEEEEGYKACNDTTLC CCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHH QFLDGLIIEKRGLREGADIPAPVSRLNNNLIFKKLRVALEMREEDIVAALALAEVQMSKS HHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELSALFRNPDHKNFKECGDQILRNFIRGLSLKYRGE HHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]