| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876859
Identifier: 160876859
GI number: 160876859
Start: 4423478
End: 4424752
Strand: Direct
Name: 160876859
Synonym: Sbal195_3755
Alternate gene names: NA
Gene position: 4423478-4424752 (Clockwise)
Preceding gene: 160876858
Following gene: 160876860
Centisome position: 82.72
GC content: 50.35
Gene sequence:
>1275_bases ATGACAGAATCCTCGACAACCTCCCCTTCATCCTCTTGGATAACACACCTGACGCTTGGCATTAAAGCTATGGGGCCCGG TGTGCTTATGGCCGCAGCGGCGATTGGCGCATCGCATTTAGTCGCCTCGACTCGAGCGGGCGCCGAATTTGGCTGGCAAT TGGCTTGGGTCATTTTAGGGGTGAATTTACTTAAGTATCCCTTCTTTGCCGCTGGCGCACGCTACACCGCCGCCACTGGG GAGAGTTTACTGCACGGTTACCTCAAACAGGGCCGAGGTTATTTGCTGCTATTTACTGGACTGAATGTGATCGCCGCCTT CGCCAGCACTGCGGGTGTTTGCATGCTCACCGCCGCTATGTTGACCCAATTTATTCCGCTTCCCATCGATTGGTTAGCCC TGCTGGTATTGCTGAGTTCATTGGCTTTGCTGATCTTAGGCCATTATCAACTACTCGATAGACTCACTAAGATCATCATG TTCGCCCTAACCCTAACCACCTTAATTGCCGTGACCTTAGCTTGGGATCATGCTCAGCCATTAGCGAGCAATTTTGTTTC TCCCTCACCTTGGCAATGGGCCCATGTGGGATTTCTGGTCGCCATGATGGGCTGGATGCCGGCACCGATTGAAGTCAGCG CTTGGAATTCCCTCTGGTTGCTCGAAAAACAAAAAAGCCAGACGGTCACGAAAGCGCAGGCGCTGCTCGACTTTAACTTA GGCTACATCATCACCGCGATCCTCGCGATCGTGTTTCTGTCCTTGGGCGCCTTAGTGATGCACGGCAGTGGTGAGCACTT TTCCGATTCGGGCGCGCAATTTGCTAATCAATTGATCAACCTTTACAGCCAAGTCATGGGCGGCGAGAGTCGTTATCTTA TTGGTGTTGTGGCTTTTCTCTGTATTTTTAGCACCACAGTAACCGTTATCGATGGCTACAGCCGCACCTTAGATATGGGC TGGCAATTACTCACCTCAAAGGCCAGTTCAGACAAACGCCTCACTGGGATCATGCTCGCCATCAGTGCCTTTGGCTTATT GCTGATCCTCTTCTTTAAAGGCGCACTGTTGCCGCTACTCGAGTTTGTGATGATTTTGGCCTTTATGACCACAGTCATTT TTGCTTGGTTAAACTACCGCTTAATGACCAGCAAACAGCTCCCCGAAGCCGATAGATATGGCAGTAAGATGAAGCTACTC TCTTGGTTTGGCCTGAGTTATCTGCTGATTTTCGCGGCGCTGTTTATCTATTGGTACAACGTCATTAAAAGCTAA
Upstream 100 bases:
>100_bases CTCACTTAGCGTTAGCACAGCTTTAGCATGAGCGCAGCCTTAACATAAGGGCTTGTTCGATTCCCCAGATTAATTTTCAA CAGGTACTTTTAATAACGAC
Downstream 100 bases:
>100_bases TTGCCAGAATGGTATCAATGCTATTTATGTCAGAGTCATAAATAGCATTCGCTACGCAGCGTTAAATTCCGGCTAAATTC TGCTTTTGAGGCGGTTTGGG
Product: putative manganese transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 424; Mature: 423
Protein sequence:
>424_residues MTESSTTSPSSSWITHLTLGIKAMGPGVLMAAAAIGASHLVASTRAGAEFGWQLAWVILGVNLLKYPFFAAGARYTAATG ESLLHGYLKQGRGYLLLFTGLNVIAAFASTAGVCMLTAAMLTQFIPLPIDWLALLVLLSSLALLILGHYQLLDRLTKIIM FALTLTTLIAVTLAWDHAQPLASNFVSPSPWQWAHVGFLVAMMGWMPAPIEVSAWNSLWLLEKQKSQTVTKAQALLDFNL GYIITAILAIVFLSLGALVMHGSGEHFSDSGAQFANQLINLYSQVMGGESRYLIGVVAFLCIFSTTVTVIDGYSRTLDMG WQLLTSKASSDKRLTGIMLAISAFGLLLILFFKGALLPLLEFVMILAFMTTVIFAWLNYRLMTSKQLPEADRYGSKMKLL SWFGLSYLLIFAALFIYWYNVIKS
Sequences:
>Translated_424_residues MTESSTTSPSSSWITHLTLGIKAMGPGVLMAAAAIGASHLVASTRAGAEFGWQLAWVILGVNLLKYPFFAAGARYTAATG ESLLHGYLKQGRGYLLLFTGLNVIAAFASTAGVCMLTAAMLTQFIPLPIDWLALLVLLSSLALLILGHYQLLDRLTKIIM FALTLTTLIAVTLAWDHAQPLASNFVSPSPWQWAHVGFLVAMMGWMPAPIEVSAWNSLWLLEKQKSQTVTKAQALLDFNL GYIITAILAIVFLSLGALVMHGSGEHFSDSGAQFANQLINLYSQVMGGESRYLIGVVAFLCIFSTTVTVIDGYSRTLDMG WQLLTSKASSDKRLTGIMLAISAFGLLLILFFKGALLPLLEFVMILAFMTTVIFAWLNYRLMTSKQLPEADRYGSKMKLL SWFGLSYLLIFAALFIYWYNVIKS >Mature_423_residues TESSTTSPSSSWITHLTLGIKAMGPGVLMAAAAIGASHLVASTRAGAEFGWQLAWVILGVNLLKYPFFAAGARYTAATGE SLLHGYLKQGRGYLLLFTGLNVIAAFASTAGVCMLTAAMLTQFIPLPIDWLALLVLLSSLALLILGHYQLLDRLTKIIMF ALTLTTLIAVTLAWDHAQPLASNFVSPSPWQWAHVGFLVAMMGWMPAPIEVSAWNSLWLLEKQKSQTVTKAQALLDFNLG YIITAILAIVFLSLGALVMHGSGEHFSDSGAQFANQLINLYSQVMGGESRYLIGVVAFLCIFSTTVTVIDGYSRTLDMGW QLLTSKASSDKRLTGIMLAISAFGLLLILFFKGALLPLLEFVMILAFMTTVIFAWLNYRLMTSKQLPEADRYGSKMKLLS WFGLSYLLIFAALFIYWYNVIKS
Specific function: Unknown
COG id: COG1914
COG function: function code P; Mn2+ and Fe2+ transporters of the NRAMP family
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46358; Mature: 46226
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTESSTTSPSSSWITHLTLGIKAMGPGVLMAAAAIGASHLVASTRAGAEFGWQLAWVILG CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH VNLLKYPFFAAGARYTAATGESLLHGYLKQGRGYLLLFTGLNVIAAFASTAGVCMLTAAM HHHHHCCHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHH LTQFIPLPIDWLALLVLLSSLALLILGHYQLLDRLTKIIMFALTLTTLIAVTLAWDHAQP HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH LASNFVSPSPWQWAHVGFLVAMMGWMPAPIEVSAWNSLWLLEKQKSQTVTKAQALLDFNL HHHCCCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCCEEEEECHHHHHHHHHHHHHHCCH GYIITAILAIVFLSLGALVMHGSGEHFSDSGAQFANQLINLYSQVMGGESRYLIGVVAFL HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH CIFSTTVTVIDGYSRTLDMGWQLLTSKASSDKRLTGIMLAISAFGLLLILFFKGALLPLL HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EFVMILAFMTTVIFAWLNYRLMTSKQLPEADRYGSKMKLLSWFGLSYLLIFAALFIYWYN HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH VIKS HHCC >Mature Secondary Structure TESSTTSPSSSWITHLTLGIKAMGPGVLMAAAAIGASHLVASTRAGAEFGWQLAWVILG CCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH VNLLKYPFFAAGARYTAATGESLLHGYLKQGRGYLLLFTGLNVIAAFASTAGVCMLTAAM HHHHHCCHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHH LTQFIPLPIDWLALLVLLSSLALLILGHYQLLDRLTKIIMFALTLTTLIAVTLAWDHAQP HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH LASNFVSPSPWQWAHVGFLVAMMGWMPAPIEVSAWNSLWLLEKQKSQTVTKAQALLDFNL HHHCCCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCCEEEEECHHHHHHHHHHHHHHCCH GYIITAILAIVFLSLGALVMHGSGEHFSDSGAQFANQLINLYSQVMGGESRYLIGVVAFL HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH CIFSTTVTVIDGYSRTLDMGWQLLTSKASSDKRLTGIMLAISAFGLLLILFFKGALLPLL HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EFVMILAFMTTVIFAWLNYRLMTSKQLPEADRYGSKMKLLSWFGLSYLLIFAALFIYWYN HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH VIKS HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11248100 [H]