| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876858
Identifier: 160876858
GI number: 160876858
Start: 4422787
End: 4423326
Strand: Direct
Name: 160876858
Synonym: Sbal195_3754
Alternate gene names: NA
Gene position: 4422787-4423326 (Clockwise)
Preceding gene: 160876855
Following gene: 160876859
Centisome position: 82.71
GC content: 45.74
Gene sequence:
>540_bases ATGGAAGACAAGATCATTCATCAAGCAGAGTTTGAGTCCAATCTAGGTTTGTATTGGTTGCTTTCAGGGGCCGCCTATTT CAGCCTCAGCATAGTCGGCATTCCCTTGTTATTGCTTTGGTTTCCAATCGGGCTGTGGGGAACTCGCCGCTATATTCGTA ATATGAGTGCCGAGCTCACCAGTAATAAGTTGATTGTGCGCCGCGGAATATTAACTCGTACCGAAAATACAGTGCCTTTG GACAAAATTACCGATATGGCATTGATCCAAGGCCCAATTATGCGCCTATTTGGTCTGCATAAACTCACGGTAGAAACCGC AGGGCAATCGGGCGCAGGCGCCTTGATAAGCTTAGTCGGCATAGTTGATGCGCCTCAATTTAGAACCCGCGTATTAGAAC AAAAAGAACGTCTTACTCAGCGCCCACATCCAGCGAGTCCATCTGTACAACCTGATGATGCGTTATTACAAAACGTAGTC GAGATGGTAGCAAGCCTAAAACGAATTGAAGCCTTGCTCAGCCAAAAATTAAATAGATAA
Upstream 100 bases:
>100_bases TATGCTTTCCTTCTGCGAGAATCAAAAAGGTCTAGGCACTAGAAAATTCAACTAACGAGACAAATCGTGGTACTTGAATA TCAGAATTTAAGGAAGAAAC
Downstream 100 bases:
>100_bases ATTGAATAAAACGACTTTCAGTTCAATCACTTTCCCTTTAATGTTGAGCCACTCACTTAGCGTTAGCACAGCTTTAGCAT GAGCGCAGCCTTAACATAAG
Product: membrane-flanked domain-containing protein
Products: NA
Alternate protein names: Membrane-Flanked Domain Protein
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MEDKIIHQAEFESNLGLYWLLSGAAYFSLSIVGIPLLLLWFPIGLWGTRRYIRNMSAELTSNKLIVRRGILTRTENTVPL DKITDMALIQGPIMRLFGLHKLTVETAGQSGAGALISLVGIVDAPQFRTRVLEQKERLTQRPHPASPSVQPDDALLQNVV EMVASLKRIEALLSQKLNR
Sequences:
>Translated_179_residues MEDKIIHQAEFESNLGLYWLLSGAAYFSLSIVGIPLLLLWFPIGLWGTRRYIRNMSAELTSNKLIVRRGILTRTENTVPL DKITDMALIQGPIMRLFGLHKLTVETAGQSGAGALISLVGIVDAPQFRTRVLEQKERLTQRPHPASPSVQPDDALLQNVV EMVASLKRIEALLSQKLNR >Mature_179_residues MEDKIIHQAEFESNLGLYWLLSGAAYFSLSIVGIPLLLLWFPIGLWGTRRYIRNMSAELTSNKLIVRRGILTRTENTVPL DKITDMALIQGPIMRLFGLHKLTVETAGQSGAGALISLVGIVDAPQFRTRVLEQKERLTQRPHPASPSVQPDDALLQNVV EMVASLKRIEALLSQKLNR
Specific function: Unknown
COG id: COG3428
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19999; Mature: 19999
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDKIIHQAEFESNLGLYWLLSGAAYFSLSIVGIPLLLLWFPIGLWGTRRYIRNMSAELT CCCCHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SNKLIVRRGILTRTENTVPLDKITDMALIQGPIMRLFGLHKLTVETAGQSGAGALISLVG CCHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH IVDAPQFRTRVLEQKERLTQRPHPASPSVQPDDALLQNVVEMVASLKRIEALLSQKLNR HCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEDKIIHQAEFESNLGLYWLLSGAAYFSLSIVGIPLLLLWFPIGLWGTRRYIRNMSAELT CCCCHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SNKLIVRRGILTRTENTVPLDKITDMALIQGPIMRLFGLHKLTVETAGQSGAGALISLVG CCHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH IVDAPQFRTRVLEQKERLTQRPHPASPSVQPDDALLQNVVEMVASLKRIEALLSQKLNR HCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA