Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

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The map label for this gene is 160876858

Identifier: 160876858

GI number: 160876858

Start: 4422787

End: 4423326

Strand: Direct

Name: 160876858

Synonym: Sbal195_3754

Alternate gene names: NA

Gene position: 4422787-4423326 (Clockwise)

Preceding gene: 160876855

Following gene: 160876859

Centisome position: 82.71

GC content: 45.74

Gene sequence:

>540_bases
ATGGAAGACAAGATCATTCATCAAGCAGAGTTTGAGTCCAATCTAGGTTTGTATTGGTTGCTTTCAGGGGCCGCCTATTT
CAGCCTCAGCATAGTCGGCATTCCCTTGTTATTGCTTTGGTTTCCAATCGGGCTGTGGGGAACTCGCCGCTATATTCGTA
ATATGAGTGCCGAGCTCACCAGTAATAAGTTGATTGTGCGCCGCGGAATATTAACTCGTACCGAAAATACAGTGCCTTTG
GACAAAATTACCGATATGGCATTGATCCAAGGCCCAATTATGCGCCTATTTGGTCTGCATAAACTCACGGTAGAAACCGC
AGGGCAATCGGGCGCAGGCGCCTTGATAAGCTTAGTCGGCATAGTTGATGCGCCTCAATTTAGAACCCGCGTATTAGAAC
AAAAAGAACGTCTTACTCAGCGCCCACATCCAGCGAGTCCATCTGTACAACCTGATGATGCGTTATTACAAAACGTAGTC
GAGATGGTAGCAAGCCTAAAACGAATTGAAGCCTTGCTCAGCCAAAAATTAAATAGATAA

Upstream 100 bases:

>100_bases
TATGCTTTCCTTCTGCGAGAATCAAAAAGGTCTAGGCACTAGAAAATTCAACTAACGAGACAAATCGTGGTACTTGAATA
TCAGAATTTAAGGAAGAAAC

Downstream 100 bases:

>100_bases
ATTGAATAAAACGACTTTCAGTTCAATCACTTTCCCTTTAATGTTGAGCCACTCACTTAGCGTTAGCACAGCTTTAGCAT
GAGCGCAGCCTTAACATAAG

Product: membrane-flanked domain-containing protein

Products: NA

Alternate protein names: Membrane-Flanked Domain Protein

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MEDKIIHQAEFESNLGLYWLLSGAAYFSLSIVGIPLLLLWFPIGLWGTRRYIRNMSAELTSNKLIVRRGILTRTENTVPL
DKITDMALIQGPIMRLFGLHKLTVETAGQSGAGALISLVGIVDAPQFRTRVLEQKERLTQRPHPASPSVQPDDALLQNVV
EMVASLKRIEALLSQKLNR

Sequences:

>Translated_179_residues
MEDKIIHQAEFESNLGLYWLLSGAAYFSLSIVGIPLLLLWFPIGLWGTRRYIRNMSAELTSNKLIVRRGILTRTENTVPL
DKITDMALIQGPIMRLFGLHKLTVETAGQSGAGALISLVGIVDAPQFRTRVLEQKERLTQRPHPASPSVQPDDALLQNVV
EMVASLKRIEALLSQKLNR
>Mature_179_residues
MEDKIIHQAEFESNLGLYWLLSGAAYFSLSIVGIPLLLLWFPIGLWGTRRYIRNMSAELTSNKLIVRRGILTRTENTVPL
DKITDMALIQGPIMRLFGLHKLTVETAGQSGAGALISLVGIVDAPQFRTRVLEQKERLTQRPHPASPSVQPDDALLQNVV
EMVASLKRIEALLSQKLNR

Specific function: Unknown

COG id: COG3428

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19999; Mature: 19999

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDKIIHQAEFESNLGLYWLLSGAAYFSLSIVGIPLLLLWFPIGLWGTRRYIRNMSAELT
CCCCHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SNKLIVRRGILTRTENTVPLDKITDMALIQGPIMRLFGLHKLTVETAGQSGAGALISLVG
CCHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
IVDAPQFRTRVLEQKERLTQRPHPASPSVQPDDALLQNVVEMVASLKRIEALLSQKLNR
HCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEDKIIHQAEFESNLGLYWLLSGAAYFSLSIVGIPLLLLWFPIGLWGTRRYIRNMSAELT
CCCCHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SNKLIVRRGILTRTENTVPLDKITDMALIQGPIMRLFGLHKLTVETAGQSGAGALISLVG
CCHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
IVDAPQFRTRVLEQKERLTQRPHPASPSVQPDDALLQNVVEMVASLKRIEALLSQKLNR
HCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA