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The map label for this gene is lolB [H]

Identifier: 160876843

GI number: 160876843

Start: 4405965

End: 4406609

Strand: Direct

Name: lolB [H]

Synonym: Sbal195_3739

Alternate gene names: 160876843

Gene position: 4405965-4406609 (Clockwise)

Preceding gene: 160876839

Following gene: 160876844

Centisome position: 82.4

GC content: 50.08

Gene sequence:

>645_bases
ATGAATAATTTGAAGCGCCTCACAAAAACCATTTTCTCTTGTTTTACCTTAAGCGCCCTACTCTTGCTGGCGGGGTGTGA
AACCTTGCCGCCGATGACTGACCTAAGCCCAATCACAGTCACGGATGCGCGCCAAGCAACCGCTTGGGAATTACAGGGTA
AACTGGCGATAAAAACCCCTGACGATAAGCTCAGCGCTAATATCTACTGGCGCCACAGTGAAGATCGCGACGAACTGACA
CTCACCACTATGCTAGGTACGACTGTGTTGACGCTTAACTCAACCCCGAACTCGGCCCATTTGCATATCGATGGCAAAGA
CTTTCGCGACGATAATGCCCAACGTTTACTCGAGCGTGTCAGCGGTTGGTCCATCCCCTTGGCCGATTTACCTTTGTGGA
TCACTGGCCAAGTTGGCCCCAATGATCAGGTCATCGTACGCGATAGCCAAGGCAAACCTAAACAGCTAACCAATACTCAA
ACCCCGCCACCTTGGCAGGTCGCATTTTTAAGTTGGCAATCCCAGAGCGGCGCCAGTGTGCCCCATCAATTAAAGCTTGA
ACGTAGTGATTTAGAACTCAAACTACAACTGAATCAATGGCAAGCTCTTGGCAAGCCCGCGATCTTAGTCGGAGAACAAC
CTTAA

Upstream 100 bases:

>100_bases
AGGGAGCAAATCTAAGTGACCGCCGATGGAAATTTTACGTTTGGCATTGGTATTCTTTCCAAGCCCTCGTATCATAAGGA
CTTTGGTATATCAGTCATAG

Downstream 100 bases:

>100_bases
CATGCCCGCTGCAATTTCCCGCAATTGGCCTGCGCCAGCCAAGCTCAACTTGTTTTTACACATTAATGGCCGCCGCGCCG
ACGGTTACCACGAACTGCAA

Product: outer membrane lipoprotein LolB

Products: 5-aminolevulinate; CoA; CO2 [C]

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MNNLKRLTKTIFSCFTLSALLLLAGCETLPPMTDLSPITVTDARQATAWELQGKLAIKTPDDKLSANIYWRHSEDRDELT
LTTMLGTTVLTLNSTPNSAHLHIDGKDFRDDNAQRLLERVSGWSIPLADLPLWITGQVGPNDQVIVRDSQGKPKQLTNTQ
TPPPWQVAFLSWQSQSGASVPHQLKLERSDLELKLQLNQWQALGKPAILVGEQP

Sequences:

>Translated_214_residues
MNNLKRLTKTIFSCFTLSALLLLAGCETLPPMTDLSPITVTDARQATAWELQGKLAIKTPDDKLSANIYWRHSEDRDELT
LTTMLGTTVLTLNSTPNSAHLHIDGKDFRDDNAQRLLERVSGWSIPLADLPLWITGQVGPNDQVIVRDSQGKPKQLTNTQ
TPPPWQVAFLSWQSQSGASVPHQLKLERSDLELKLQLNQWQALGKPAILVGEQP
>Mature_214_residues
MNNLKRLTKTIFSCFTLSALLLLAGCETLPPMTDLSPITVTDARQATAWELQGKLAIKTPDDKLSANIYWRHSEDRDELT
LTTMLGTTVLTLNSTPNSAHLHIDGKDFRDDNAQRLLERVSGWSIPLADLPLWITGQVGPNDQVIVRDSQGKPKQLTNTQ
TPPPWQVAFLSWQSQSGASVPHQLKLERSDLELKLQLNQWQALGKPAILVGEQP

Specific function: Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the lolA protein [H]

COG id: COG3017

COG function: function code M; Outer membrane lipoprotein involved in outer membrane biogenesis

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lolB family [H]

Homologues:

Organism=Escherichia coli, GI1787460, Length=200, Percent_Identity=27, Blast_Score=76, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004565 [H]

Pfam domain/function: PF03550 LolB [H]

EC number: NA

Molecular weight: Translated: 23811; Mature: 23811

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNLKRLTKTIFSCFTLSALLLLAGCETLPPMTDLSPITVTDARQATAWELQGKLAIKTP
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCEEEEECCEEEEECC
DDKLSANIYWRHSEDRDELTLTTMLGTTVLTLNSTPNSAHLHIDGKDFRDDNAQRLLERV
CCCEEEEEEEEECCCCCCEEEEEEECEEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHH
SGWSIPLADLPLWITGQVGPNDQVIVRDSQGKPKQLTNTQTPPPWQVAFLSWQSQSGASV
CCCCCCHHHCCEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCC
PHQLKLERSDLELKLQLNQWQALGKPAILVGEQP
CCEEEEECCCEEEEEEECHHHHCCCCEEEEECCC
>Mature Secondary Structure
MNNLKRLTKTIFSCFTLSALLLLAGCETLPPMTDLSPITVTDARQATAWELQGKLAIKTP
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCEEEEECCEEEEECC
DDKLSANIYWRHSEDRDELTLTTMLGTTVLTLNSTPNSAHLHIDGKDFRDDNAQRLLERV
CCCEEEEEEEEECCCCCCEEEEEEECEEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHH
SGWSIPLADLPLWITGQVGPNDQVIVRDSQGKPKQLTNTQTPPPWQVAFLSWQSQSGASV
CCCCCCHHHCCEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCC
PHQLKLERSDLELKLQLNQWQALGKPAILVGEQP
CCEEEEECCCEEEEEEECHHHHCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Succinyl-CoA; glycine [C]

Specific reaction: Succinyl-CoA + glycine = 5-aminolevulinate + CoA + CO2 [C]

General reaction: Acyltransferases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA