| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is tas [H]
Identifier: 160876791
GI number: 160876791
Start: 4349487
End: 4350527
Strand: Direct
Name: tas [H]
Synonym: Sbal195_3686
Alternate gene names: 160876791
Gene position: 4349487-4350527 (Clockwise)
Preceding gene: 160876784
Following gene: 160876792
Centisome position: 81.34
GC content: 49.76
Gene sequence:
>1041_bases ATGGAATACAGACGCATACCGCATTCTAATCTCGAGGTCAGCAAAATCTGTTTGGGCACTATGACTTGGGGCGAACAAAA TACCCAAGCCGAAGCATTTGCACAGCTGGACTACGCCATAGGAAATGGCATCAACTTTATCGATACGGCGGAAATGTATC CCGTCCCACCTAAGCCCGAAACCCAAGGGGAAACAGAGCGTATTCTTGGGCAATATATTAAGGCTCGCGGCAACCGTGAC GATCTAGTTATTGCCACTAAAATTGCCGCACCGGGTGGTAAGAGTGATTATATTCGCAAGAATATGGCGCTGGACTGGAA CAACATCCATCAAGCGGTCGATGCCTCCTTAGCGCGCCTCCAAATCGACACTATCGATCTTTATCAAATCCATTGGCCCG ACCGAAATACCAACTTCTTTGGTGAACTGTTTTACGATCAACAGGATCAAGAACATCAAACCCCGATCCTCGAAACCCTT GAAGCCCTCGCCGAAGTCATTCGCCAAGGTAAAGTGCGCTATATCGGTGTGTCGAACGAAACACCTTGGGGCTTGATGAA GTACCTGCAACTCGCCGAAAAACACGGTCTGCCGCGTATTGTGAGTGTGCAAAACCCTTATAACTTGCTCAATCGCAGCT TCGAAGTCGGCATGAGCGAAATCAGCCACCGCGAAAACCTGCCGCTGCTCGCTTACTCACCACTGGCCTTTGGCGCCTTA ACCGGCAAATACTGCAACGACCAATGGCCCGAAGGTGCACGCCTGACCTTGTTTAAGCGTTTCGCCCGTTACACAGGTTC GCAAATGGCACTGGAGGCCACGCAAGCCTACGTCGATTTAGCCCGCGAGTTCAAACTCACGCCCGCACAAATGGCGCTAG CCTTTGTTAACTCACGTCAGTTTGTCGGCTCCAACATTATCGGCGCCACCGACTTGTATCAACTGAAAGAAAATATCGAC AGCCTGAAAGTCACCTTATCGTCAGAGCTATTAGTGCGATTAAACGAACTATCCGATAAATTCAGATTACCTTGCCCTTA G
Upstream 100 bases:
>100_bases CTATTTTTAGCGCACTAACATTTCAACCTATGGTTTAACCTTTGCTTTACAGCAAAAGCTTGGTAGCCTCAAACTAAGAG AGTTTTCGTAGGAGAAATAG
Downstream 100 bases:
>100_bases CCCCCGAATCTTAGCCCCTAGGCTTAGTCGGCGAGTCGTTTGAATAATCAATAGCATCAGGCCAATCCCCCTGATGCTAT TGATTTCATTCAGCTCAACG
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MEYRRIPHSNLEVSKICLGTMTWGEQNTQAEAFAQLDYAIGNGINFIDTAEMYPVPPKPETQGETERILGQYIKARGNRD DLVIATKIAAPGGKSDYIRKNMALDWNNIHQAVDASLARLQIDTIDLYQIHWPDRNTNFFGELFYDQQDQEHQTPILETL EALAEVIRQGKVRYIGVSNETPWGLMKYLQLAEKHGLPRIVSVQNPYNLLNRSFEVGMSEISHRENLPLLAYSPLAFGAL TGKYCNDQWPEGARLTLFKRFARYTGSQMALEATQAYVDLAREFKLTPAQMALAFVNSRQFVGSNIIGATDLYQLKENID SLKVTLSSELLVRLNELSDKFRLPCP
Sequences:
>Translated_346_residues MEYRRIPHSNLEVSKICLGTMTWGEQNTQAEAFAQLDYAIGNGINFIDTAEMYPVPPKPETQGETERILGQYIKARGNRD DLVIATKIAAPGGKSDYIRKNMALDWNNIHQAVDASLARLQIDTIDLYQIHWPDRNTNFFGELFYDQQDQEHQTPILETL EALAEVIRQGKVRYIGVSNETPWGLMKYLQLAEKHGLPRIVSVQNPYNLLNRSFEVGMSEISHRENLPLLAYSPLAFGAL TGKYCNDQWPEGARLTLFKRFARYTGSQMALEATQAYVDLAREFKLTPAQMALAFVNSRQFVGSNIIGATDLYQLKENID SLKVTLSSELLVRLNELSDKFRLPCP >Mature_346_residues MEYRRIPHSNLEVSKICLGTMTWGEQNTQAEAFAQLDYAIGNGINFIDTAEMYPVPPKPETQGETERILGQYIKARGNRD DLVIATKIAAPGGKSDYIRKNMALDWNNIHQAVDASLARLQIDTIDLYQIHWPDRNTNFFGELFYDQQDQEHQTPILETL EALAEVIRQGKVRYIGVSNETPWGLMKYLQLAEKHGLPRIVSVQNPYNLLNRSFEVGMSEISHRENLPLLAYSPLAFGAL TGKYCNDQWPEGARLTLFKRFARYTGSQMALEATQAYVDLAREFKLTPAQMALAFVNSRQFVGSNIIGATDLYQLKENID SLKVTLSSELLVRLNELSDKFRLPCP
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436969, Length=348, Percent_Identity=31.3218390804598, Blast_Score=123, Evalue=2e-28, Organism=Homo sapiens, GI4504825, Length=346, Percent_Identity=31.2138728323699, Blast_Score=123, Evalue=3e-28, Organism=Homo sapiens, GI27436964, Length=332, Percent_Identity=30.7228915662651, Blast_Score=119, Evalue=5e-27, Organism=Homo sapiens, GI27436962, Length=332, Percent_Identity=30.7228915662651, Blast_Score=119, Evalue=6e-27, Organism=Homo sapiens, GI27436966, Length=332, Percent_Identity=30.421686746988, Blast_Score=116, Evalue=3e-26, Organism=Homo sapiens, GI27436971, Length=335, Percent_Identity=28.955223880597, Blast_Score=102, Evalue=4e-22, Organism=Homo sapiens, GI223718702, Length=349, Percent_Identity=26.3610315186246, Blast_Score=79, Evalue=7e-15, Organism=Homo sapiens, GI41327764, Length=321, Percent_Identity=27.7258566978193, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI41152114, Length=321, Percent_Identity=26.791277258567, Blast_Score=71, Evalue=1e-12, Organism=Escherichia coli, GI1789199, Length=347, Percent_Identity=56.4841498559078, Blast_Score=399, Evalue=1e-112, Organism=Escherichia coli, GI87081735, Length=345, Percent_Identity=31.304347826087, Blast_Score=145, Evalue=5e-36, Organism=Escherichia coli, GI1789375, Length=353, Percent_Identity=28.0453257790368, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI1788070, Length=306, Percent_Identity=28.1045751633987, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1788081, Length=346, Percent_Identity=27.1676300578035, Blast_Score=80, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6323998, Length=345, Percent_Identity=26.3768115942029, Blast_Score=98, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6319958, Length=318, Percent_Identity=26.4150943396226, Blast_Score=97, Evalue=3e-21, Organism=Saccharomyces cerevisiae, GI6325169, Length=355, Percent_Identity=27.0422535211268, Blast_Score=96, Evalue=6e-21, Organism=Saccharomyces cerevisiae, GI6319951, Length=331, Percent_Identity=25.3776435045317, Blast_Score=84, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6322615, Length=271, Percent_Identity=25.4612546125461, Blast_Score=83, Evalue=6e-17, Organism=Drosophila melanogaster, GI24646159, Length=228, Percent_Identity=31.140350877193, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI24646155, Length=243, Percent_Identity=28.8065843621399, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 39268; Mature: 39268
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYRRIPHSNLEVSKICLGTMTWGEQNTQAEAFAQLDYAIGNGINFIDTAEMYPVPPKPE CCCCCCCCCCCCHHHEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCC TQGETERILGQYIKARGNRDDLVIATKIAAPGGKSDYIRKNMALDWNNIHQAVDASLARL CCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHE QIDTIDLYQIHWPDRNTNFFGELFYDQQDQEHQTPILETLEALAEVIRQGKVRYIGVSNE EEEEEEEEEEECCCCCCCHHEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCC TPWGLMKYLQLAEKHGLPRIVSVQNPYNLLNRSFEVGMSEISHRENLPLLAYSPLAFGAL CCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHH TGKYCNDQWPEGARLTLFKRFARYTGSQMALEATQAYVDLAREFKLTPAQMALAFVNSRQ CCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCH FVGSNIIGATDLYQLKENIDSLKVTLSSELLVRLNELSDKFRLPCP HHCCCCCCHHHHHHHHHCHHHEEEEEHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MEYRRIPHSNLEVSKICLGTMTWGEQNTQAEAFAQLDYAIGNGINFIDTAEMYPVPPKPE CCCCCCCCCCCCHHHEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCC TQGETERILGQYIKARGNRDDLVIATKIAAPGGKSDYIRKNMALDWNNIHQAVDASLARL CCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHE QIDTIDLYQIHWPDRNTNFFGELFYDQQDQEHQTPILETLEALAEVIRQGKVRYIGVSNE EEEEEEEEEEECCCCCCCHHEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCC TPWGLMKYLQLAEKHGLPRIVSVQNPYNLLNRSFEVGMSEISHRENLPLLAYSPLAFGAL CCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHH TGKYCNDQWPEGARLTLFKRFARYTGSQMALEATQAYVDLAREFKLTPAQMALAFVNSRQ CCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCH FVGSNIIGATDLYQLKENIDSLKVTLSSELLVRLNELSDKFRLPCP HHCCCCCCHHHHHHHHHCHHHEEEEEHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9560382; 9278503 [H]