| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is gltT [H]
Identifier: 160876777
GI number: 160876777
Start: 4331403
End: 4332737
Strand: Reverse
Name: gltT [H]
Synonym: Sbal195_3671
Alternate gene names: 160876777
Gene position: 4332737-4331403 (Counterclockwise)
Preceding gene: 160876778
Following gene: 160876775
Centisome position: 81.03
GC content: 50.64
Gene sequence:
>1335_bases ATGACAAAACCTAAGTCGTCGGCATTAGGCCGTGTTTGGTCTCGCTGGATGTCAGTGCCGCTGTGGCTGCAAATTGTTAT TGGTATGGTGCTAGGCATTATTGTCGGCGTCATTTTTGGTGAGCAAGCCACTTGCCTAAAGCCGCTCGGCACCTTGTTTG TTAATGCCATAAAGATGCTGATCGTGCCACTGGTGTTTTGCTCGCTGATCGTGGGCGTTACGTCGATGCAAGACACCGGC AAGATGGGACGAATCGGCATTAAATCCTTTGGGTTTTATCTGTTTACTACGGCTATCGCGATCAGTATCGGCCTGCTTGT TGGTTATGTGCTGCAACCCGGCGCAGGCTTAGGATTAACGCTGGCAGAAGGCGCGACTCAAACCGCCAAAGCTGTGCCTT CATTAGTCGATACCTTGGTTGATATAGTGCCGACAAATCCGATTGCGGCCATGGCAAGCGGCCAAATTTTGCAAGTCATC GTATTTGCCATCGCCTTAGGTATCGCATTAGTGCTGATTGGCGAGCACGGTAAACCTGCGATTAAAGTGTTCGAAAGCCT CGCCGAAGCCATGTACAAACTGGCTGACATGGTGATGAAACTCGCGCCCTACGGCGTCTTTGGGCTAATGGCTTGGGTGG CGGGGGAGTATGGTATTGATATGCTTTGGCCCCTGATCAAAGTCATCATTGCTGTATACCTTGGTTGTATTATCCACGTG CTGGGTTTCTATAGTTTTTTACTGCGCGGATTTGCGAAGTTAAGTCCGCTGCAGTTTTTTAAAGGCATTAGCAATGCCAT GTTAGTGGCGTTTACCACGTCTAGCTCTGCGGGTACGCTCCCTGCAAGCATGAAGTGCGCGAGTGAAAACCTAGGCGTTC ATAAGAAGATTTCTAGCTTCGTGTTACCGCTGGGCACTACCATCAATATGGATGGCACTGCGTTATACCAAGGCGTTACT GTGCTGTTTGTCGCGCAGGCGTTTGGCATCGACCTGACTGTTGTCGATTATTTCACCATTATTTTAACCGCGACTTTGGC TTCTATTGGCACTGCAGGTGTGCCCGGTGCTGGCTTGGTGATGCTGACGTTAGTGCTGACAACCGTAGGGCTGCCCTTAG AAGGGGTGGCATTGATAGCGGGGATTGACCGTATTTTAGATATGGTGCGCACTGTGGTGAACGTCTCTGGCGATTTAGTG GCGACAACTGTGATTGCCAAGTCTGAAGATGAGCTGGATATGGCGCATTACAATGCCGACACGGAGCAAAGCGCCGTGCT AGCCGAGCAGAATATCGCCCTTGAAACGGCGGCGGAGAATAGCGCCAAAGTCTAG
Upstream 100 bases:
>100_bases CCCCTCTGCTAGACTCGGCGATTGCCTCATGTAGACTGAGAAACTAGCGCGCTAGTTTTGGTCTTTGCCCCATCATAGTT TCGAATTCAAGGTTATGAAT
Downstream 100 bases:
>100_bases TTGGCTTCAGTTGCTGGCTGTGAAACTAAAAAACCGCCAATGGCGGTTTTTTTATGCGGACAAATTTTCTTTGTTGAAGC TTACTACACTGGGTTTATTT
Product: sodium:dicarboxylate symporter
Products: L-aspartate [Cytoplasm]; Proton [Cytoplasm]; L-glutamate [Cytoplasm] [C]
Alternate protein names: Glutamate-aspartate carrier protein [H]
Number of amino acids: Translated: 444; Mature: 443
Protein sequence:
>444_residues MTKPKSSALGRVWSRWMSVPLWLQIVIGMVLGIIVGVIFGEQATCLKPLGTLFVNAIKMLIVPLVFCSLIVGVTSMQDTG KMGRIGIKSFGFYLFTTAIAISIGLLVGYVLQPGAGLGLTLAEGATQTAKAVPSLVDTLVDIVPTNPIAAMASGQILQVI VFAIALGIALVLIGEHGKPAIKVFESLAEAMYKLADMVMKLAPYGVFGLMAWVAGEYGIDMLWPLIKVIIAVYLGCIIHV LGFYSFLLRGFAKLSPLQFFKGISNAMLVAFTTSSSAGTLPASMKCASENLGVHKKISSFVLPLGTTINMDGTALYQGVT VLFVAQAFGIDLTVVDYFTIILTATLASIGTAGVPGAGLVMLTLVLTTVGLPLEGVALIAGIDRILDMVRTVVNVSGDLV ATTVIAKSEDELDMAHYNADTEQSAVLAEQNIALETAAENSAKV
Sequences:
>Translated_444_residues MTKPKSSALGRVWSRWMSVPLWLQIVIGMVLGIIVGVIFGEQATCLKPLGTLFVNAIKMLIVPLVFCSLIVGVTSMQDTG KMGRIGIKSFGFYLFTTAIAISIGLLVGYVLQPGAGLGLTLAEGATQTAKAVPSLVDTLVDIVPTNPIAAMASGQILQVI VFAIALGIALVLIGEHGKPAIKVFESLAEAMYKLADMVMKLAPYGVFGLMAWVAGEYGIDMLWPLIKVIIAVYLGCIIHV LGFYSFLLRGFAKLSPLQFFKGISNAMLVAFTTSSSAGTLPASMKCASENLGVHKKISSFVLPLGTTINMDGTALYQGVT VLFVAQAFGIDLTVVDYFTIILTATLASIGTAGVPGAGLVMLTLVLTTVGLPLEGVALIAGIDRILDMVRTVVNVSGDLV ATTVIAKSEDELDMAHYNADTEQSAVLAEQNIALETAAENSAKV >Mature_443_residues TKPKSSALGRVWSRWMSVPLWLQIVIGMVLGIIVGVIFGEQATCLKPLGTLFVNAIKMLIVPLVFCSLIVGVTSMQDTGK MGRIGIKSFGFYLFTTAIAISIGLLVGYVLQPGAGLGLTLAEGATQTAKAVPSLVDTLVDIVPTNPIAAMASGQILQVIV FAIALGIALVLIGEHGKPAIKVFESLAEAMYKLADMVMKLAPYGVFGLMAWVAGEYGIDMLWPLIKVIIAVYLGCIIHVL GFYSFLLRGFAKLSPLQFFKGISNAMLVAFTTSSSAGTLPASMKCASENLGVHKKISSFVLPLGTTINMDGTALYQGVTV LFVAQAFGIDLTVVDYFTIILTATLASIGTAGVPGAGLVMLTLVLTTVGLPLEGVALIAGIDRILDMVRTVVNVSGDLVA TTVIAKSEDELDMAHYNADTEQSAVLAEQNIALETAAENSAKV
Specific function: This carrier protein is part of the Na(+)-dependent, binding-protein-independent glutamate-aspartate transport system [H]
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI21314632, Length=450, Percent_Identity=32.2222222222222, Blast_Score=201, Evalue=9e-52, Organism=Homo sapiens, GI66773030, Length=509, Percent_Identity=30.4518664047151, Blast_Score=196, Evalue=3e-50, Organism=Homo sapiens, GI40254478, Length=501, Percent_Identity=32.5349301397206, Blast_Score=191, Evalue=9e-49, Organism=Homo sapiens, GI5032093, Length=389, Percent_Identity=36.2467866323907, Blast_Score=189, Evalue=5e-48, Organism=Homo sapiens, GI169790839, Length=475, Percent_Identity=31.1578947368421, Blast_Score=186, Evalue=5e-47, Organism=Homo sapiens, GI4827012, Length=321, Percent_Identity=36.1370716510903, Blast_Score=172, Evalue=6e-43, Organism=Homo sapiens, GI194239697, Length=301, Percent_Identity=35.8803986710963, Blast_Score=168, Evalue=9e-42, Organism=Homo sapiens, GI223468566, Length=292, Percent_Identity=36.3013698630137, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI223468564, Length=283, Percent_Identity=36.7491166077738, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI301601644, Length=191, Percent_Identity=37.17277486911, Blast_Score=133, Evalue=3e-31, Organism=Homo sapiens, GI262359914, Length=383, Percent_Identity=28.1984334203655, Blast_Score=121, Evalue=1e-27, Organism=Escherichia coli, GI1790514, Length=412, Percent_Identity=37.621359223301, Blast_Score=265, Evalue=6e-72, Organism=Escherichia coli, GI1789947, Length=413, Percent_Identity=36.8038740920097, Blast_Score=249, Evalue=2e-67, Organism=Escherichia coli, GI1788024, Length=432, Percent_Identity=30.787037037037, Blast_Score=153, Evalue=2e-38, Organism=Escherichia coli, GI1789473, Length=372, Percent_Identity=26.6129032258064, Blast_Score=101, Evalue=1e-22, Organism=Caenorhabditis elegans, GI71996953, Length=484, Percent_Identity=34.504132231405, Blast_Score=239, Evalue=2e-63, Organism=Caenorhabditis elegans, GI71983106, Length=444, Percent_Identity=34.6846846846847, Blast_Score=216, Evalue=2e-56, Organism=Caenorhabditis elegans, GI71983099, Length=444, Percent_Identity=34.6846846846847, Blast_Score=216, Evalue=3e-56, Organism=Caenorhabditis elegans, GI17537407, Length=473, Percent_Identity=30.6553911205074, Blast_Score=197, Evalue=1e-50, Organism=Caenorhabditis elegans, GI193206505, Length=410, Percent_Identity=32.6829268292683, Blast_Score=191, Evalue=7e-49, Organism=Caenorhabditis elegans, GI193206654, Length=416, Percent_Identity=30.7692307692308, Blast_Score=182, Evalue=3e-46, Organism=Caenorhabditis elegans, GI17541374, Length=416, Percent_Identity=31.4903846153846, Blast_Score=170, Evalue=1e-42, Organism=Drosophila melanogaster, GI24583025, Length=471, Percent_Identity=29.0870488322718, Blast_Score=167, Evalue=1e-41, Organism=Drosophila melanogaster, GI17137668, Length=471, Percent_Identity=29.0870488322718, Blast_Score=167, Evalue=1e-41, Organism=Drosophila melanogaster, GI24583023, Length=471, Percent_Identity=29.0870488322718, Blast_Score=167, Evalue=1e-41, Organism=Drosophila melanogaster, GI281360481, Length=471, Percent_Identity=29.2993630573248, Blast_Score=141, Evalue=1e-33, Organism=Drosophila melanogaster, GI281360483, Length=471, Percent_Identity=29.2993630573248, Blast_Score=141, Evalue=1e-33, Organism=Drosophila melanogaster, GI17137666, Length=471, Percent_Identity=29.2993630573248, Blast_Score=141, Evalue=1e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR018107 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 46667; Mature: 46536
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: PS00714 NA_DICARBOXYL_SYMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKPKSSALGRVWSRWMSVPLWLQIVIGMVLGIIVGVIFGEQATCLKPLGTLFVNAIKML CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH IVPLVFCSLIVGVTSMQDTGKMGRIGIKSFGFYLFTTAIAISIGLLVGYVLQPGAGLGLT HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE LAEGATQTAKAVPSLVDTLVDIVPTNPIAAMASGQILQVIVFAIALGIALVLIGEHGKPA ECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHH IKVFESLAEAMYKLADMVMKLAPYGVFGLMAWVAGEYGIDMLWPLIKVIIAVYLGCIIHV HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH LGFYSFLLRGFAKLSPLQFFKGISNAMLVAFTTSSSAGTLPASMKCASENLGVHKKISSF HHHHHHHHHHHHHCCHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHCCCCHHHHHHHH VLPLGTTINMDGTALYQGVTVLFVAQAFGIDLTVVDYFTIILTATLASIGTAGVPGAGLV HHCCCCEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHH MLTLVLTTVGLPLEGVALIAGIDRILDMVRTVVNVSGDLVATTVIAKSEDELDMAHYNAD HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEECCCCCHHHHHCCCC TEQSAVLAEQNIALETAAENSAKV CHHHHHHHHCCCHHEECCCCCCCC >Mature Secondary Structure TKPKSSALGRVWSRWMSVPLWLQIVIGMVLGIIVGVIFGEQATCLKPLGTLFVNAIKML CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH IVPLVFCSLIVGVTSMQDTGKMGRIGIKSFGFYLFTTAIAISIGLLVGYVLQPGAGLGLT HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE LAEGATQTAKAVPSLVDTLVDIVPTNPIAAMASGQILQVIVFAIALGIALVLIGEHGKPA ECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHH IKVFESLAEAMYKLADMVMKLAPYGVFGLMAWVAGEYGIDMLWPLIKVIIAVYLGCIIHV HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH LGFYSFLLRGFAKLSPLQFFKGISNAMLVAFTTSSSAGTLPASMKCASENLGVHKKISSF HHHHHHHHHHHHHCCHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHCCCCHHHHHHHH VLPLGTTINMDGTALYQGVTVLFVAQAFGIDLTVVDYFTIILTATLASIGTAGVPGAGLV HHCCCCEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHH MLTLVLTTVGLPLEGVALIAGIDRILDMVRTVVNVSGDLVATTVIAKSEDELDMAHYNAD HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEECCCCCHHHHHCCCC TEQSAVLAEQNIALETAAENSAKV CHHHHHHHHCCCHHEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-aspartate [Periplasm]; Proton [Periplasm]; L-glutamate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-aspartate [Periplasm] = Proton [Cytoplasm] + L-aspartate [Cytoplasm] Proton [Periplasm] + L-glutamate [Periplasm] = Proton [Cytoplasm] + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]