| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160876769
Identifier: 160876769
GI number: 160876769
Start: 4323462
End: 4324340
Strand: Direct
Name: 160876769
Synonym: Sbal195_3663
Alternate gene names: NA
Gene position: 4323462-4324340 (Clockwise)
Preceding gene: 160876766
Following gene: 160876770
Centisome position: 80.85
GC content: 37.54
Gene sequence:
>879_bases ATGATCATCAGCAGTAAAACGAGTGAAAAACTTCGAGACTTAATAAACGAAGAGACTGAGTATCGCTCTGGGTCAAATTT GGTTAAGTTTTTTAATACTCTAGGTTTTAATCACTCATATGGACAAGGCTTCCCCTCTCGTTGGAAGTATACAGATGGTT CATTAGAAGCAATCAATGGAACACCTCAACTTGATAAGTGCATTAAAGCAGTATTCAATCCCGTCAATTTTATTAGCCGT ATTGACGAGTTGGATCGCTTGATTGCCGAATTTAACCAGTATTTAGCTTTTGACAAATGGCAAGTTGTTAGAAATGAAGC TGAAATATCCTTCAAGAAGCTTCATAAAGTGGAGTTAAACGAGGATAGCGTGAAATCAAATAGTCTGTCTGAGTCTGACT TTTTAAGTCGTGAGTTTAGTGGTTTCACTATCTCTGATTTAGGCTTAGACCCTACTGTAACTGACGTACTGAACAAACGA GTCGATGAAATTGAAAAAACTTATAGTTCGGCAGCTTATCTTTCTACGATTCTAATCGCTGGTAGTACTTTAGAAGGGGT TTTTCTTGGATTAGCATCGCGTTATCCGAGAGCATTTAACACGGTGAAGTCTTCCCCCAAAAATCGTGAAGGTAAAGTTC AACCGTTTCATGACTGGACTCTCGCCGCCTTTATTGATGTGGCAAAAGACTTAGAACTAATTCAGCTAGATACCCATCAA TTTTCACATACTTTGAGGGACTTTCGTAATTATATTCATCCCTATCAACAAATGTCATCAGGCTTCACACCAAGAGAGCA TACAGCTAAGATTTGTTTACAAGTACTTAAGGCTGCAATTACTGAAATAACTATAAGTATCAATAAACTACGCATTTAA
Upstream 100 bases:
>100_bases ACACACTGATTTTTTGATATAGCAGAATAATGGCGGCATTATAACGATACAAAAGAAGCAGGTTCGCTGTCTAAGACGCG TTTGTACTAGAGGAATTTGA
Downstream 100 bases:
>100_bases AATGGCTAAGCTTCATTCGAATACTGATATACAATGAAATTCATTACTTTTTTATGACATATGTAGAATAATCCCAAATT GGATTATCAAACAGTTGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MIISSKTSEKLRDLINEETEYRSGSNLVKFFNTLGFNHSYGQGFPSRWKYTDGSLEAINGTPQLDKCIKAVFNPVNFISR IDELDRLIAEFNQYLAFDKWQVVRNEAEISFKKLHKVELNEDSVKSNSLSESDFLSREFSGFTISDLGLDPTVTDVLNKR VDEIEKTYSSAAYLSTILIAGSTLEGVFLGLASRYPRAFNTVKSSPKNREGKVQPFHDWTLAAFIDVAKDLELIQLDTHQ FSHTLRDFRNYIHPYQQMSSGFTPREHTAKICLQVLKAAITEITISINKLRI
Sequences:
>Translated_292_residues MIISSKTSEKLRDLINEETEYRSGSNLVKFFNTLGFNHSYGQGFPSRWKYTDGSLEAINGTPQLDKCIKAVFNPVNFISR IDELDRLIAEFNQYLAFDKWQVVRNEAEISFKKLHKVELNEDSVKSNSLSESDFLSREFSGFTISDLGLDPTVTDVLNKR VDEIEKTYSSAAYLSTILIAGSTLEGVFLGLASRYPRAFNTVKSSPKNREGKVQPFHDWTLAAFIDVAKDLELIQLDTHQ FSHTLRDFRNYIHPYQQMSSGFTPREHTAKICLQVLKAAITEITISINKLRI >Mature_292_residues MIISSKTSEKLRDLINEETEYRSGSNLVKFFNTLGFNHSYGQGFPSRWKYTDGSLEAINGTPQLDKCIKAVFNPVNFISR IDELDRLIAEFNQYLAFDKWQVVRNEAEISFKKLHKVELNEDSVKSNSLSESDFLSREFSGFTISDLGLDPTVTDVLNKR VDEIEKTYSSAAYLSTILIAGSTLEGVFLGLASRYPRAFNTVKSSPKNREGKVQPFHDWTLAAFIDVAKDLELIQLDTHQ FSHTLRDFRNYIHPYQQMSSGFTPREHTAKICLQVLKAAITEITISINKLRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33280; Mature: 33280
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIISSKTSEKLRDLINEETEYRSGSNLVKFFNTLGFNHSYGQGFPSRWKYTDGSLEAING CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCC TPQLDKCIKAVFNPVNFISRIDELDRLIAEFNQYLAFDKWQVVRNEAEISFKKLHKVELN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EDSVKSNSLSESDFLSREFSGFTISDLGLDPTVTDVLNKRVDEIEKTYSSAAYLSTILIA CHHHCCCCCCHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GSTLEGVFLGLASRYPRAFNTVKSSPKNREGKVQPFHDWTLAAFIDVAKDLELIQLDTHQ CCHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHEEEHHHH FSHTLRDFRNYIHPYQQMSSGFTPREHTAKICLQVLKAAITEITISINKLRI HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIISSKTSEKLRDLINEETEYRSGSNLVKFFNTLGFNHSYGQGFPSRWKYTDGSLEAING CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCC TPQLDKCIKAVFNPVNFISRIDELDRLIAEFNQYLAFDKWQVVRNEAEISFKKLHKVELN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EDSVKSNSLSESDFLSREFSGFTISDLGLDPTVTDVLNKRVDEIEKTYSSAAYLSTILIA CHHHCCCCCCHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GSTLEGVFLGLASRYPRAFNTVKSSPKNREGKVQPFHDWTLAAFIDVAKDLELIQLDTHQ CCHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHEEEHHHH FSHTLRDFRNYIHPYQQMSSGFTPREHTAKICLQVLKAAITEITISINKLRI HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA