Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

Click here to switch to the map view.

The map label for this gene is 160876739

Identifier: 160876739

GI number: 160876739

Start: 4283150

End: 4283815

Strand: Direct

Name: 160876739

Synonym: Sbal195_3633

Alternate gene names: NA

Gene position: 4283150-4283815 (Clockwise)

Preceding gene: 160876738

Following gene: 160876740

Centisome position: 80.1

GC content: 47.6

Gene sequence:

>666_bases
ATGCTATTGCTGGTACTGCCGATTGGGATCTGGTCAGTCACCGGCAGCTATTTCGTCTTAATGGATCTTGGGTTTATCCG
TGGCGATCATATTAAAGTGCAAGACTCACGGCATATCGATCCCAGCCAGCTCCATTACCCAATGGCAGCGGTTTATGAGC
GTTTCCCCAAGGCTCAAGCAATCACGTTAACCTCAGTCACTGATACCCTCTACTACCGGATTAAACTGAGCGATAAGTCC
ATTCTCGTGAACGCAGATTCGGGTAAGTTATTGCCTTCAATAACGGAGAAACAAGCTCGAATGATAGCTTCAAACTATCA
GCATCATGGCTCTTTACCCATAGAGGCTAAGCTTGTTAGTGCAACCCTGCTCACCGATATCGCCCCTGCAGAATTAGCGC
CGCGATACTTGCCCGTTTGGAGAATGGATTTTAACGATAGCGCTGCTACAAGCCTTTACCTATCAGCGACAACGGGAGAG
TTAGTCACGCGCAGACATGACTATTGGCGTTTGTTCGATCTCTTTTGGAAATGGCACATTATGGATTACGACGAAGGTCA
AGCCATCGACAATCTTCTGCTACTGAGTACGGCTCTAGTCTCTATTGTGGCTGTGTTAGCTGGCTTCGTTTTACTTTGGC
AGCGCAGAAGGAGGTATCTGAGATGA

Upstream 100 bases:

>100_bases
TGGCTAAATTAGTTCACAAAATAAAAGGTGAGTCATCAACTTGAAGCGAGTTCACACACTTAAACGAGTCTCATCGGCGC
ACTTTCTGCACAGATGGTTG

Downstream 100 bases:

>100_bases
TGCCGAAACTTAAATCTAAACCTAAGCCTAAGCCTCAAAGTAAACGCTTCAAACGCTGGGTCAAAATCGCTCACTATTGG
CTCGGTGCCATAGTTAGCAT

Product: PepSY-associated TM helix

Products: NA

Alternate protein names: PepSY-Associated TM Helix Domain-Containing Protein

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MLLLVLPIGIWSVTGSYFVLMDLGFIRGDHIKVQDSRHIDPSQLHYPMAAVYERFPKAQAITLTSVTDTLYYRIKLSDKS
ILVNADSGKLLPSITEKQARMIASNYQHHGSLPIEAKLVSATLLTDIAPAELAPRYLPVWRMDFNDSAATSLYLSATTGE
LVTRRHDYWRLFDLFWKWHIMDYDEGQAIDNLLLLSTALVSIVAVLAGFVLLWQRRRRYLR

Sequences:

>Translated_221_residues
MLLLVLPIGIWSVTGSYFVLMDLGFIRGDHIKVQDSRHIDPSQLHYPMAAVYERFPKAQAITLTSVTDTLYYRIKLSDKS
ILVNADSGKLLPSITEKQARMIASNYQHHGSLPIEAKLVSATLLTDIAPAELAPRYLPVWRMDFNDSAATSLYLSATTGE
LVTRRHDYWRLFDLFWKWHIMDYDEGQAIDNLLLLSTALVSIVAVLAGFVLLWQRRRRYLR
>Mature_221_residues
MLLLVLPIGIWSVTGSYFVLMDLGFIRGDHIKVQDSRHIDPSQLHYPMAAVYERFPKAQAITLTSVTDTLYYRIKLSDKS
ILVNADSGKLLPSITEKQARMIASNYQHHGSLPIEAKLVSATLLTDIAPAELAPRYLPVWRMDFNDSAATSLYLSATTGE
LVTRRHDYWRLFDLFWKWHIMDYDEGQAIDNLLLLSTALVSIVAVLAGFVLLWQRRRRYLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25283; Mature: 25283

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLLVLPIGIWSVTGSYFVLMDLGFIRGDHIKVQDSRHIDPSQLHYPMAAVYERFPKAQA
CEEEEEECCHHHHCCCEEEEEEHHHCCCCEEEECCCCCCCHHHHCCCHHHHHHHCCCCEE
ITLTSVTDTLYYRIKLSDKSILVNADSGKLLPSITEKQARMIASNYQHHGSLPIEAKLVS
EEEEEECEEEEEEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHH
ATLLTDIAPAELAPRYLPVWRMDFNDSAATSLYLSATTGELVTRRHDYWRLFDLFWKWHI
HHHHHCCCCHHHCCCCCEEEEECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHEEEE
MDYDEGQAIDNLLLLSTALVSIVAVLAGFVLLWQRRRRYLR
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLLLVLPIGIWSVTGSYFVLMDLGFIRGDHIKVQDSRHIDPSQLHYPMAAVYERFPKAQA
CEEEEEECCHHHHCCCEEEEEEHHHCCCCEEEECCCCCCCHHHHCCCHHHHHHHCCCCEE
ITLTSVTDTLYYRIKLSDKSILVNADSGKLLPSITEKQARMIASNYQHHGSLPIEAKLVS
EEEEEECEEEEEEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHH
ATLLTDIAPAELAPRYLPVWRMDFNDSAATSLYLSATTGELVTRRHDYWRLFDLFWKWHI
HHHHHCCCCHHHCCCCCEEEEECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHEEEE
MDYDEGQAIDNLLLLSTALVSIVAVLAGFVLLWQRRRRYLR
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA