| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876739
Identifier: 160876739
GI number: 160876739
Start: 4283150
End: 4283815
Strand: Direct
Name: 160876739
Synonym: Sbal195_3633
Alternate gene names: NA
Gene position: 4283150-4283815 (Clockwise)
Preceding gene: 160876738
Following gene: 160876740
Centisome position: 80.1
GC content: 47.6
Gene sequence:
>666_bases ATGCTATTGCTGGTACTGCCGATTGGGATCTGGTCAGTCACCGGCAGCTATTTCGTCTTAATGGATCTTGGGTTTATCCG TGGCGATCATATTAAAGTGCAAGACTCACGGCATATCGATCCCAGCCAGCTCCATTACCCAATGGCAGCGGTTTATGAGC GTTTCCCCAAGGCTCAAGCAATCACGTTAACCTCAGTCACTGATACCCTCTACTACCGGATTAAACTGAGCGATAAGTCC ATTCTCGTGAACGCAGATTCGGGTAAGTTATTGCCTTCAATAACGGAGAAACAAGCTCGAATGATAGCTTCAAACTATCA GCATCATGGCTCTTTACCCATAGAGGCTAAGCTTGTTAGTGCAACCCTGCTCACCGATATCGCCCCTGCAGAATTAGCGC CGCGATACTTGCCCGTTTGGAGAATGGATTTTAACGATAGCGCTGCTACAAGCCTTTACCTATCAGCGACAACGGGAGAG TTAGTCACGCGCAGACATGACTATTGGCGTTTGTTCGATCTCTTTTGGAAATGGCACATTATGGATTACGACGAAGGTCA AGCCATCGACAATCTTCTGCTACTGAGTACGGCTCTAGTCTCTATTGTGGCTGTGTTAGCTGGCTTCGTTTTACTTTGGC AGCGCAGAAGGAGGTATCTGAGATGA
Upstream 100 bases:
>100_bases TGGCTAAATTAGTTCACAAAATAAAAGGTGAGTCATCAACTTGAAGCGAGTTCACACACTTAAACGAGTCTCATCGGCGC ACTTTCTGCACAGATGGTTG
Downstream 100 bases:
>100_bases TGCCGAAACTTAAATCTAAACCTAAGCCTAAGCCTCAAAGTAAACGCTTCAAACGCTGGGTCAAAATCGCTCACTATTGG CTCGGTGCCATAGTTAGCAT
Product: PepSY-associated TM helix
Products: NA
Alternate protein names: PepSY-Associated TM Helix Domain-Containing Protein
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MLLLVLPIGIWSVTGSYFVLMDLGFIRGDHIKVQDSRHIDPSQLHYPMAAVYERFPKAQAITLTSVTDTLYYRIKLSDKS ILVNADSGKLLPSITEKQARMIASNYQHHGSLPIEAKLVSATLLTDIAPAELAPRYLPVWRMDFNDSAATSLYLSATTGE LVTRRHDYWRLFDLFWKWHIMDYDEGQAIDNLLLLSTALVSIVAVLAGFVLLWQRRRRYLR
Sequences:
>Translated_221_residues MLLLVLPIGIWSVTGSYFVLMDLGFIRGDHIKVQDSRHIDPSQLHYPMAAVYERFPKAQAITLTSVTDTLYYRIKLSDKS ILVNADSGKLLPSITEKQARMIASNYQHHGSLPIEAKLVSATLLTDIAPAELAPRYLPVWRMDFNDSAATSLYLSATTGE LVTRRHDYWRLFDLFWKWHIMDYDEGQAIDNLLLLSTALVSIVAVLAGFVLLWQRRRRYLR >Mature_221_residues MLLLVLPIGIWSVTGSYFVLMDLGFIRGDHIKVQDSRHIDPSQLHYPMAAVYERFPKAQAITLTSVTDTLYYRIKLSDKS ILVNADSGKLLPSITEKQARMIASNYQHHGSLPIEAKLVSATLLTDIAPAELAPRYLPVWRMDFNDSAATSLYLSATTGE LVTRRHDYWRLFDLFWKWHIMDYDEGQAIDNLLLLSTALVSIVAVLAGFVLLWQRRRRYLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25283; Mature: 25283
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLLVLPIGIWSVTGSYFVLMDLGFIRGDHIKVQDSRHIDPSQLHYPMAAVYERFPKAQA CEEEEEECCHHHHCCCEEEEEEHHHCCCCEEEECCCCCCCHHHHCCCHHHHHHHCCCCEE ITLTSVTDTLYYRIKLSDKSILVNADSGKLLPSITEKQARMIASNYQHHGSLPIEAKLVS EEEEEECEEEEEEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHH ATLLTDIAPAELAPRYLPVWRMDFNDSAATSLYLSATTGELVTRRHDYWRLFDLFWKWHI HHHHHCCCCHHHCCCCCEEEEECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHEEEE MDYDEGQAIDNLLLLSTALVSIVAVLAGFVLLWQRRRRYLR EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLLLVLPIGIWSVTGSYFVLMDLGFIRGDHIKVQDSRHIDPSQLHYPMAAVYERFPKAQA CEEEEEECCHHHHCCCEEEEEEHHHCCCCEEEECCCCCCCHHHHCCCHHHHHHHCCCCEE ITLTSVTDTLYYRIKLSDKSILVNADSGKLLPSITEKQARMIASNYQHHGSLPIEAKLVS EEEEEECEEEEEEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHH ATLLTDIAPAELAPRYLPVWRMDFNDSAATSLYLSATTGELVTRRHDYWRLFDLFWKWHI HHHHHCCCCHHHCCCCCEEEEECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHEEEE MDYDEGQAIDNLLLLSTALVSIVAVLAGFVLLWQRRRRYLR EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA