| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yneA [C]
Identifier: 160876639
GI number: 160876639
Start: 4153676
End: 4154686
Strand: Direct
Name: yneA [C]
Synonym: Sbal195_3533
Alternate gene names: 160876639
Gene position: 4153676-4154686 (Clockwise)
Preceding gene: 160876638
Following gene: 160876640
Centisome position: 77.68
GC content: 38.48
Gene sequence:
>1011_bases GTGGTGAGATTATTTTTGTTGTTCATTGCATTAAGTCAATTACCAATATCCTCTGCCTATGGAAAAGAGCTGAAATTTGC TGTTGTGCCTAAATTTTATAGTATTTTTTTTGATCAAAGCAAAAATGGCTGTATAGATGCAGCGGCTCAAATAGAAGGCG TAGAATGTATATATCGAGGACCTGAAATTAGCAATGTTAGATTGCAAGATCAGGTAATAAATCAACTGATTGATGAAGGT ATCGATGGTATCGCTGTCGCGGTTACGCAGTCTAAATACCTGGTTGAAAATAGCCTAAAAAGAGCCAAAGAAGCCGGAAT TCCAATTGTTACCTATGACTCTGATTTTGATGCTTCTATCAAAGAAGAACCTAAGAATTTACGCTTCGCTTATATAGGCA CAGACAATTTTGAACTAGGTAAATCATTGGGTGAACAGTTAAAAAAACTACGGCCAAATGGGGGAACTCTGATAATGCAT TCTGGGCGGCCAGATTCTCCCAATCTGAATTTAAGACTTATGGGTGTACGTTCCGCCTTATCAGGAAAAAAATACGATGC TCCTCCTGGTGAATTGCTTAATGGCGATTTAGGCTGGACAGAAGTTAGAGAACCTTTGTTTAATTTTGATCAACTTAGTC AAGCCGTTAAACAAATGGAGTCAGTGATGAAAGGTAAGCCTGTGAAGGCAGACTCTTTTATCGCAGTGGGTGGTTGGGCG CAAAATAATGATGCGCTCTATCGTGAAATGATTGCTCCATACCAAGAAAAAATTAATAACAAAGAAATCGTCATTATTAT TACCGATACATCTCCAGAGCAGTTAACTATGCTGAAAGATGGTCTTGCTCATGTCAATGTGGGTCAAAATCCATATGAAA TGGGAAAACAGGCAATTTTGACGCTTTATAAAATTGTCACAAAACAAAAGTATGAAGAAACAATATACACACCTGTTACG TTTTGCACTCCTCAAAACGCTGACACCTGCGACAAGCGTACCGGAATGTGA
Upstream 100 bases:
>100_bases GTTCAATAACACCGTTGCATCTCATGTCTTTAAATCTATTCTTTTGCTACATTCTGTTGTAAAGCTTTAAGTCGCTGTCT CATTATTTTTAGGAGGAAGT
Downstream 100 bases:
>100_bases CGCAAAAATGATGGATTAGGCCAGTACACCTCTCAAAAGAGCCATTGATCATAATTGATGGCTCACGCTCAATTATCTAT CTTTATAAACAGAGTCTATG
Product: sugar-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MVRLFLLFIALSQLPISSAYGKELKFAVVPKFYSIFFDQSKNGCIDAAAQIEGVECIYRGPEISNVRLQDQVINQLIDEG IDGIAVAVTQSKYLVENSLKRAKEAGIPIVTYDSDFDASIKEEPKNLRFAYIGTDNFELGKSLGEQLKKLRPNGGTLIMH SGRPDSPNLNLRLMGVRSALSGKKYDAPPGELLNGDLGWTEVREPLFNFDQLSQAVKQMESVMKGKPVKADSFIAVGGWA QNNDALYREMIAPYQEKINNKEIVIIITDTSPEQLTMLKDGLAHVNVGQNPYEMGKQAILTLYKIVTKQKYEETIYTPVT FCTPQNADTCDKRTGM
Sequences:
>Translated_336_residues MVRLFLLFIALSQLPISSAYGKELKFAVVPKFYSIFFDQSKNGCIDAAAQIEGVECIYRGPEISNVRLQDQVINQLIDEG IDGIAVAVTQSKYLVENSLKRAKEAGIPIVTYDSDFDASIKEEPKNLRFAYIGTDNFELGKSLGEQLKKLRPNGGTLIMH SGRPDSPNLNLRLMGVRSALSGKKYDAPPGELLNGDLGWTEVREPLFNFDQLSQAVKQMESVMKGKPVKADSFIAVGGWA QNNDALYREMIAPYQEKINNKEIVIIITDTSPEQLTMLKDGLAHVNVGQNPYEMGKQAILTLYKIVTKQKYEETIYTPVT FCTPQNADTCDKRTGM >Mature_336_residues MVRLFLLFIALSQLPISSAYGKELKFAVVPKFYSIFFDQSKNGCIDAAAQIEGVECIYRGPEISNVRLQDQVINQLIDEG IDGIAVAVTQSKYLVENSLKRAKEAGIPIVTYDSDFDASIKEEPKNLRFAYIGTDNFELGKSLGEQLKKLRPNGGTLIMH SGRPDSPNLNLRLMGVRSALSGKKYDAPPGELLNGDLGWTEVREPLFNFDQLSQAVKQMESVMKGKPVKADSFIAVGGWA QNNDALYREMIAPYQEKINNKEIVIIITDTSPEQLTMLKDGLAHVNVGQNPYEMGKQAILTLYKIVTKQKYEETIYTPVT FCTPQNADTCDKRTGM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37403; Mature: 37403
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRLFLLFIALSQLPISSAYGKELKFAVVPKFYSIFFDQSKNGCIDAAAQIEGVECIYRG CHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHCCCCCCCCHHHHHCCCCEEEECC PEISNVRLQDQVINQLIDEGIDGIAVAVTQSKYLVENSLKRAKEAGIPIVTYDSDFDASI CCCCCEEHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCCHH KEEPKNLRFAYIGTDNFELGKSLGEQLKKLRPNGGTLIMHSGRPDSPNLNLRLMGVRSAL HCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEEEHHHH SGKKYDAPPGELLNGDLGWTEVREPLFNFDQLSQAVKQMESVMKGKPVKADSFIAVGGWA CCCCCCCCCHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCC QNNDALYREMIAPYQEKINNKEIVIIITDTSPEQLTMLKDGLAHVNVGQNPYEMGKQAIL CCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHCCCEEECCCCHHHHHHHHHH TLYKIVTKQKYEETIYTPVTFCTPQNADTCDKRTGM HHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHCCCC >Mature Secondary Structure MVRLFLLFIALSQLPISSAYGKELKFAVVPKFYSIFFDQSKNGCIDAAAQIEGVECIYRG CHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHCCCCCCCCHHHHHCCCCEEEECC PEISNVRLQDQVINQLIDEGIDGIAVAVTQSKYLVENSLKRAKEAGIPIVTYDSDFDASI CCCCCEEHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCCHH KEEPKNLRFAYIGTDNFELGKSLGEQLKKLRPNGGTLIMHSGRPDSPNLNLRLMGVRSAL HCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEEEHHHH SGKKYDAPPGELLNGDLGWTEVREPLFNFDQLSQAVKQMESVMKGKPVKADSFIAVGGWA CCCCCCCCCHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCC QNNDALYREMIAPYQEKINNKEIVIIITDTSPEQLTMLKDGLAHVNVGQNPYEMGKQAIL CCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHCCCEEECCCCHHHHHHHHHH TLYKIVTKQKYEETIYTPVTFCTPQNADTCDKRTGM HHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA