| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876608
Identifier: 160876608
GI number: 160876608
Start: 4121149
End: 4121841
Strand: Direct
Name: 160876608
Synonym: Sbal195_3502
Alternate gene names: NA
Gene position: 4121149-4121841 (Clockwise)
Preceding gene: 160876607
Following gene: 160876609
Centisome position: 77.07
GC content: 48.34
Gene sequence:
>693_bases ATGAAACAGCACCCAATTATCTTCAACACCGAAATGGTGCGTGCCATTCTTGATGGCCGTAAAACACAGACGCGCAGAAT GTTTAAAGCTCAGCCGCATGATGATTGGGCGCCATTTTCTAAAAATGCCGAATGGTATACGCCGACAATCATTGATAAGC GCGGATTCTATCAAGCCGCAAATGATGAGGTTTTTGGCGTTAGCGATGAAGATTGCGCGTTTATTTCACCGTTCGGCACG CTTGGTGATCAGCTGTGGGTGCGTGAGGCAATGACCAAAGCACACTGGCCTGATCTGCATTATGTCTGTGGCGGATTAAC GGCAGGCACGGGTGATGAAGACTTTGATTATCGTGGCGCTGAATATCGCGGGTTTATTCCCTCTATCCATATGCCACGCT GGGCGGCGCGCATTCTGCTGGAAGTCACTGCCGTTCGGATAGAAAGGCTAAATGATATCAGCGAGCAAGATGCAAAAGCA GAAGGTTTGCAATATAGCTCCGTTTACCAACAATGGGGCGGAGTTGAAAAGCATTCAAGCCATAAGCCTCATTCGCCTCA TTGGCGTTGGTATAAAAACCCACAACATGCTTTTAAGTCCCTATGGAACTCAATCTATGAAAATTGGGATGCCAACCCGT GGGTGTGGGTTATCGAGTTTAAGGTGATCAGCACCACAGGCGGTGCAGCATGA
Upstream 100 bases:
>100_bases AGCGCCATCAACGTGAGGGCCGAATGAATGAGCGTCACCCCAGCATGGAAGACGCGATTAACAAGGTAAGGAAGCAATAC CCATGTGACGAGGTGGCAGC
Downstream 100 bases:
>100_bases ACCACTTACTCCCGGGCTTTGAATCACAAGAGCGCGTTGCGTTATTGCTGTCGCTCACCCGCATTAGTTCACCCGAGATG ATTGCCGCATTAACGCTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MKQHPIIFNTEMVRAILDGRKTQTRRMFKAQPHDDWAPFSKNAEWYTPTIIDKRGFYQAANDEVFGVSDEDCAFISPFGT LGDQLWVREAMTKAHWPDLHYVCGGLTAGTGDEDFDYRGAEYRGFIPSIHMPRWAARILLEVTAVRIERLNDISEQDAKA EGLQYSSVYQQWGGVEKHSSHKPHSPHWRWYKNPQHAFKSLWNSIYENWDANPWVWVIEFKVISTTGGAA
Sequences:
>Translated_230_residues MKQHPIIFNTEMVRAILDGRKTQTRRMFKAQPHDDWAPFSKNAEWYTPTIIDKRGFYQAANDEVFGVSDEDCAFISPFGT LGDQLWVREAMTKAHWPDLHYVCGGLTAGTGDEDFDYRGAEYRGFIPSIHMPRWAARILLEVTAVRIERLNDISEQDAKA EGLQYSSVYQQWGGVEKHSSHKPHSPHWRWYKNPQHAFKSLWNSIYENWDANPWVWVIEFKVISTTGGAA >Mature_230_residues MKQHPIIFNTEMVRAILDGRKTQTRRMFKAQPHDDWAPFSKNAEWYTPTIIDKRGFYQAANDEVFGVSDEDCAFISPFGT LGDQLWVREAMTKAHWPDLHYVCGGLTAGTGDEDFDYRGAEYRGFIPSIHMPRWAARILLEVTAVRIERLNDISEQDAKA EGLQYSSVYQQWGGVEKHSSHKPHSPHWRWYKNPQHAFKSLWNSIYENWDANPWVWVIEFKVISTTGGAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26621; Mature: 26621
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: PS00496 PII_GLNB_UMP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQHPIIFNTEMVRAILDGRKTQTRRMFKAQPHDDWAPFSKNAEWYTPTIIDKRGFYQAA CCCCCEEECHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC NDEVFGVSDEDCAFISPFGTLGDQLWVREAMTKAHWPDLHYVCGGLTAGTGDEDFDYRGA CCCEECCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCC EYRGFIPSIHMPRWAARILLEVTAVRIERLNDISEQDAKAEGLQYSSVYQQWGGVEKHSS CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCC HKPHSPHWRWYKNPQHAFKSLWNSIYENWDANPWVWVIEFKVISTTGGAA CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCC >Mature Secondary Structure MKQHPIIFNTEMVRAILDGRKTQTRRMFKAQPHDDWAPFSKNAEWYTPTIIDKRGFYQAA CCCCCEEECHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC NDEVFGVSDEDCAFISPFGTLGDQLWVREAMTKAHWPDLHYVCGGLTAGTGDEDFDYRGA CCCEECCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCC EYRGFIPSIHMPRWAARILLEVTAVRIERLNDISEQDAKAEGLQYSSVYQQWGGVEKHSS CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCC HKPHSPHWRWYKNPQHAFKSLWNSIYENWDANPWVWVIEFKVISTTGGAA CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA