| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160876606
Identifier: 160876606
GI number: 160876606
Start: 4120137
End: 4120766
Strand: Direct
Name: 160876606
Synonym: Sbal195_3500
Alternate gene names: NA
Gene position: 4120137-4120766 (Clockwise)
Preceding gene: 160876605
Following gene: 160876607
Centisome position: 77.05
GC content: 50.16
Gene sequence:
>630_bases ATGAACCACCCGACGAGAGAGTCATTTTTAAGCGATGTGGCCGAACATCAACTCACCATTCTTAAAGATGATGGTGTGTT CCGTCACATGGAACTTAGCCAAGGCAGCTTTGAGCATCGCTTTGAGATCACCACATGGCCGCAGCATCTGTGCATCAGTG GCGATATGGGCTGTTACGTATTTTCTCGGGTTCAGGACATGTTTTGCTTCTTTCGCCAAAGCGGTGATGACTGGGGTGTG AATGCGAGTTACTGGGAAGAAAAGGTTCTGGCTGAGTGTAAGACCGACGGCACTCGCGAGTTTGATGCCAAAGAAGCCGA TCAACGCCTTGAGCAGTTTTTGCAGTGGTTTATTGAAGGGCTGGACCCAACGAACGAAGAAGAGGCTGAGGCGATTAACA GCGCGACCAATGCCGTTAAGGAGTTTACCCAAAACCGCGAAAACGCCGAGTGGGATGTGGTTTATCGCCTCAATAATTGG GATGAAGAAGAGGCAGGCGGCATGACATTGGATGATTTTTGGGATGGCTGGAAAGACCCCTTCACCTATCGCTTTATCTG GTGCTGTTACGCCATCGTTTTTGCCATCCGCCAATACGACGAAGCGACCCAAAGCAAGGAGGCAGCATGA
Upstream 100 bases:
>100_bases CAAGGTGAACCCCAAAACCAAGAAACCCATCATCAATCTGGTGGTGTTTAACGGCGAAGCCGCAGCTTAGCCCTGCTGAT TCAAAAGGAAGGAATAGCGT
Downstream 100 bases:
>100_bases GCAACGAACATGATTTTTACGCCAAACATTACCCTTGGCTCAATGCAGATCAACGTGAGTGTTTTGATTTCCTTTGTGAC ATTCACAACGGCGGCAATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MNHPTRESFLSDVAEHQLTILKDDGVFRHMELSQGSFEHRFEITTWPQHLCISGDMGCYVFSRVQDMFCFFRQSGDDWGV NASYWEEKVLAECKTDGTREFDAKEADQRLEQFLQWFIEGLDPTNEEEAEAINSATNAVKEFTQNRENAEWDVVYRLNNW DEEEAGGMTLDDFWDGWKDPFTYRFIWCCYAIVFAIRQYDEATQSKEAA
Sequences:
>Translated_209_residues MNHPTRESFLSDVAEHQLTILKDDGVFRHMELSQGSFEHRFEITTWPQHLCISGDMGCYVFSRVQDMFCFFRQSGDDWGV NASYWEEKVLAECKTDGTREFDAKEADQRLEQFLQWFIEGLDPTNEEEAEAINSATNAVKEFTQNRENAEWDVVYRLNNW DEEEAGGMTLDDFWDGWKDPFTYRFIWCCYAIVFAIRQYDEATQSKEAA >Mature_209_residues MNHPTRESFLSDVAEHQLTILKDDGVFRHMELSQGSFEHRFEITTWPQHLCISGDMGCYVFSRVQDMFCFFRQSGDDWGV NASYWEEKVLAECKTDGTREFDAKEADQRLEQFLQWFIEGLDPTNEEEAEAINSATNAVKEFTQNRENAEWDVVYRLNNW DEEEAGGMTLDDFWDGWKDPFTYRFIWCCYAIVFAIRQYDEATQSKEAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24589; Mature: 24589
Theoretical pI: Translated: 4.11; Mature: 4.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHPTRESFLSDVAEHQLTILKDDGVFRHMELSQGSFEHRFEITTWPQHLCISGDMGCYV CCCCHHHHHHHHHHHHHEEEEECCCCEEEEECCCCCCCEEEEEECCCCHHEECCCCHHHH FSRVQDMFCFFRQSGDDWGVNASYWEEKVLAECKTDGTREFDAKEADQRLEQFLQWFIEG HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHC LDPTNEEEAEAINSATNAVKEFTQNRENAEWDVVYRLNNWDEEEAGGMTLDDFWDGWKDP CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHCCCCCHHHHHCCCCCC FTYRFIWCCYAIVFAIRQYDEATQSKEAA HHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNHPTRESFLSDVAEHQLTILKDDGVFRHMELSQGSFEHRFEITTWPQHLCISGDMGCYV CCCCHHHHHHHHHHHHHEEEEECCCCEEEEECCCCCCCEEEEEECCCCHHEECCCCHHHH FSRVQDMFCFFRQSGDDWGVNASYWEEKVLAECKTDGTREFDAKEADQRLEQFLQWFIEG HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHC LDPTNEEEAEAINSATNAVKEFTQNRENAEWDVVYRLNNWDEEEAGGMTLDDFWDGWKDP CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHCCCCCHHHHHCCCCCC FTYRFIWCCYAIVFAIRQYDEATQSKEAA HHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA