| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160876599
Identifier: 160876599
GI number: 160876599
Start: 4113533
End: 4114156
Strand: Reverse
Name: 160876599
Synonym: Sbal195_3493
Alternate gene names: NA
Gene position: 4114156-4113533 (Counterclockwise)
Preceding gene: 160876600
Following gene: 160876598
Centisome position: 76.94
GC content: 56.25
Gene sequence:
>624_bases ATGAAAACCCATTCACGTAAAAATGACAGCCGTTTGAATTTGTTGATGAAAACGATTCATCGGGTGTTGGAGTTACCCAA GATGACACGCTTTGCGCTGGCGATAGATGTTGTTGCGGCGGTTGAGCGCCTTGGGCTAAGTGAGGTGCTGGCGGCGGAGG GCATTAGCTTTGCCAGCAGTCAAGACGTGCACAACGATGCGCGGATTAATGCCCAAAAGCTGTTCCGTTGGCTTGGTCAG TACGAGGGCCAACATCCGCAGGCGGATCGCCTGTTTCATGTTGAGCAAGCACTGGTGGCGGCATTGCCCGAACATTTGCG GGTGCAGTATCTCAACGATGTGTTTGGTTGCACTGGGGTGACGGTGATTGCCGACCGCATGAGTGACGGCCATGTGTTGC ATGTGGCCGATATGGCGGCATCGCTCACTAAAGAGAACGCCGAGGCGCAAGTGGCGGTGATCCATTTGGGTGCGGCACCG AAGCGCGAGCAGTTAGTGGCAGCGCACCGTGAGTTAAAAGAGTCGGCGGCGACCACGCAAGCCAGCATGGCAGCGTTAGA GCTGGCGTATCCGTATTTAGCGAGTCATGGCGGCAAGGCGGCGCAATACGCGGCCGAGAAGTGA
Upstream 100 bases:
>100_bases GATGGTGAGCTCAAGGCGACTGAGTTGCCGTTAATGAGCCCTGAGCATGTCGCTTAATACCGAACCGTTATAACACGTTA ACAGAGAGAGGCTTATTAGC
Downstream 100 bases:
>100_bases CCGCGATGCCGCAATCGAACCTTAACATCAATGTTATTGCCCGCGCTAAGACTGAGTTGCACCAGCAGTTGGTCCGCTTG GGCGACATGATCGGCGACGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MKTHSRKNDSRLNLLMKTIHRVLELPKMTRFALAIDVVAAVERLGLSEVLAAEGISFASSQDVHNDARINAQKLFRWLGQ YEGQHPQADRLFHVEQALVAALPEHLRVQYLNDVFGCTGVTVIADRMSDGHVLHVADMAASLTKENAEAQVAVIHLGAAP KREQLVAAHRELKESAATTQASMAALELAYPYLASHGGKAAQYAAEK
Sequences:
>Translated_207_residues MKTHSRKNDSRLNLLMKTIHRVLELPKMTRFALAIDVVAAVERLGLSEVLAAEGISFASSQDVHNDARINAQKLFRWLGQ YEGQHPQADRLFHVEQALVAALPEHLRVQYLNDVFGCTGVTVIADRMSDGHVLHVADMAASLTKENAEAQVAVIHLGAAP KREQLVAAHRELKESAATTQASMAALELAYPYLASHGGKAAQYAAEK >Mature_207_residues MKTHSRKNDSRLNLLMKTIHRVLELPKMTRFALAIDVVAAVERLGLSEVLAAEGISFASSQDVHNDARINAQKLFRWLGQ YEGQHPQADRLFHVEQALVAALPEHLRVQYLNDVFGCTGVTVIADRMSDGHVLHVADMAASLTKENAEAQVAVIHLGAAP KREQLVAAHRELKESAATTQASMAALELAYPYLASHGGKAAQYAAEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22639; Mature: 22639
Theoretical pI: Translated: 7.43; Mature: 7.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTHSRKNDSRLNLLMKTIHRVLELPKMTRFALAIDVVAAVERLGLSEVLAAEGISFASS CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCC QDVHNDARINAQKLFRWLGQYEGQHPQADRLFHVEQALVAALPEHLRVQYLNDVFGCTGV CCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH TVIADRMSDGHVLHVADMAASLTKENAEAQVAVIHLGAAPKREQLVAAHRELKESAATTQ HHHHCCCCCCCEEEHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH ASMAALELAYPYLASHGGKAAQYAAEK HHHHHHHHHHHHHHHCCCCHHHHCCCC >Mature Secondary Structure MKTHSRKNDSRLNLLMKTIHRVLELPKMTRFALAIDVVAAVERLGLSEVLAAEGISFASS CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCC QDVHNDARINAQKLFRWLGQYEGQHPQADRLFHVEQALVAALPEHLRVQYLNDVFGCTGV CCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH TVIADRMSDGHVLHVADMAASLTKENAEAQVAVIHLGAAPKREQLVAAHRELKESAATTQ HHHHCCCCCCCEEEHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH ASMAALELAYPYLASHGGKAAQYAAEK HHHHHHHHHHHHHHHCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA