| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876586
Identifier: 160876586
GI number: 160876586
Start: 4102414
End: 4102869
Strand: Reverse
Name: 160876586
Synonym: Sbal195_3480
Alternate gene names: NA
Gene position: 4102869-4102414 (Counterclockwise)
Preceding gene: 160876587
Following gene: 160876583
Centisome position: 76.73
GC content: 43.42
Gene sequence:
>456_bases ATGGAAGTCAGAAAATCTTCGAGATTATTTATCGTAGATAGCGAAGGACGCCTTTTATTATTTTTATACAAGGACGAGCA TCAAGCACCATTCTGGGCAACCGCTGGCGGCGAGCTTAAAACAGGAGAAAGCTACACTGACGCCGCCGCACGGGAGCTAT ACGAGGAAACTGGACTTACTCTAAAAATTGGACATCTTCTGAAAGAGCGAGATGAAGTATATGCTGTAGCACGCTCAACA CCTGCGCGCTGGCTAGAAAAATACTATCTAGTAGAGTGCCCAATAAATTCAAATATATTCGCGGCAGAATGGACCGACGA AGAAAAGTGCACCATTCAAAAATGGAAATGGTGGAGTATTCAAGAAATGCAAAATGAGAACCCAAACATATTCAAACCAA AGTGGATTCCTGAGCTTTTGAGTGCAGTATTGAGCCAACGCCAACATTGCGCCTAA
Upstream 100 bases:
>100_bases CATCGTGGCCTGCGGCCGCTGGACTCGCAACAAGTTGCTCGCCGTTTAGGCGAGCGTTAGGCACAATCTAATCAAAGTAC ATATTTCACTTGGAGCAGAA
Downstream 100 bases:
>100_bases CAAGCGTTCTGACTATTTAGTCTTAAATCGTGCCGTAAATCACTCTGACCCAGACTGATTCATGCTACCCCTCGTGCCCC TTTGCGCGATTCTGGGGCGT
Product: NUDIX hydrolase
Products: NA
Alternate protein names: Nudix Hydrolase; MutT-Like Protein; NTP Pyrophosphohydrolase; Mutator MutT Protein; MutT/Nudix-Family Hydrolase; Hydrolase NUDIX Family
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MEVRKSSRLFIVDSEGRLLLFLYKDEHQAPFWATAGGELKTGESYTDAAARELYEETGLTLKIGHLLKERDEVYAVARST PARWLEKYYLVECPINSNIFAAEWTDEEKCTIQKWKWWSIQEMQNENPNIFKPKWIPELLSAVLSQRQHCA
Sequences:
>Translated_151_residues MEVRKSSRLFIVDSEGRLLLFLYKDEHQAPFWATAGGELKTGESYTDAAARELYEETGLTLKIGHLLKERDEVYAVARST PARWLEKYYLVECPINSNIFAAEWTDEEKCTIQKWKWWSIQEMQNENPNIFKPKWIPELLSAVLSQRQHCA >Mature_151_residues MEVRKSSRLFIVDSEGRLLLFLYKDEHQAPFWATAGGELKTGESYTDAAARELYEETGLTLKIGHLLKERDEVYAVARST PARWLEKYYLVECPINSNIFAAEWTDEEKCTIQKWKWWSIQEMQNENPNIFKPKWIPELLSAVLSQRQHCA
Specific function: Unknown
COG id: COG1051
COG function: function code F; ADP-ribose pyrophosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17670; Mature: 17670
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVRKSSRLFIVDSEGRLLLFLYKDEHQAPFWATAGGELKTGESYTDAAARELYEETGLT CCCCCCCEEEEEECCCCEEEEEEECCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCE LKIGHLLKERDEVYAVARSTPARWLEKYYLVECPINSNIFAAEWTDEEKCTIQKWKWWSI EEEHHHHHHHHHEEEECCCCHHHHHHCEEEEECCCCCCEEEEECCCCCCEEEEEECCCCH QEMQNENPNIFKPKWIPELLSAVLSQRQHCA HHHCCCCCCEECCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MEVRKSSRLFIVDSEGRLLLFLYKDEHQAPFWATAGGELKTGESYTDAAARELYEETGLT CCCCCCCEEEEEECCCCEEEEEEECCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCE LKIGHLLKERDEVYAVARSTPARWLEKYYLVECPINSNIFAAEWTDEEKCTIQKWKWWSI EEEHHHHHHHHHEEEECCCCHHHHHHCEEEEECCCCCCEEEEECCCCCCEEEEEECCCCH QEMQNENPNIFKPKWIPELLSAVLSQRQHCA HHHCCCCCCEECCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA