| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876537
Identifier: 160876537
GI number: 160876537
Start: 4049691
End: 4050509
Strand: Reverse
Name: 160876537
Synonym: Sbal195_3431
Alternate gene names: NA
Gene position: 4050509-4049691 (Counterclockwise)
Preceding gene: 160876538
Following gene: 160876536
Centisome position: 75.75
GC content: 46.15
Gene sequence:
>819_bases ATGAAATTACGTCTTATTGCATTACTTAGCACACTTTGTATTAGCCCGTTGGCAAGCAGCCACGACAGATGGATTTTACC TAGCCACTTTAACGTTTCGGCCGAAAGCCAAGAAGCTGTGTGGATAACCTCTGATGTGTCTGCCAGCAATCAAGTGTTTA TGATGGATAAACCTTTCAGCGCCAGTGACGTACGTGTGTTACTGCCTAATGGCGAGACAAGCTCTCCAAGCTCAAGTTAT ACCGGCGGCCGTAAGTCGGTATTTGATGTGCAGTTAATGCAAGATGGCACGTATAAGTTCGAGAAAGAAGTTACGCCGCG TTATTTCTCCCGCTATAAAGTGAAAGGCAAAGAAGGCTTTGTCCGCAGTCGTTTAGATAAAAAAGCGACCGCAGCTGTCA TGCCAAAGGGCGCCTCTGAATTAGAAGGTTCTTTAAATGTGTCGCGGGTGGAAACCTACGTAACCCGAAATAAACCGACG GATAAGGTTTTGGCTCCTAAGGGCGAGTACTTGGAACTAGTCCCTGTAACCCATCCAGCGGATATCGTTGAAAATGAACC CGCCACATTGCAGTTTGTTTATGACGGCAAACCCATTGCAGGAGTGAGTGTTGCGATTATGAAAGACGGTAGCCTATACC GAAACAAGCCAGAAGAAATTGCTTTAACCTCAGATAAAGACGGTAAAGTGGCCATGACCTTGCCTGCGGCAGGACGTTAT CTTTTGCATGCATCTATTGAACGTCCAAGCTCAGACACATCCCTTGCCGATAAAACCGTCAGTGAGATTTTCCTTACGTT TGAAGCTGGACTTGAATAG
Upstream 100 bases:
>100_bases TGAAACCGGCGTTATCGACATACGCTTAAGTGGCATGGCTCGCTGAGCCTGCTACTGAATATATTGCCAGTACATTACTC GTTAAACTTAAGGAAAAGGC
Downstream 100 bases:
>100_bases GATTCAGTCTTCCGCTCAAGTGAGTAAGCGTTATAAGTGACTCGTTATAAATGATTTAGCGTTATAAATGACGTAGCGTT CACCGTTAAATGCCCACAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MKLRLIALLSTLCISPLASSHDRWILPSHFNVSAESQEAVWITSDVSASNQVFMMDKPFSASDVRVLLPNGETSSPSSSY TGGRKSVFDVQLMQDGTYKFEKEVTPRYFSRYKVKGKEGFVRSRLDKKATAAVMPKGASELEGSLNVSRVETYVTRNKPT DKVLAPKGEYLELVPVTHPADIVENEPATLQFVYDGKPIAGVSVAIMKDGSLYRNKPEEIALTSDKDGKVAMTLPAAGRY LLHASIERPSSDTSLADKTVSEIFLTFEAGLE
Sequences:
>Translated_272_residues MKLRLIALLSTLCISPLASSHDRWILPSHFNVSAESQEAVWITSDVSASNQVFMMDKPFSASDVRVLLPNGETSSPSSSY TGGRKSVFDVQLMQDGTYKFEKEVTPRYFSRYKVKGKEGFVRSRLDKKATAAVMPKGASELEGSLNVSRVETYVTRNKPT DKVLAPKGEYLELVPVTHPADIVENEPATLQFVYDGKPIAGVSVAIMKDGSLYRNKPEEIALTSDKDGKVAMTLPAAGRY LLHASIERPSSDTSLADKTVSEIFLTFEAGLE >Mature_272_residues MKLRLIALLSTLCISPLASSHDRWILPSHFNVSAESQEAVWITSDVSASNQVFMMDKPFSASDVRVLLPNGETSSPSSSY TGGRKSVFDVQLMQDGTYKFEKEVTPRYFSRYKVKGKEGFVRSRLDKKATAAVMPKGASELEGSLNVSRVETYVTRNKPT DKVLAPKGEYLELVPVTHPADIVENEPATLQFVYDGKPIAGVSVAIMKDGSLYRNKPEEIALTSDKDGKVAMTLPAAGRY LLHASIERPSSDTSLADKTVSEIFLTFEAGLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29845; Mature: 29845
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLRLIALLSTLCISPLASSHDRWILPSHFNVSAESQEAVWITSDVSASNQVFMMDKPFS CEEHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCC ASDVRVLLPNGETSSPSSSYTGGRKSVFDVQLMQDGTYKFEKEVTPRYFSRYKVKGKEGF CCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCEEECCCCCHHHHHEEEECCCCCH VRSRLDKKATAAVMPKGASELEGSLNVSRVETYVTRNKPTDKVLAPKGEYLELVPVTHPA HHHHHHHHHHEEECCCCHHHHCCCCCHHHEEEEEECCCCCCCEECCCCCEEEEEECCCCH DIVENEPATLQFVYDGKPIAGVSVAIMKDGSLYRNKPEEIALTSDKDGKVAMTLPAAGRY HHHCCCCCEEEEEECCCCCCCEEEEEEECCCHHCCCCCEEEEECCCCCEEEEEECCCCEE LLHASIERPSSDTSLADKTVSEIFLTFEAGLE EEEEECCCCCCCCHHHHHHHHHEEEEEECCCC >Mature Secondary Structure MKLRLIALLSTLCISPLASSHDRWILPSHFNVSAESQEAVWITSDVSASNQVFMMDKPFS CEEHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCC ASDVRVLLPNGETSSPSSSYTGGRKSVFDVQLMQDGTYKFEKEVTPRYFSRYKVKGKEGF CCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCEEECCCCCHHHHHEEEECCCCCH VRSRLDKKATAAVMPKGASELEGSLNVSRVETYVTRNKPTDKVLAPKGEYLELVPVTHPA HHHHHHHHHHEEECCCCHHHHCCCCCHHHEEEEEECCCCCCCEECCCCCEEEEEECCCCH DIVENEPATLQFVYDGKPIAGVSVAIMKDGSLYRNKPEEIALTSDKDGKVAMTLPAAGRY HHHCCCCCEEEEEECCCCCCCEEEEEEECCCHHCCCCCEEEEECCCCCEEEEEECCCCEE LLHASIERPSSDTSLADKTVSEIFLTFEAGLE EEEEECCCCCCCCHHHHHHHHHEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA