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The map label for this gene is intA [C]

Identifier: 160876497

GI number: 160876497

Start: 4012121

End: 4013389

Strand: Reverse

Name: intA [C]

Synonym: Sbal195_3391

Alternate gene names: 160876497

Gene position: 4013389-4012121 (Counterclockwise)

Preceding gene: 160876498

Following gene: 160876496

Centisome position: 75.05

GC content: 53.03

Gene sequence:

>1269_bases
ATGGCGCAGATTGTGACAGCAACAGGCGTAGAGCAAGGCAAGTTAAACGATGCAGTATTGCGCCGTTGGTTACGGGCAGG
GATAACGCGGGACTTTCGGGACACGCAGTTTCCGGCGGTGCGGTTACGGGCCTCGACCGATAGACGCCAAGCCTCGGTGT
ATTTAGTGATGAACGAAGCGGGCAAAACCGTGTGGCAAAAGCAGGGTGTGTGGCCCGTGATGTGCTTGAAGACCTTTTTA
ACCGAGTTACCCAGTCTGTTAGCCAAACGCAGCATGGGCCAAACGGTAATCAGCAACGAATTTACCACCGTCGCGCAATT
GCTGGCGTGGTTTGTCACCCATGTGGAATGCAATCGCACCTTAAGCAACAGCTGGCGCAGTAACTGTAAATCGTTGGTGA
GTAAACATCTCAGCGGCTGCTTTGGTGAGTTACCACTCAATGAGCTGAACTTTATTGCAGTGGACAGTTATTTAATCAAA
CCCATGTTGGCGCAGGGCTACTCGGCCAATTACATCAAAGCGGCGGTGAAAGTGTTAAAGCGGGCGTTATCGGTCGCGGC
CGACTTACGAGTGTTAGACACCAATAGCTTGGCGGGGTATCGGGTGCAAATGAGTTTGAAGATGCCGCCTTTGGTGGGCA
CGCAATTAAGCGAGTCGGACGTGGGCCCGTTATTCAGTGCATTGCGAAATGCAGTAAGACCGGTGGCGATGCTGTTTGTG
TTGATGCTGATGTTCGGTACCCGCATAGGTGAAACCCGTTTAGCACGTTGGGACCACTTTGCCGGCGATTATTGGTTTAT
TCCCGCCGAGAATGCCAAGAACCGCCAAGAGCACCGATTGCCCATGACGCCCACGGCCAAGAAGCTCATTACCCATTACG
CACAGTGGCAATACACGCATGTGGGCAAGCGGGCGTTTTTGTTCCCAGGTGAAGTAGGGCCGGTGAGCATTCGCACCGCG
CAATATTGGAGTGAAACGATTCGGTTTAAGGCGTTTACCTCCCATGCACTGCGCAAACTGTGCCGCACCATTATTGCCGA
CATGGGCGTAGATACCATGGTCGGTGAGCGGATTTTGAATCACACCTTGCCGCTACTGCTGCGCACGTACGTTAACAGCA
CCTTAGATAAGGGCATGTTGATGGCGTTGGATGCCTACCATGCACACTTAATCACACTGGGGTTTGATGATGTGGCGCCC
GAGATTATGCGCCAATCGACCACTGAGCCGAGTGAGCCAGACGAGCCAATGTTAGTGGGGTGGTTATGA

Upstream 100 bases:

>100_bases
AGCGTTAAGTGCGCGGTTTCGGGATATGCCGATGAACCAGCGGGTGAAGCGGATACGCTCGGGTACCCATCACACCTTTG
AATATCGGTTGGAGGGCTAG

Downstream 100 bases:

>100_bases
CAATGACAATTAGAACAACTAGAACAACTGTGTTATGGCCTGAGTACAGGAGGATTTATGGCTAATCGCGCCGCGGATGT
ATTGAAAGTAGGGCGCCGTT

Product: integrase family protein

Products: NA

Alternate protein names: Integrase Family Protein; Phage Integrase Family Protein; Phage Family Integrase

Number of amino acids: Translated: 422; Mature: 421

Protein sequence:

>422_residues
MAQIVTATGVEQGKLNDAVLRRWLRAGITRDFRDTQFPAVRLRASTDRRQASVYLVMNEAGKTVWQKQGVWPVMCLKTFL
TELPSLLAKRSMGQTVISNEFTTVAQLLAWFVTHVECNRTLSNSWRSNCKSLVSKHLSGCFGELPLNELNFIAVDSYLIK
PMLAQGYSANYIKAAVKVLKRALSVAADLRVLDTNSLAGYRVQMSLKMPPLVGTQLSESDVGPLFSALRNAVRPVAMLFV
LMLMFGTRIGETRLARWDHFAGDYWFIPAENAKNRQEHRLPMTPTAKKLITHYAQWQYTHVGKRAFLFPGEVGPVSIRTA
QYWSETIRFKAFTSHALRKLCRTIIADMGVDTMVGERILNHTLPLLLRTYVNSTLDKGMLMALDAYHAHLITLGFDDVAP
EIMRQSTTEPSEPDEPMLVGWL

Sequences:

>Translated_422_residues
MAQIVTATGVEQGKLNDAVLRRWLRAGITRDFRDTQFPAVRLRASTDRRQASVYLVMNEAGKTVWQKQGVWPVMCLKTFL
TELPSLLAKRSMGQTVISNEFTTVAQLLAWFVTHVECNRTLSNSWRSNCKSLVSKHLSGCFGELPLNELNFIAVDSYLIK
PMLAQGYSANYIKAAVKVLKRALSVAADLRVLDTNSLAGYRVQMSLKMPPLVGTQLSESDVGPLFSALRNAVRPVAMLFV
LMLMFGTRIGETRLARWDHFAGDYWFIPAENAKNRQEHRLPMTPTAKKLITHYAQWQYTHVGKRAFLFPGEVGPVSIRTA
QYWSETIRFKAFTSHALRKLCRTIIADMGVDTMVGERILNHTLPLLLRTYVNSTLDKGMLMALDAYHAHLITLGFDDVAP
EIMRQSTTEPSEPDEPMLVGWL
>Mature_421_residues
AQIVTATGVEQGKLNDAVLRRWLRAGITRDFRDTQFPAVRLRASTDRRQASVYLVMNEAGKTVWQKQGVWPVMCLKTFLT
ELPSLLAKRSMGQTVISNEFTTVAQLLAWFVTHVECNRTLSNSWRSNCKSLVSKHLSGCFGELPLNELNFIAVDSYLIKP
MLAQGYSANYIKAAVKVLKRALSVAADLRVLDTNSLAGYRVQMSLKMPPLVGTQLSESDVGPLFSALRNAVRPVAMLFVL
MLMFGTRIGETRLARWDHFAGDYWFIPAENAKNRQEHRLPMTPTAKKLITHYAQWQYTHVGKRAFLFPGEVGPVSIRTAQ
YWSETIRFKAFTSHALRKLCRTIIADMGVDTMVGERILNHTLPLLLRTYVNSTLDKGMLMALDAYHAHLITLGFDDVAPE
IMRQSTTEPSEPDEPMLVGWL

Specific function: Integrase Is Necessary For Integration Of The Phage Into The Host Genome By Site-Specific Recombination. In Conjunction With Excisionase, Integrase Is Also Necessary For Excision Of The Prophage From The Host Genome. [C]

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47582; Mature: 47451

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQIVTATGVEQGKLNDAVLRRWLRAGITRDFRDTQFPAVRLRASTDRRQASVYLVMNEA
CCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEECC
GKTVWQKQGVWPVMCLKTFLTELPSLLAKRSMGQTVISNEFTTVAQLLAWFVTHVECNRT
CHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LSNSWRSNCKSLVSKHLSGCFGELPLNELNFIAVDSYLIKPMLAQGYSANYIKAAVKVLK
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHH
RALSVAADLRVLDTNSLAGYRVQMSLKMPPLVGTQLSESDVGPLFSALRNAVRPVAMLFV
HHHHHHHHHEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LMLMFGTRIGETRLARWDHFAGDYWFIPAENAKNRQEHRLPMTPTAKKLITHYAQWQYTH
HHHHHCCCCCHHHHHHHHCCCCCEEEEECCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHC
VGKRAFLFPGEVGPVSIRTAQYWSETIRFKAFTSHALRKLCRTIIADMGVDTMVGERILN
CCCEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
HTLPLLLRTYVNSTLDKGMLMALDAYHAHLITLGFDDVAPEIMRQSTTEPSEPDEPMLVG
HHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEECCHHHHHHHHHHCCCCCCCCCCCEEEE
WL
CC
>Mature Secondary Structure 
AQIVTATGVEQGKLNDAVLRRWLRAGITRDFRDTQFPAVRLRASTDRRQASVYLVMNEA
CCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEECC
GKTVWQKQGVWPVMCLKTFLTELPSLLAKRSMGQTVISNEFTTVAQLLAWFVTHVECNRT
CHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LSNSWRSNCKSLVSKHLSGCFGELPLNELNFIAVDSYLIKPMLAQGYSANYIKAAVKVLK
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHH
RALSVAADLRVLDTNSLAGYRVQMSLKMPPLVGTQLSESDVGPLFSALRNAVRPVAMLFV
HHHHHHHHHEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LMLMFGTRIGETRLARWDHFAGDYWFIPAENAKNRQEHRLPMTPTAKKLITHYAQWQYTH
HHHHHCCCCCHHHHHHHHCCCCCEEEEECCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHC
VGKRAFLFPGEVGPVSIRTAQYWSETIRFKAFTSHALRKLCRTIIADMGVDTMVGERILN
CCCEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
HTLPLLLRTYVNSTLDKGMLMALDAYHAHLITLGFDDVAPEIMRQSTTEPSEPDEPMLVG
HHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEECCHHHHHHHHHHCCCCCCCCCCCEEEE
WL
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA