| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876481
Identifier: 160876481
GI number: 160876481
Start: 3987628
End: 3988989
Strand: Reverse
Name: 160876481
Synonym: Sbal195_3375
Alternate gene names: NA
Gene position: 3988989-3987628 (Counterclockwise)
Preceding gene: 160876482
Following gene: 160876480
Centisome position: 74.6
GC content: 44.42
Gene sequence:
>1362_bases ATGGAATTAACTTTAAGCGATGCGCTTGCCGATTATATCGCTCAGCGTAAGCAAACTAAGCTTGAACCGCTACAAAAAGC ACGGGATAAGATGCTTGAAAAAACACAGGAGCCTATCGAAATAGCAACAGCAAATAGGGAATATGCTGAAGCTGCTGCAC CGATTGAGGCGGATTTTAATCCGGTGAATTGGTTAACTGATGCTGCAAAACGCGCCAAACAGATTAGTCTAGCAACCCAT GCGGCTAAGTTTACCCACAGTGATGCTAAAGCCAGCAGTATATTGGTAGCGGATACTGCGCCAGAATCGCAGACCTATCT GAACACGGCGAGTCTAGCGAATAAAGCGATAGATGCTGTCGGTAATGCGGCGGCACTTGATGTGGCAAAACTGCTGAAAA TATCAGTCAATGGCGAAAGTCTCATCAAGCAGCTACAAGCTCAGCATGTCGATGCTTTAACTGCATTTACTCAAGATACT GAATTACTTAAAGAGTGGCAGCTTGGATTTGCTAGAGCATTGGCAGATGAAAAACTAACGGGACATACCTTAACTAAGCA ATTGTACTTTCCAGTATCAACGGCGCTTAATGGCGATGAATCACAACACTATCACTTACTGTGTCCTTTGTTTTCTTCAT CCTTAGCCCATGAGTTATATCATCACGTCACATCAACTCGTTTTGGCGATGAGCCCAAAGCAATTAGAGAGGCGCGTAAA AAAGGTCATTATCACGCATCGCTCGAGAAGATATTCCCGGCAACAGCAGTGCAAAACTTTGGTGGCTCAAAACCACAAAA TATCTCTCAACTTAATAGCGAGCGGTATGGACAAAGTTTCTTACTCAATTGCGCGCCACCGCATTATCAAGCTCAAAGCA AGCCGCCGCTCACGAGTGCCAGTATTTTTAGCCGCCAATTGCGGTTTAAAACCGCAGGTTTTATTCGCGAATTTAAAGCG TTTTTGGCTGGGGTAACCGCGCAAGAAAACAATTTTAAAGCGCGATATCAACGGGATTATGGTTTTGTGTTGCCAATTAT CGATGTGCTACTTAATGAGGCCGCCATTATTCAAAATATGACGGAATTTGCAGGTTGGGCAACGTCGGCTGAGTGTCAAT TAAAAACCGCGCACGGTCTTTGGCTCGATGTCGCCAACCCAGAACCTCGTTTTCAGCAGGAGCGTGCCAAAGGCGATTGG CAAGACATCATCGCCAACGATTTTGCGACTTGGTTATTGGCTCAGCTGCAAAATAAAGAACGATATGTGCTAGGTGATAT TGAACATCAGTATGTTAAGAAATTATGTCTAGTGCAGCTTAAAACCTTTGAGCGTCATACACCTAAACATGGAGATGCAT AG
Upstream 100 bases:
>100_bases AGATTAACCTTCGAATGGCAAATAAAGATCAACCCGCCCTAGTGTGGGCATGGCACGAACAACTTGGTGTGTACGAATGT AAAGACAATAAGGACAGCCC
Downstream 100 bases:
>100_bases AATGTCGCAGTATTTATTAGTTAAAAAACTCGATGTGCAAAATGCGAATGCCATTGCAGGGTTGACCTATGGGTTTCCGG CGATAACGAATTTTTTAGGT
Product: CRISPR-associated Csy1 family protein
Products: NA
Alternate protein names: CRISPR-Associated Csy1 Family Protein; Csy1 Family CRISPR-Associated Protein
Number of amino acids: Translated: 453; Mature: 453
Protein sequence:
>453_residues MELTLSDALADYIAQRKQTKLEPLQKARDKMLEKTQEPIEIATANREYAEAAAPIEADFNPVNWLTDAAKRAKQISLATH AAKFTHSDAKASSILVADTAPESQTYLNTASLANKAIDAVGNAAALDVAKLLKISVNGESLIKQLQAQHVDALTAFTQDT ELLKEWQLGFARALADEKLTGHTLTKQLYFPVSTALNGDESQHYHLLCPLFSSSLAHELYHHVTSTRFGDEPKAIREARK KGHYHASLEKIFPATAVQNFGGSKPQNISQLNSERYGQSFLLNCAPPHYQAQSKPPLTSASIFSRQLRFKTAGFIREFKA FLAGVTAQENNFKARYQRDYGFVLPIIDVLLNEAAIIQNMTEFAGWATSAECQLKTAHGLWLDVANPEPRFQQERAKGDW QDIIANDFATWLLAQLQNKERYVLGDIEHQYVKKLCLVQLKTFERHTPKHGDA
Sequences:
>Translated_453_residues MELTLSDALADYIAQRKQTKLEPLQKARDKMLEKTQEPIEIATANREYAEAAAPIEADFNPVNWLTDAAKRAKQISLATH AAKFTHSDAKASSILVADTAPESQTYLNTASLANKAIDAVGNAAALDVAKLLKISVNGESLIKQLQAQHVDALTAFTQDT ELLKEWQLGFARALADEKLTGHTLTKQLYFPVSTALNGDESQHYHLLCPLFSSSLAHELYHHVTSTRFGDEPKAIREARK KGHYHASLEKIFPATAVQNFGGSKPQNISQLNSERYGQSFLLNCAPPHYQAQSKPPLTSASIFSRQLRFKTAGFIREFKA FLAGVTAQENNFKARYQRDYGFVLPIIDVLLNEAAIIQNMTEFAGWATSAECQLKTAHGLWLDVANPEPRFQQERAKGDW QDIIANDFATWLLAQLQNKERYVLGDIEHQYVKKLCLVQLKTFERHTPKHGDA >Mature_453_residues MELTLSDALADYIAQRKQTKLEPLQKARDKMLEKTQEPIEIATANREYAEAAAPIEADFNPVNWLTDAAKRAKQISLATH AAKFTHSDAKASSILVADTAPESQTYLNTASLANKAIDAVGNAAALDVAKLLKISVNGESLIKQLQAQHVDALTAFTQDT ELLKEWQLGFARALADEKLTGHTLTKQLYFPVSTALNGDESQHYHLLCPLFSSSLAHELYHHVTSTRFGDEPKAIREARK KGHYHASLEKIFPATAVQNFGGSKPQNISQLNSERYGQSFLLNCAPPHYQAQSKPPLTSASIFSRQLRFKTAGFIREFKA FLAGVTAQENNFKARYQRDYGFVLPIIDVLLNEAAIIQNMTEFAGWATSAECQLKTAHGLWLDVANPEPRFQQERAKGDW QDIIANDFATWLLAQLQNKERYVLGDIEHQYVKKLCLVQLKTFERHTPKHGDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50589; Mature: 50589
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELTLSDALADYIAQRKQTKLEPLQKARDKMLEKTQEPIEIATANREYAEAAAPIEADFN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHCCCCCCCCC PVNWLTDAAKRAKQISLATHAAKFTHSDAKASSILVADTAPESQTYLNTASLANKAIDAV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH GNAAALDVAKLLKISVNGESLIKQLQAQHVDALTAFTQDTELLKEWQLGFARALADEKLT CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GHTLTKQLYFPVSTALNGDESQHYHLLCPLFSSSLAHELYHHVTSTRFGDEPKAIREARK CHHHHHHHHCCHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH KGHYHASLEKIFPATAVQNFGGSKPQNISQLNSERYGQSFLLNCAPPHYQAQSKPPLTSA CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHH SIFSRQLRFKTAGFIREFKAFLAGVTAQENNFKARYQRDYGFVLPIIDVLLNEAAIIQNM HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHH TEFAGWATSAECQLKTAHGLWLDVANPEPRFQQERAKGDWQDIIANDFATWLLAQLQNKE HHHHCCCCCCCEEEEECCCEEEECCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC RYVLGDIEHQYVKKLCLVQLKTFERHTPKHGDA CEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MELTLSDALADYIAQRKQTKLEPLQKARDKMLEKTQEPIEIATANREYAEAAAPIEADFN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHCCCCCCCCC PVNWLTDAAKRAKQISLATHAAKFTHSDAKASSILVADTAPESQTYLNTASLANKAIDAV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH GNAAALDVAKLLKISVNGESLIKQLQAQHVDALTAFTQDTELLKEWQLGFARALADEKLT CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GHTLTKQLYFPVSTALNGDESQHYHLLCPLFSSSLAHELYHHVTSTRFGDEPKAIREARK CHHHHHHHHCCHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH KGHYHASLEKIFPATAVQNFGGSKPQNISQLNSERYGQSFLLNCAPPHYQAQSKPPLTSA CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHH SIFSRQLRFKTAGFIREFKAFLAGVTAQENNFKARYQRDYGFVLPIIDVLLNEAAIIQNM HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHH TEFAGWATSAECQLKTAHGLWLDVANPEPRFQQERAKGDWQDIIANDFATWLLAQLQNKE HHHHCCCCCCCEEEEECCCEEEECCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC RYVLGDIEHQYVKKLCLVQLKTFERHTPKHGDA CEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA