| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160876456
Identifier: 160876456
GI number: 160876456
Start: 3953793
End: 3953969
Strand: Direct
Name: 160876456
Synonym: Sbal195_3350
Alternate gene names: NA
Gene position: 3953793-3953969 (Clockwise)
Preceding gene: 160876454
Following gene: 160876457
Centisome position: 73.94
GC content: 46.33
Gene sequence:
>177_bases ATGACAAAGCCAAACATACAAACACCTACATCAGAGAAATCCACGCGCAAAAATGAATTAAAAGCGCTCGGGTTCATCAT CTTTTTACTCTTCCCCGCGCTCACTATCGCAGGGATCAGTATTTACGGCTTCATCATTTGGATGATCCAAGCCTTCGGCG GCGTTGTCGGCCACTAA
Upstream 100 bases:
>100_bases ATATATTGTCAAACCCCATTCATCACAGCATGCAAGTCCATTCATATCTCCCCTCTATAGTACTCCTATCAAAAATCGCT TTCGATCGGAGTCGACCCCA
Downstream 100 bases:
>100_bases TTTATATCTATTTAACATATAGTTACTTTTTGAGGACGCGATTATGAAGTGGTTAACCAACCTCTGGCGCACACTGAACA AACCCACCAAAGCGCTGACC
Product: trimethylamine N-oxide reductase system, TorE protein
Products: NA
Alternate protein names: WARNINIG rE Protein; Trimethylamine N-Oxide Reductase System rE Protein; RE Protein
Number of amino acids: Translated: 58; Mature: 57
Protein sequence:
>58_residues MTKPNIQTPTSEKSTRKNELKALGFIIFLLFPALTIAGISIYGFIIWMIQAFGGVVGH
Sequences:
>Translated_58_residues MTKPNIQTPTSEKSTRKNELKALGFIIFLLFPALTIAGISIYGFIIWMIQAFGGVVGH >Mature_57_residues TKPNIQTPTSEKSTRKNELKALGFIIFLLFPALTIAGISIYGFIIWMIQAFGGVVGH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6382; Mature: 6251
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKPNIQTPTSEKSTRKNELKALGFIIFLLFPALTIAGISIYGFIIWMIQAFGGVVGH CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TKPNIQTPTSEKSTRKNELKALGFIIFLLFPALTIAGISIYGFIIWMIQAFGGVVGH CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA