The gene/protein map for NC_009997 is currently unavailable.
Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

Click here to switch to the map view.

The map label for this gene is yhbT [H]

Identifier: 160876445

GI number: 160876445

Start: 3938989

End: 3939522

Strand: Reverse

Name: yhbT [H]

Synonym: Sbal195_3339

Alternate gene names: 160876445

Gene position: 3939522-3938989 (Counterclockwise)

Preceding gene: 160876448

Following gene: 160876441

Centisome position: 73.67

GC content: 47.0

Gene sequence:

>534_bases
ATGTCCGCTGTTTTATCCGCAAAAATCGCTCAACAACTTTTAGAATTCACTCCAAAAGCCATCGGCTTTCCCCTCGCTAA
GATGCCTTTTAGTTTCAAAGCGAAAGCCATCAGCCAATTACTTGGGCTGTTACTCGCCGAACAAGCGGCAGACGATGAAC
TCGGATTTCTGACTGATAAATGGGTTGCGATTCGAGTGGAAGACTTAAACCTGGCCTTTGAGGTGAGTTTTAATGGCAAG
TGGCAAGTCAGAGCGTTAACCGATGCGCAGGTGACCTTTAGTGCCAACTCAGCCGAACTCATACTCGTGGCAGCAGCAAA
GGAAGATCCTGATACGCTATTCTTTCAGCGTAAGTTGAATATTGAAGGCGATACAGAATTAGGGCTCGAAGTGAAAAACC
TGCTGCTCAGCATCGAATTTGCCAGTATGCCGACCCCAATTCGCCTCAGCATTGCAAAACTCGCCGCAGTGATTGAGCGT
CTGCAAATCGAAGCAAAACCAACGGTTATCCTCGCTAAGTCTCCAAGTTATTGA

Upstream 100 bases:

>100_bases
GGTAAGATTGAATGGCGATGAATTGATTTAAAACAGGTTTAAGATCATAAAATCCCGATAAACTGGGATATATATGTTTT
ATTCTTGTAGGGTTCCCGCC

Downstream 100 bases:

>100_bases
TCAAGTGATTAATGCCATTTCGCGGGATTGGCTTCTGAATAAACCACTAAAAAGCCCACTAAGTTGTTACCTTAGTGGGC
TTAAGTGTGAGTCAAAACTC

Product: sterol-binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MSAVLSAKIAQQLLEFTPKAIGFPLAKMPFSFKAKAISQLLGLLLAEQAADDELGFLTDKWVAIRVEDLNLAFEVSFNGK
WQVRALTDAQVTFSANSAELILVAAAKEDPDTLFFQRKLNIEGDTELGLEVKNLLLSIEFASMPTPIRLSIAKLAAVIER
LQIEAKPTVILAKSPSY

Sequences:

>Translated_177_residues
MSAVLSAKIAQQLLEFTPKAIGFPLAKMPFSFKAKAISQLLGLLLAEQAADDELGFLTDKWVAIRVEDLNLAFEVSFNGK
WQVRALTDAQVTFSANSAELILVAAAKEDPDTLFFQRKLNIEGDTELGLEVKNLLLSIEFASMPTPIRLSIAKLAAVIER
LQIEAKPTVILAKSPSY
>Mature_176_residues
SAVLSAKIAQQLLEFTPKAIGFPLAKMPFSFKAKAISQLLGLLLAEQAADDELGFLTDKWVAIRVEDLNLAFEVSFNGKW
QVRALTDAQVTFSANSAELILVAAAKEDPDTLFFQRKLNIEGDTELGLEVKNLLLSIEFASMPTPIRLSIAKLAAVIERL
QIEAKPTVILAKSPSY

Specific function: Unknown

COG id: COG3154

COG function: function code I; Putative lipid carrier protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789547, Length=153, Percent_Identity=41.1764705882353, Blast_Score=124, Evalue=5e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003033
- InterPro:   IPR016830 [H]

Pfam domain/function: PF02036 SCP2 [H]

EC number: NA

Molecular weight: Translated: 19363; Mature: 19232

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAVLSAKIAQQLLEFTPKAIGFPLAKMPFSFKAKAISQLLGLLLAEQAADDELGFLTDK
CCCHHHHHHHHHHHHHCCHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEECC
WVAIRVEDLNLAFEVSFNGKWQVRALTDAQVTFSANSAELILVAAAKEDPDTLFFQRKLN
EEEEEEEECEEEEEEEECCEEEEEEEECCEEEEECCCCEEEEEEECCCCCCEEEEEEEEC
IEGDTELGLEVKNLLLSIEFASMPTPIRLSIAKLAAVIERLQIEAKPTVILAKSPSY
CCCCCCCCCEEHHHEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC
>Mature Secondary Structure 
SAVLSAKIAQQLLEFTPKAIGFPLAKMPFSFKAKAISQLLGLLLAEQAADDELGFLTDK
CCHHHHHHHHHHHHHCCHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEECC
WVAIRVEDLNLAFEVSFNGKWQVRALTDAQVTFSANSAELILVAAAKEDPDTLFFQRKLN
EEEEEEEECEEEEEEEECCEEEEEEEECCEEEEECCCCEEEEEEECCCCCCEEEEEEEEC
IEGDTELGLEVKNLLLSIEFASMPTPIRLSIAKLAAVIERLQIEAKPTVILAKSPSY
CCCCCCCCCEEHHHEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]