| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yhbT [H]
Identifier: 160876445
GI number: 160876445
Start: 3938989
End: 3939522
Strand: Reverse
Name: yhbT [H]
Synonym: Sbal195_3339
Alternate gene names: 160876445
Gene position: 3939522-3938989 (Counterclockwise)
Preceding gene: 160876448
Following gene: 160876441
Centisome position: 73.67
GC content: 47.0
Gene sequence:
>534_bases ATGTCCGCTGTTTTATCCGCAAAAATCGCTCAACAACTTTTAGAATTCACTCCAAAAGCCATCGGCTTTCCCCTCGCTAA GATGCCTTTTAGTTTCAAAGCGAAAGCCATCAGCCAATTACTTGGGCTGTTACTCGCCGAACAAGCGGCAGACGATGAAC TCGGATTTCTGACTGATAAATGGGTTGCGATTCGAGTGGAAGACTTAAACCTGGCCTTTGAGGTGAGTTTTAATGGCAAG TGGCAAGTCAGAGCGTTAACCGATGCGCAGGTGACCTTTAGTGCCAACTCAGCCGAACTCATACTCGTGGCAGCAGCAAA GGAAGATCCTGATACGCTATTCTTTCAGCGTAAGTTGAATATTGAAGGCGATACAGAATTAGGGCTCGAAGTGAAAAACC TGCTGCTCAGCATCGAATTTGCCAGTATGCCGACCCCAATTCGCCTCAGCATTGCAAAACTCGCCGCAGTGATTGAGCGT CTGCAAATCGAAGCAAAACCAACGGTTATCCTCGCTAAGTCTCCAAGTTATTGA
Upstream 100 bases:
>100_bases GGTAAGATTGAATGGCGATGAATTGATTTAAAACAGGTTTAAGATCATAAAATCCCGATAAACTGGGATATATATGTTTT ATTCTTGTAGGGTTCCCGCC
Downstream 100 bases:
>100_bases TCAAGTGATTAATGCCATTTCGCGGGATTGGCTTCTGAATAAACCACTAAAAAGCCCACTAAGTTGTTACCTTAGTGGGC TTAAGTGTGAGTCAAAACTC
Product: sterol-binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MSAVLSAKIAQQLLEFTPKAIGFPLAKMPFSFKAKAISQLLGLLLAEQAADDELGFLTDKWVAIRVEDLNLAFEVSFNGK WQVRALTDAQVTFSANSAELILVAAAKEDPDTLFFQRKLNIEGDTELGLEVKNLLLSIEFASMPTPIRLSIAKLAAVIER LQIEAKPTVILAKSPSY
Sequences:
>Translated_177_residues MSAVLSAKIAQQLLEFTPKAIGFPLAKMPFSFKAKAISQLLGLLLAEQAADDELGFLTDKWVAIRVEDLNLAFEVSFNGK WQVRALTDAQVTFSANSAELILVAAAKEDPDTLFFQRKLNIEGDTELGLEVKNLLLSIEFASMPTPIRLSIAKLAAVIER LQIEAKPTVILAKSPSY >Mature_176_residues SAVLSAKIAQQLLEFTPKAIGFPLAKMPFSFKAKAISQLLGLLLAEQAADDELGFLTDKWVAIRVEDLNLAFEVSFNGKW QVRALTDAQVTFSANSAELILVAAAKEDPDTLFFQRKLNIEGDTELGLEVKNLLLSIEFASMPTPIRLSIAKLAAVIERL QIEAKPTVILAKSPSY
Specific function: Unknown
COG id: COG3154
COG function: function code I; Putative lipid carrier protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789547, Length=153, Percent_Identity=41.1764705882353, Blast_Score=124, Evalue=5e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003033 - InterPro: IPR016830 [H]
Pfam domain/function: PF02036 SCP2 [H]
EC number: NA
Molecular weight: Translated: 19363; Mature: 19232
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVLSAKIAQQLLEFTPKAIGFPLAKMPFSFKAKAISQLLGLLLAEQAADDELGFLTDK CCCHHHHHHHHHHHHHCCHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEECC WVAIRVEDLNLAFEVSFNGKWQVRALTDAQVTFSANSAELILVAAAKEDPDTLFFQRKLN EEEEEEEECEEEEEEEECCEEEEEEEECCEEEEECCCCEEEEEEECCCCCCEEEEEEEEC IEGDTELGLEVKNLLLSIEFASMPTPIRLSIAKLAAVIERLQIEAKPTVILAKSPSY CCCCCCCCCEEHHHEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC >Mature Secondary Structure SAVLSAKIAQQLLEFTPKAIGFPLAKMPFSFKAKAISQLLGLLLAEQAADDELGFLTDK CCHHHHHHHHHHHHHCCHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEECC WVAIRVEDLNLAFEVSFNGKWQVRALTDAQVTFSANSAELILVAAAKEDPDTLFFQRKLN EEEEEEEECEEEEEEEECCEEEEEEEECCEEEEECCCCEEEEEEECCCCCCEEEEEEEEC IEGDTELGLEVKNLLLSIEFASMPTPIRLSIAKLAAVIERLQIEAKPTVILAKSPSY CCCCCCCCCEEHHHEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]