| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is pgpA [H]
Identifier: 160876403
GI number: 160876403
Start: 3888913
End: 3889407
Strand: Reverse
Name: pgpA [H]
Synonym: Sbal195_3297
Alternate gene names: 160876403
Gene position: 3889407-3888913 (Counterclockwise)
Preceding gene: 160876404
Following gene: 160876400
Centisome position: 72.74
GC content: 47.47
Gene sequence:
>495_bases ATGAAATGGTTGTCAAAGGATCAGGCGTTAACGCGCCTGTCATTAAAAAATCCTGTCCACTTTTTGGCACTCGGTTTCGG TAGCGGACTCGCCGCTAAAGCGCCCGGTACTTTCGGTACCATAGCTGCTATTCCCCTCTATTTACTGATGGCGCCATTAC CGCTTGCTTGGTATATCGGCTTAACTTTAGTGAGTGTATTTGCAGGATTTTATATCTGTGGTAAAGCGGCACATGACATG GGCGTACACGACCATGGCGCGATTGTGTGGGATGAAGTGGCTGGACTGTTGATCACTATGATAGCGGCACCAGCGGGCTG GATTTGGCTGTTAGTGGGCTTTGGTTTATTTCGCTTTTTTGACATCATCAAACCTTGGCCAATCCGTTGGCTCGATGCTA AAGTCGAAGGTGGTTTTGGCATTATGATTGACGATGTTTTAGCGGGTGTATTTGCCTTTATCTGTCTGCAAGGGCTAGTC TGGTGTGTTAGCTAA
Upstream 100 bases:
>100_bases AGTTTGTTCGTGTTGGGCAAATTTGTGCGGGCAGTAAGCTCAAGTTGCAACTCAATGGTGAGCCGTTTACGCCTCCATAT CATGGTTTCGAGCACTTCTA
Downstream 100 bases:
>100_bases CATGATAGCTAACTTGGCATGATAGTTAGCATGGCCAACAATTACCCCTTACTTTTGATTTTGCATTTTTCTGATTGAAG CTTGATTGAAGGGATGAAGG
Product: phosphatidylglycerophosphatase A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MKWLSKDQALTRLSLKNPVHFLALGFGSGLAAKAPGTFGTIAAIPLYLLMAPLPLAWYIGLTLVSVFAGFYICGKAAHDM GVHDHGAIVWDEVAGLLITMIAAPAGWIWLLVGFGLFRFFDIIKPWPIRWLDAKVEGGFGIMIDDVLAGVFAFICLQGLV WCVS
Sequences:
>Translated_164_residues MKWLSKDQALTRLSLKNPVHFLALGFGSGLAAKAPGTFGTIAAIPLYLLMAPLPLAWYIGLTLVSVFAGFYICGKAAHDM GVHDHGAIVWDEVAGLLITMIAAPAGWIWLLVGFGLFRFFDIIKPWPIRWLDAKVEGGFGIMIDDVLAGVFAFICLQGLV WCVS >Mature_164_residues MKWLSKDQALTRLSLKNPVHFLALGFGSGLAAKAPGTFGTIAAIPLYLLMAPLPLAWYIGLTLVSVFAGFYICGKAAHDM GVHDHGAIVWDEVAGLLITMIAAPAGWIWLLVGFGLFRFFDIIKPWPIRWLDAKVEGGFGIMIDDVLAGVFAFICLQGLV WCVS
Specific function: One of the three phospholipid phosphatases, specifically hydrolyzes phosphatidylglycerophosphate [H]
COG id: COG1267
COG function: function code I; Phosphatidylglycerophosphatase A and related proteins
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786620, Length=148, Percent_Identity=52.7027027027027, Blast_Score=159, Evalue=8e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007686 [H]
Pfam domain/function: PF04608 PgpA [H]
EC number: =3.1.3.27 [H]
Molecular weight: Translated: 17792; Mature: 17792
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWLSKDQALTRLSLKNPVHFLALGFGSGLAAKAPGTFGTIAAIPLYLLMAPLPLAWYIG CCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LTLVSVFAGFYICGKAAHDMGVHDHGAIVWDEVAGLLITMIAAPAGWIWLLVGFGLFRFF HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH DIIKPWPIRWLDAKVEGGFGIMIDDVLAGVFAFICLQGLVWCVS HHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKWLSKDQALTRLSLKNPVHFLALGFGSGLAAKAPGTFGTIAAIPLYLLMAPLPLAWYIG CCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LTLVSVFAGFYICGKAAHDMGVHDHGAIVWDEVAGLLITMIAAPAGWIWLLVGFGLFRFF HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH DIIKPWPIRWLDAKVEGGFGIMIDDVLAGVFAFICLQGLVWCVS HHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2846510; 9278503 [H]