| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160876314
Identifier: 160876314
GI number: 160876314
Start: 3776938
End: 3778188
Strand: Reverse
Name: 160876314
Synonym: Sbal195_3208
Alternate gene names: NA
Gene position: 3778188-3776938 (Counterclockwise)
Preceding gene: 160876315
Following gene: 160876313
Centisome position: 70.66
GC content: 47.0
Gene sequence:
>1251_bases ATGAAAAATATCGCCATCGTCGGCACCGGCATTTCTGGATTAACCTGCGGCCATCTATTAAGCGAGTCGCATAAGGTCAC AGTGTTTGAAGCCAATGACTATATCGGCGGCCACACGGCGACAGTCGATGTGGAGCACCAAGGCCAAACCTACGCTATAG ACACAGGTTTTATCGTGTTTAATGACAGAACCTATCCACGATTTGAGCGTTTATTGGCTCGCCTTAACGTGACCATATTA CCGACTGAGATGAGTTTCAGCGTCCATAATGCGCTGACAGGGCTTGAATATAACGGCCACAATTTAGGGAGTTTGTTTGC CCAAAAGCGTAACCTGCTGAATCCGCGCTTTTGGGCCTTTTTAAAAGAAATTCTACGCTTCAATAAAGGCTGTAAGGCAC TCTATCAACAGGATATTTACCCTGAAGGCAACTTAGGTGATTATTTAGACAGTGAAAACTTTTCGCGCTTTTTTGCCGAG CACTATATTTTGCCCATGGGCGCGGCAATTTGGTCTTCGAGCATAGAAGATATGCGTGCGTTTTCGTTGAAGTTTTTTAT TCGCTTCTTCCAGCACCACGGTTTATTAAATGTCAGTGATAGGCCCCAGTGGTATGTGCTAAAAGGCGGCTCGCGCAGCT ATATTCCAGATCTTATTGCGCCCTTTAAAGACAATATTCGCCTAAACTCCCCCGTGACAGGTATTGAACGCCATGGCAAT GGGGTGAAGTTACAAGTCCACGGTGAATGGTTGGAATTTGATGAGGTGATTTTAGCCTGCCATAGCGATCAAGCACTGCG GATGTTAAACGACCCCACGCCAACAGAACGTGCCATTTTAGGCGATCTTAGCTACCAGAATAACGATGTGGTGCTACACA CGGATACCAGCATCTTACCGAAGCGAAAAGTGGCTTGGGCGAGTTGGAATTATCGGCTTGACGGCAATCTAAAACGTCCA GCGTCAGTGACTTACAACATGAACATACTGCAGCAGTTGCCAGCCTCCGCGCCGACATTTTGTGTCACTTTAAATCAGTC TGAGTTGATTGATGAGGCGAAAGTAATACGCCGCTTCAATTATGCCCACCCAGTGTTTAACGAAGCTAGCCTTAAGGCGC AGGGCCGCCGTGAGGAAATATCCGGGCAAAATCATACCCATTTTGCTGGAGCTTATTGGCACAATGGTTTCCATGAAGAT GGTGTTCGCAGTGCACTGGATGTATGCGCCCATTTTGGTGTCAGCCTATGA
Upstream 100 bases:
>100_bases TTACTTATCTATTGAAATTGATGTCGTTTTTACCTGCCTTTGTGTGGCAAAAAATGATTGCAAACGATACTCAAGCCAAG CCGCTTAAGGACAAGAGTTT
Downstream 100 bases:
>100_bases CCGATGTAAATGTGACAAGCTTAAATATGACAGAGCTCAATAGCGGCATTTATTACGGCACTGTATCTCACAGCCGATTT ACGCCGATTAAACACAGCTT
Product: amine oxidase
Products: NA
Alternate protein names: FAD Dependent Oxidoreductase; Amine Oxidase Flavin-Containing; Dehydrogenase; Amine Oxidoreductase; Flavin Containing Amine Oxidoreductase; Flavin-Containing Amine Oxidase; Amino-Oxidase; Oxidoreductase; Amine Oxidase Flavin-Containing Superfamily; FAD-Dependent Oxidoreductase; Amino Oxidase; Flavin Containing Amine Oxidoreductase Protein; Amine Oxidase Flavin-Containing Protein; Amine Oxidase Protein; Amine OxidaseFAD Dependent Oxidoreductase; Amine-Oxidase; Fad Dependent Oxidoreductase; Flavin Containing Amine Oxidoreductas; Lipoprotein
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MKNIAIVGTGISGLTCGHLLSESHKVTVFEANDYIGGHTATVDVEHQGQTYAIDTGFIVFNDRTYPRFERLLARLNVTIL PTEMSFSVHNALTGLEYNGHNLGSLFAQKRNLLNPRFWAFLKEILRFNKGCKALYQQDIYPEGNLGDYLDSENFSRFFAE HYILPMGAAIWSSSIEDMRAFSLKFFIRFFQHHGLLNVSDRPQWYVLKGGSRSYIPDLIAPFKDNIRLNSPVTGIERHGN GVKLQVHGEWLEFDEVILACHSDQALRMLNDPTPTERAILGDLSYQNNDVVLHTDTSILPKRKVAWASWNYRLDGNLKRP ASVTYNMNILQQLPASAPTFCVTLNQSELIDEAKVIRRFNYAHPVFNEASLKAQGRREEISGQNHTHFAGAYWHNGFHED GVRSALDVCAHFGVSL
Sequences:
>Translated_416_residues MKNIAIVGTGISGLTCGHLLSESHKVTVFEANDYIGGHTATVDVEHQGQTYAIDTGFIVFNDRTYPRFERLLARLNVTIL PTEMSFSVHNALTGLEYNGHNLGSLFAQKRNLLNPRFWAFLKEILRFNKGCKALYQQDIYPEGNLGDYLDSENFSRFFAE HYILPMGAAIWSSSIEDMRAFSLKFFIRFFQHHGLLNVSDRPQWYVLKGGSRSYIPDLIAPFKDNIRLNSPVTGIERHGN GVKLQVHGEWLEFDEVILACHSDQALRMLNDPTPTERAILGDLSYQNNDVVLHTDTSILPKRKVAWASWNYRLDGNLKRP ASVTYNMNILQQLPASAPTFCVTLNQSELIDEAKVIRRFNYAHPVFNEASLKAQGRREEISGQNHTHFAGAYWHNGFHED GVRSALDVCAHFGVSL >Mature_416_residues MKNIAIVGTGISGLTCGHLLSESHKVTVFEANDYIGGHTATVDVEHQGQTYAIDTGFIVFNDRTYPRFERLLARLNVTIL PTEMSFSVHNALTGLEYNGHNLGSLFAQKRNLLNPRFWAFLKEILRFNKGCKALYQQDIYPEGNLGDYLDSENFSRFFAE HYILPMGAAIWSSSIEDMRAFSLKFFIRFFQHHGLLNVSDRPQWYVLKGGSRSYIPDLIAPFKDNIRLNSPVTGIERHGN GVKLQVHGEWLEFDEVILACHSDQALRMLNDPTPTERAILGDLSYQNNDVVLHTDTSILPKRKVAWASWNYRLDGNLKRP ASVTYNMNILQQLPASAPTFCVTLNQSELIDEAKVIRRFNYAHPVFNEASLKAQGRREEISGQNHTHFAGAYWHNGFHED GVRSALDVCAHFGVSL
Specific function: Unknown
COG id: COG2907
COG function: function code R; Predicted NAD/FAD-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47135; Mature: 47135
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNIAIVGTGISGLTCGHLLSESHKVTVFEANDYIGGHTATVDVEHQGQTYAIDTGFIVF CCCEEEEECCCCCHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEECCCCEEEEEEEEEEE NDRTYPRFERLLARLNVTILPTEMSFSVHNALTGLEYNGHNLGSLFAQKRNLLNPRFWAF CCCCCHHHHHHHHHCCCEEEECCCCEEHHHHHCCCEECCCCHHHHHHHHHHCCCHHHHHH LKEILRFNKGCKALYQQDIYPEGNLGDYLDSENFSRFFAEHYILPMGAAIWSSSIEDMRA HHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHCCHHHHHH FSLKFFIRFFQHHGLLNVSDRPQWYVLKGGSRSYIPDLIAPFKDNIRLNSPVTGIERHGN HHHHHHHHHHHHCCEEEECCCCCEEEEECCCCCCCCHHHCCCCCCEEECCCCCCHHCCCC GVKLQVHGEWLEFDEVILACHSDQALRMLNDPTPTERAILGDLSYQNNDVVLHTDTSILP EEEEEECCCCCCCCEEEEEECCCHHHHHHCCCCCCHHHEEECCCCCCCCEEEEECCCCCC KRKVAWASWNYRLDGNLKRPASVTYNMNILQQLPASAPTFCVTLNQSELIDEAKVIRRFN CCEEEEEEEEEEECCCCCCCCEEEECHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHC YAHPVFNEASLKAQGRREEISGQNHTHFAGAYWHNGFHEDGVRSALDVCAHFGVSL CCCCCCCCCCCCCCCCHHHCCCCCCCEEEEEHHCCCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKNIAIVGTGISGLTCGHLLSESHKVTVFEANDYIGGHTATVDVEHQGQTYAIDTGFIVF CCCEEEEECCCCCHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEECCCCEEEEEEEEEEE NDRTYPRFERLLARLNVTILPTEMSFSVHNALTGLEYNGHNLGSLFAQKRNLLNPRFWAF CCCCCHHHHHHHHHCCCEEEECCCCEEHHHHHCCCEECCCCHHHHHHHHHHCCCHHHHHH LKEILRFNKGCKALYQQDIYPEGNLGDYLDSENFSRFFAEHYILPMGAAIWSSSIEDMRA HHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHCCHHHHHH FSLKFFIRFFQHHGLLNVSDRPQWYVLKGGSRSYIPDLIAPFKDNIRLNSPVTGIERHGN HHHHHHHHHHHHCCEEEECCCCCEEEEECCCCCCCCHHHCCCCCCEEECCCCCCHHCCCC GVKLQVHGEWLEFDEVILACHSDQALRMLNDPTPTERAILGDLSYQNNDVVLHTDTSILP EEEEEECCCCCCCCEEEEEECCCHHHHHHCCCCCCHHHEEECCCCCCCCEEEEECCCCCC KRKVAWASWNYRLDGNLKRPASVTYNMNILQQLPASAPTFCVTLNQSELIDEAKVIRRFN CCEEEEEEEEEEECCCCCCCCEEEECHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHC YAHPVFNEASLKAQGRREEISGQNHTHFAGAYWHNGFHEDGVRSALDVCAHFGVSL CCCCCCCCCCCCCCCCHHHCCCCCCCEEEEEHHCCCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA