| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is yceI [C]
Identifier: 160876304
GI number: 160876304
Start: 3768992
End: 3769567
Strand: Reverse
Name: yceI [C]
Synonym: Sbal195_3198
Alternate gene names: 160876304
Gene position: 3769567-3768992 (Counterclockwise)
Preceding gene: 160876305
Following gene: 160876301
Centisome position: 70.49
GC content: 47.22
Gene sequence:
>576_bases ATGAAAAAGCAACTGTTTAGCGCACTGATTGGTGCATCTCTATTGGCTCCGATGGCGGCTTCAGCGGCGGACTATGTCAT TGACCGTGAAGGAGCACATGCCTCTATTACTTTCAAAGTGAGCCACTTAGGTTATAGCTATGTCGTTGGCCGCTTTAATG ATTTTAGCGGCGACTTTAGCTATGACGCGGCTAAACCCACTGCGGCTAAAGTGAATGTGACTGTAAATACGCTTAGTGTG GATTCAAACCACGCCGAGCGTGACAAGCATATTCGTAGCGCCGATTTCCTAAACACGAGTAAGTTTGCGCAAGCGACGTT TACCTCAACCACAGTTGAAGATAAAGGTAATGGCGACTTAGTGATTAACGGCAACTTAACCTTAAATGGTGTCACTAAGC CATTAGCGATCAATGCCCATGCAGTGGGCGAAGGTCAAGATCCTTGGGGTGGCTACCGTGCCGGTTTTACGGGCACAACC ACGTTTGCGATGAAAGATTTCGGTATCAAAATGGATTTAGGCCCAGCATCAAGCCATGTTGAGTTAGATCTTGTGGTTGA AGGCGTGCGTAAGTAA
Upstream 100 bases:
>100_bases GCACTCGTGGTAATCCACGCAGCAGGTGCGTTAAAGCATCACTTTATCGATAAAGACGCAACTTTACTCAAAATGATTAA ATTTAATCGAGGATAACACA
Downstream 100 bases:
>100_bases CGCTCAGTTATTCTTCACGAGATGAATAAACAAAAAGCGCCGAAAGGCGCTTTTTTGTGGGCTTTATCGTTAAGTGAACG ACAAGAATTAATCTTGGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MKKQLFSALIGASLLAPMAASAADYVIDREGAHASITFKVSHLGYSYVVGRFNDFSGDFSYDAAKPTAAKVNVTVNTLSV DSNHAERDKHIRSADFLNTSKFAQATFTSTTVEDKGNGDLVINGNLTLNGVTKPLAINAHAVGEGQDPWGGYRAGFTGTT TFAMKDFGIKMDLGPASSHVELDLVVEGVRK
Sequences:
>Translated_191_residues MKKQLFSALIGASLLAPMAASAADYVIDREGAHASITFKVSHLGYSYVVGRFNDFSGDFSYDAAKPTAAKVNVTVNTLSV DSNHAERDKHIRSADFLNTSKFAQATFTSTTVEDKGNGDLVINGNLTLNGVTKPLAINAHAVGEGQDPWGGYRAGFTGTT TFAMKDFGIKMDLGPASSHVELDLVVEGVRK >Mature_191_residues MKKQLFSALIGASLLAPMAASAADYVIDREGAHASITFKVSHLGYSYVVGRFNDFSGDFSYDAAKPTAAKVNVTVNTLSV DSNHAERDKHIRSADFLNTSKFAQATFTSTTVEDKGNGDLVINGNLTLNGVTKPLAINAHAVGEGQDPWGGYRAGFTGTT TFAMKDFGIKMDLGPASSHVELDLVVEGVRK
Specific function: Unknown
COG id: COG2353
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0312 family. Type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787295, Length=191, Percent_Identity=56.020942408377, Blast_Score=226, Evalue=1e-60,
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007372 [H]
Pfam domain/function: PF04264 YceI [H]
EC number: NA
Molecular weight: Translated: 20306; Mature: 20306
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKQLFSALIGASLLAPMAASAADYVIDREGAHASITFKVSHLGYSYVVGRFNDFSGDFS CCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEEEECCCEEEEEECCCCCCCCCC YDAAKPTAAKVNVTVNTLSVDSNHAERDKHIRSADFLNTSKFAQATFTSTTVEDKGNGDL CCCCCCCEEEEEEEEEEEEECCCCCHHHHHCCCCCCCCCCHHHEEEEEEEEECCCCCCCE VINGNLTLNGVTKPLAINAHAVGEGQDPWGGYRAGFTGTTTFAMKDFGIKMDLGPASSHV EEECCEEECCCCCCEEEEEEECCCCCCCCCCEECCCCCCEEEEEEECCEEEECCCCCCCE ELDLVVEGVRK EEEEEEEECCC >Mature Secondary Structure MKKQLFSALIGASLLAPMAASAADYVIDREGAHASITFKVSHLGYSYVVGRFNDFSGDFS CCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEEEECCCEEEEEECCCCCCCCCC YDAAKPTAAKVNVTVNTLSVDSNHAERDKHIRSADFLNTSKFAQATFTSTTVEDKGNGDL CCCCCCCEEEEEEEEEEEEECCCCCHHHHHCCCCCCCCCCHHHEEEEEEEEECCCCCCCE VINGNLTLNGVTKPLAINAHAVGEGQDPWGGYRAGFTGTTTFAMKDFGIKMDLGPASSHV EEECCEEECCCCCCEEEEEEECCCCCCCCCCEECCCCCCEEEEEEECCEEEECCCCCCCE ELDLVVEGVRK EEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA