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The map label for this gene is rodZ [H]

Identifier: 160876255

GI number: 160876255

Start: 3723729

End: 3724814

Strand: Reverse

Name: rodZ [H]

Synonym: Sbal195_3149

Alternate gene names: 160876255

Gene position: 3724814-3723729 (Counterclockwise)

Preceding gene: 160876256

Following gene: 160876254

Centisome position: 69.66

GC content: 49.45

Gene sequence:

>1086_bases
ATGAAAGATCATGAAACCAATGCGCCAGTTGAGTCGGTAGCTCCGCAATCAGTCGCGCTAGATGTAACGCTTGGAACCTT
ATTAAAAGACGCCCGCGAAAAAATGGGCCTTAGCATTCAAGATGCGGCGGTTAAACTGCATCTACGTCCTCGCATTATTG
AAGACATTGAAGCTGACAATTTTACCAATATCGCTTCATCCACTTATGTTCGTGGTTATGTGAAAAACTATGCTCGCATG
GTCAGTGCCGATGCGGCCTTGATTGAAGCGTGTTTAGTGCGGCAAGTGCCGGTGGTGACTGAGCCAGCGATGCAAAGCTT
TTCACGTAAGACGACTTACCAAGCTAGCGATACACGTTTAACTTGGCTGAGTATTTTTATCGTTATTGTGTTACTCGGCT
CGTTAGTCGTCTGGTGGATGCAAAAAACGACCTTGTTAAGCACTATCGATGTGTCACAGCCTACGGCCGAAGAGGTCGCT
GCGGTGAATCAAACGCTGCCCGGTGACGTGCTATTGACCGAAACTGATGCCAGCCAGCAATTGACTGAAATAGCGGCTAA
CGGCTCTATGTCAATCGATGGTCCGATTAAAGATACTGATGCCAGCACTATCGATGTGAGCACAGGGCCTACTGACAACA
ATTATCCTCAAACGACGGATACGAGCAATGAAGATGGTGGCTCAGCTATCGCGGCCACCACAGCGCCGCAAACGGCTGCT
CCCGTAGCTCAACAAACTGTAGTTCAACAACCTGTAGCTCAACAGCCAGTTGCCACCGCAACGCCTTCACCTGCCTCAAC
ATCGCCAGCCACCTCAGTCAACACTCTGGTCGCTGTTGCTGGACAATCAATTATTGATGTTCAGTTAACCGGTGATTGCT
GGATAAACATTGTCGATGCTAAAGGCAAAGCCTTAGTCGATGGTGTGAAAGGCGCTGGCGCTGCAGTGCAAGTGAGCGGT
GTGCCACCGTTTAAAATTATTTTAGGGGCGCCCCATGTGGCGACCTTAAGCTTAGATGGTCAAATGGTTAGCTTAGCGGA
TTTCCCCAAGGGACGTGTCGCACGTTTAACCTTGCCGAGAGCCTAA

Upstream 100 bases:

>100_bases
CAGTGAATGATGATGCCGCTGTGAAGAGATTTGGTATTTTATTGCTTGCCAAATTCCCAGCATCACCTCAGGCCAAGCAA
TACAGAGTTAATTTGCATCA

Downstream 100 bases:

>100_bases
CGACCGCGTAATGATCTGCAGCACGTACCGAAATAGAGCGTATTAAGCATGTATAATGAAACTCCCATAAAAAGACGTCC
TTCCACCCGCATCTATGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MKDHETNAPVESVAPQSVALDVTLGTLLKDAREKMGLSIQDAAVKLHLRPRIIEDIEADNFTNIASSTYVRGYVKNYARM
VSADAALIEACLVRQVPVVTEPAMQSFSRKTTYQASDTRLTWLSIFIVIVLLGSLVVWWMQKTTLLSTIDVSQPTAEEVA
AVNQTLPGDVLLTETDASQQLTEIAANGSMSIDGPIKDTDASTIDVSTGPTDNNYPQTTDTSNEDGGSAIAATTAPQTAA
PVAQQTVVQQPVAQQPVATATPSPASTSPATSVNTLVAVAGQSIIDVQLTGDCWINIVDAKGKALVDGVKGAGAAVQVSG
VPPFKIILGAPHVATLSLDGQMVSLADFPKGRVARLTLPRA

Sequences:

>Translated_361_residues
MKDHETNAPVESVAPQSVALDVTLGTLLKDAREKMGLSIQDAAVKLHLRPRIIEDIEADNFTNIASSTYVRGYVKNYARM
VSADAALIEACLVRQVPVVTEPAMQSFSRKTTYQASDTRLTWLSIFIVIVLLGSLVVWWMQKTTLLSTIDVSQPTAEEVA
AVNQTLPGDVLLTETDASQQLTEIAANGSMSIDGPIKDTDASTIDVSTGPTDNNYPQTTDTSNEDGGSAIAATTAPQTAA
PVAQQTVVQQPVAQQPVATATPSPASTSPATSVNTLVAVAGQSIIDVQLTGDCWINIVDAKGKALVDGVKGAGAAVQVSG
VPPFKIILGAPHVATLSLDGQMVSLADFPKGRVARLTLPRA
>Mature_361_residues
MKDHETNAPVESVAPQSVALDVTLGTLLKDAREKMGLSIQDAAVKLHLRPRIIEDIEADNFTNIASSTYVRGYVKNYARM
VSADAALIEACLVRQVPVVTEPAMQSFSRKTTYQASDTRLTWLSIFIVIVLLGSLVVWWMQKTTLLSTIDVSQPTAEEVA
AVNQTLPGDVLLTETDASQQLTEIAANGSMSIDGPIKDTDASTIDVSTGPTDNNYPQTTDTSNEDGGSAIAATTAPQTAA
PVAQQTVVQQPVAQQPVATATPSPASTSPATSVNTLVAVAGQSIIDVQLTGDCWINIVDAKGKALVDGVKGAGAAVQVSG
VPPFKIILGAPHVATLSLDGQMVSLADFPKGRVARLTLPRA

Specific function: Cytoskeletal protein that is involved in cell-shape control through regulation of the length of the long axis [H]

COG id: COG1426

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein. Note=Forms helical filaments along the long axis of the cell (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788864, Length=352, Percent_Identity=28.9772727272727, Blast_Score=109, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 37871; Mature: 37871

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDHETNAPVESVAPQSVALDVTLGTLLKDAREKMGLSIQDAAVKLHLRPRIIEDIEADN
CCCCCCCCCHHHCCCCCEEEEEHHHHHHHHHHHHHCCEEEEEEEEEEECCHHHHHCCCCC
FTNIASSTYVRGYVKNYARMVSADAALIEACLVRQVPVVTEPAMQSFSRKTTYQASDTRL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCH
TWLSIFIVIVLLGSLVVWWMQKTTLLSTIDVSQPTAEEVAAVNQTLPGDVLLTETDASQQ
HHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHCCCCCCEEEECCCHHHH
LTEIAANGSMSIDGPIKDTDASTIDVSTGPTDNNYPQTTDTSNEDGGSAIAATTAPQTAA
HHHHHCCCCEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHH
PVAQQTVVQQPVAQQPVATATPSPASTSPATSVNTLVAVAGQSIIDVQLTGDCWINIVDA
HHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCHHHHHHEECCCEEEEEEEECCEEEEEEEC
KGKALVDGVKGAGAAVQVSGVPPFKIILGAPHVATLSLDGQMVSLADFPKGRVARLTLPR
CCCEEECCCCCCCCEEEECCCCCEEEEECCCCEEEEEECCCEEEECCCCCCCEEEEECCC
A
C
>Mature Secondary Structure
MKDHETNAPVESVAPQSVALDVTLGTLLKDAREKMGLSIQDAAVKLHLRPRIIEDIEADN
CCCCCCCCCHHHCCCCCEEEEEHHHHHHHHHHHHHCCEEEEEEEEEEECCHHHHHCCCCC
FTNIASSTYVRGYVKNYARMVSADAALIEACLVRQVPVVTEPAMQSFSRKTTYQASDTRL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCH
TWLSIFIVIVLLGSLVVWWMQKTTLLSTIDVSQPTAEEVAAVNQTLPGDVLLTETDASQQ
HHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHCCCCCCEEEECCCHHHH
LTEIAANGSMSIDGPIKDTDASTIDVSTGPTDNNYPQTTDTSNEDGGSAIAATTAPQTAA
HHHHHCCCCEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHH
PVAQQTVVQQPVAQQPVATATPSPASTSPATSVNTLVAVAGQSIIDVQLTGDCWINIVDA
HHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCHHHHHHEECCCEEEEEEEECCEEEEEEEC
KGKALVDGVKGAGAAVQVSGVPPFKIILGAPHVATLSLDGQMVSLADFPKGRVARLTLPR
CCCEEECCCCCCCCEEEECCCCCEEEEECCCCEEEEEECCCEEEECCCCCCCEEEEECCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA