| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is flgK [H]
Identifier: 160876197
GI number: 160876197
Start: 3657957
End: 3659882
Strand: Reverse
Name: flgK [H]
Synonym: Sbal195_3091
Alternate gene names: 160876197
Gene position: 3659882-3657957 (Counterclockwise)
Preceding gene: 160876198
Following gene: 160876196
Centisome position: 68.44
GC content: 48.34
Gene sequence:
>1926_bases ATGGCCGTTGATCTGCTGAATATTGCGCGAACTGGGGTGCTTGCCTCCCAGTCGCAACTGGGTGTCACCAGTAATAACAT TGCTAACGCCAATACCGCGGGTTACCACAGACAAGTGGCAACTCAGTCGACTCTAGAATCACAGCGTTTAGGCAATAGCT TTTATGGCACTGGAACTTACGTTAATGACGTTAAGCGTATCTACAATGACTATGCCGCAAGAGAGTTGCGCATTGGCCAA ACAACGCTCAGTGCCGCCGAAGCCAGCTACGGTAAATTGAGTGAACTCGATCAGCTATTTTCACAAATAGGCAAAGTTGT CCCACAAAGCTTAAATAACCTGTTTTCAGGGCTAAATAGCATAGCTGACTTACCAGCAGATTTGGGCATCCGCAGCTCGA CCTTAACGAATGCGCAGCAAGTCGCCAGTAGCCTGAATCAGATGCAGTCTTATTTGAATGGCCAGCTCGATCAGACGAAT GACCAGATAACCGGCATGACCAAGCGTATCAATGAGATAGGTACTGAGCTGGCAAAGTTAAATCTAGAGTTGATGAAGTC GCCGAATCAAGATGCGCAGCTGCTCGATAAGCAAGATGCACTCGTTCAAGAGTTGAGTCAGTACGCCCAAGTGAATGTCA TCCCGCAAGAAAATGGCGCCAAGAGTATCATGCTCGGTGGCTCTGTAATGCTGGTTTCCGGTGAGATTGCCATGAGTATG GGGACTCAAGCGGGCAACCCATTTCCCAAAGAGTTACAGCTTAACTCAAGTATTAGCTCGCAAAGCGTCACTGTTGACCC AAGTAAACTGGGTGGTCAGCTAGGAGCTATGTTTGATTATCGTGACCAGACGTTAATTCCCGCAGGTCATGAGCTTGACC AATTAGCTTTGGGCGTGGCTGATAACTTCAACAAAATGCAAGCGCAAGGCATTGACCTCAATGGGCAAGTCGGCGCCAAT ATCTTCAAAGACATCAATGATCCTATGATGTCCTTAGGCCGTGCAGCCGGTTTTTCTGGTAACACTGGCAATGCAACATT AGGCGTCACCATCGATGACACCAGTCTATTAACTGGTGGTGCCTACGAGCTGTCATTTACCTCGCCTGCCACTTATGAGT TGAGAGATACAGAAACGGGGACGATAACACCGCTGACGTTAACGGGCTCGATATTATCGGGTGGTTCTGGATTTTCAATT GACATAAAAGCAGGCGCTATGGCGTCGGGGGATCGCTTTGCCATTCGCCCGACAGCGGGCGCCTCAAATGGCATTGAAGT TGTCATGAAAGACCCTAAAGGCATTGCCGCCGCATCCCCAAAGATTACCGCAGATGCCGCTAACTCGGGTAATACCCAAG TTAAGTTGACTCAAATTGGCAATCGCAATGCCGCAAATTTCCCTGTGACGGGCAGTGAATTGACAATAAAGCTCGATACC ACAGTGTTGCCACCCACCTATGAAGCATTCGATGCCGCAGGAACATCACTTGGGGCTGCTACAACTTATACCCCACCGAG TATCAGCGCCTTTGGTTTTACCTTCGAAGTAGATAGTACAGCTGCAGCGGGCAATGACAGATTTACCTTCGATTTATCCT TTGCCGAGGGCGATAACTCCAATGCTGTTGCTATGGCTAAATTGAGCGAAAGTAAAGTGATGAATAATGGTAAATCGACC TTAGCGGATGTGTTCGAGAACACTAAGCTCGACATTGGCAGTAAAACGAAAGCGGCCGAAGTGCGTACTGGTTCGGCTGA GGCCGTGTATCAACAAGCTTATGCGCGAGTAGAGAGTGAGTCGGGCGTGAATTTAGATGAAGAAGCAGCAAATTTAATGC GTTTTCAGCAAGCTTATCAAGCCTCTGCGCGGATCATGACGACCGCACAGCAGATTTTTGACACCTTATTATCCTCAGTG CGTTAG
Upstream 100 bases:
>100_bases AAAGTGATGCAGTCCATCAGTGAAGAGCTGAAATCAATTCTGCCAGGAGAAGACAAATGATGAACCTTACAACCCTGTTT GTTCATAGGAGTGTCAACTA
Downstream 100 bases:
>100_bases GAGATTTAACTATGCGATTATCATCCGCGCAGCTCTTTAATCAAAGCATTACCAGTGTGCTGCAAAAGCAAACGGCGACC AGCAAAATTCTTGACCAATT
Product: flagellar hook-associated protein FlgK
Products: NA
Alternate protein names: HAP1 [H]
Number of amino acids: Translated: 641; Mature: 640
Protein sequence:
>641_residues MAVDLLNIARTGVLASQSQLGVTSNNIANANTAGYHRQVATQSTLESQRLGNSFYGTGTYVNDVKRIYNDYAARELRIGQ TTLSAAEASYGKLSELDQLFSQIGKVVPQSLNNLFSGLNSIADLPADLGIRSSTLTNAQQVASSLNQMQSYLNGQLDQTN DQITGMTKRINEIGTELAKLNLELMKSPNQDAQLLDKQDALVQELSQYAQVNVIPQENGAKSIMLGGSVMLVSGEIAMSM GTQAGNPFPKELQLNSSISSQSVTVDPSKLGGQLGAMFDYRDQTLIPAGHELDQLALGVADNFNKMQAQGIDLNGQVGAN IFKDINDPMMSLGRAAGFSGNTGNATLGVTIDDTSLLTGGAYELSFTSPATYELRDTETGTITPLTLTGSILSGGSGFSI DIKAGAMASGDRFAIRPTAGASNGIEVVMKDPKGIAAASPKITADAANSGNTQVKLTQIGNRNAANFPVTGSELTIKLDT TVLPPTYEAFDAAGTSLGAATTYTPPSISAFGFTFEVDSTAAAGNDRFTFDLSFAEGDNSNAVAMAKLSESKVMNNGKST LADVFENTKLDIGSKTKAAEVRTGSAEAVYQQAYARVESESGVNLDEEAANLMRFQQAYQASARIMTTAQQIFDTLLSSV R
Sequences:
>Translated_641_residues MAVDLLNIARTGVLASQSQLGVTSNNIANANTAGYHRQVATQSTLESQRLGNSFYGTGTYVNDVKRIYNDYAARELRIGQ TTLSAAEASYGKLSELDQLFSQIGKVVPQSLNNLFSGLNSIADLPADLGIRSSTLTNAQQVASSLNQMQSYLNGQLDQTN DQITGMTKRINEIGTELAKLNLELMKSPNQDAQLLDKQDALVQELSQYAQVNVIPQENGAKSIMLGGSVMLVSGEIAMSM GTQAGNPFPKELQLNSSISSQSVTVDPSKLGGQLGAMFDYRDQTLIPAGHELDQLALGVADNFNKMQAQGIDLNGQVGAN IFKDINDPMMSLGRAAGFSGNTGNATLGVTIDDTSLLTGGAYELSFTSPATYELRDTETGTITPLTLTGSILSGGSGFSI DIKAGAMASGDRFAIRPTAGASNGIEVVMKDPKGIAAASPKITADAANSGNTQVKLTQIGNRNAANFPVTGSELTIKLDT TVLPPTYEAFDAAGTSLGAATTYTPPSISAFGFTFEVDSTAAAGNDRFTFDLSFAEGDNSNAVAMAKLSESKVMNNGKST LADVFENTKLDIGSKTKAAEVRTGSAEAVYQQAYARVESESGVNLDEEAANLMRFQQAYQASARIMTTAQQIFDTLLSSV R >Mature_640_residues AVDLLNIARTGVLASQSQLGVTSNNIANANTAGYHRQVATQSTLESQRLGNSFYGTGTYVNDVKRIYNDYAARELRIGQT TLSAAEASYGKLSELDQLFSQIGKVVPQSLNNLFSGLNSIADLPADLGIRSSTLTNAQQVASSLNQMQSYLNGQLDQTND QITGMTKRINEIGTELAKLNLELMKSPNQDAQLLDKQDALVQELSQYAQVNVIPQENGAKSIMLGGSVMLVSGEIAMSMG TQAGNPFPKELQLNSSISSQSVTVDPSKLGGQLGAMFDYRDQTLIPAGHELDQLALGVADNFNKMQAQGIDLNGQVGANI FKDINDPMMSLGRAAGFSGNTGNATLGVTIDDTSLLTGGAYELSFTSPATYELRDTETGTITPLTLTGSILSGGSGFSID IKAGAMASGDRFAIRPTAGASNGIEVVMKDPKGIAAASPKITADAANSGNTQVKLTQIGNRNAANFPVTGSELTIKLDTT VLPPTYEAFDAAGTSLGAATTYTPPSISAFGFTFEVDSTAAAGNDRFTFDLSFAEGDNSNAVAMAKLSESKVMNNGKSTL ADVFENTKLDIGSKTKAAEVRTGSAEAVYQQAYARVESESGVNLDEEAANLMRFQQAYQASARIMTTAQQIFDTLLSSVR
Specific function: Unknown
COG id: COG1256
COG function: function code N; Flagellar hook-associated protein
Gene ontology:
Cell location: Secreted. Bacterial flagellum (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787323, Length=458, Percent_Identity=27.7292576419214, Blast_Score=148, Evalue=8e-37,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR001444 - InterPro: IPR002371 [H]
Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 67571; Mature: 67440
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: PS00588 FLAGELLA_BB_ROD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVDLLNIARTGVLASQSQLGVTSNNIANANTAGYHRQVATQSTLESQRLGNSFYGTGTY CCEEHHHHHHHCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCH VNDVKRIYNDYAARELRIGQTTLSAAEASYGKLSELDQLFSQIGKVVPQSLNNLFSGLNS HHHHHHHHHHHHHHEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH IADLPADLGIRSSTLTNAQQVASSLNQMQSYLNGQLDQTNDQITGMTKRINEIGTELAKL HHCCCHHCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH NLELMKSPNQDAQLLDKQDALVQELSQYAQVNVIPQENGAKSIMLGGSVMLVSGEIAMSM HHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEECCEEEEEECCCCEEC GTQAGNPFPKELQLNSSISSQSVTVDPSKLGGQLGAMFDYRDQTLIPAGHELDQLALGVA CCCCCCCCCCCEEECCCCCCCEEEECHHHHCCCCCCEEECCCCEECCCCCCHHHHHHHHH DNFNKMQAQGIDLNGQVGANIFKDINDPMMSLGRAAGFSGNTGNATLGVTIDDTSLLTGG CCCCHHHHCCCCCCCCCCHHHHHHCCHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEECC AYELSFTSPATYELRDTETGTITPLTLTGSILSGGSGFSIDIKAGAMASGDRFAIRPTAG EEEEEECCCCEEEEECCCCCEEEEEEEECCEECCCCCEEEEEECCCCCCCCEEEEEECCC ASNGIEVVMKDPKGIAAASPKITADAANSGNTQVKLTQIGNRNAANFPVTGSELTIKLDT CCCCCEEEEECCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEC TVLPPTYEAFDAAGTSLGAATTYTPPSISAFGFTFEVDSTAAAGNDRFTFDLSFAEGDNS EECCCCHHHHHHCCCCCCCCEECCCCCCEEEEEEEEECCCCCCCCCEEEEEEEECCCCCC NAVAMAKLSESKVMNNGKSTLADVFENTKLDIGSKTKAAEVRTGSAEAVYQQAYARVESE CEEEEEECHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHCCC SGVNLDEEAANLMRFQQAYQASARIMTTAQQIFDTLLSSVR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AVDLLNIARTGVLASQSQLGVTSNNIANANTAGYHRQVATQSTLESQRLGNSFYGTGTY CEEHHHHHHHCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCH VNDVKRIYNDYAARELRIGQTTLSAAEASYGKLSELDQLFSQIGKVVPQSLNNLFSGLNS HHHHHHHHHHHHHHEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH IADLPADLGIRSSTLTNAQQVASSLNQMQSYLNGQLDQTNDQITGMTKRINEIGTELAKL HHCCCHHCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH NLELMKSPNQDAQLLDKQDALVQELSQYAQVNVIPQENGAKSIMLGGSVMLVSGEIAMSM HHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEECCEEEEEECCCCEEC GTQAGNPFPKELQLNSSISSQSVTVDPSKLGGQLGAMFDYRDQTLIPAGHELDQLALGVA CCCCCCCCCCCEEECCCCCCCEEEECHHHHCCCCCCEEECCCCEECCCCCCHHHHHHHHH DNFNKMQAQGIDLNGQVGANIFKDINDPMMSLGRAAGFSGNTGNATLGVTIDDTSLLTGG CCCCHHHHCCCCCCCCCCHHHHHHCCHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEECC AYELSFTSPATYELRDTETGTITPLTLTGSILSGGSGFSIDIKAGAMASGDRFAIRPTAG EEEEEECCCCEEEEECCCCCEEEEEEEECCEECCCCCEEEEEECCCCCCCCEEEEEECCC ASNGIEVVMKDPKGIAAASPKITADAANSGNTQVKLTQIGNRNAANFPVTGSELTIKLDT CCCCCEEEEECCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEC TVLPPTYEAFDAAGTSLGAATTYTPPSISAFGFTFEVDSTAAAGNDRFTFDLSFAEGDNS EECCCCHHHHHHCCCCCCCCEECCCCCCEEEEEEEEECCCCCCCCCEEEEEEEECCCCCC NAVAMAKLSESKVMNNGKSTLADVFENTKLDIGSKTKAAEVRTGSAEAVYQQAYARVESE CEEEEEECHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHCCC SGVNLDEEAANLMRFQQAYQASARIMTTAQQIFDTLLSSVR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 8158647 [H]