| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876155
Identifier: 160876155
GI number: 160876155
Start: 3617492
End: 3618013
Strand: Reverse
Name: 160876155
Synonym: Sbal195_3046
Alternate gene names: NA
Gene position: 3618013-3617492 (Counterclockwise)
Preceding gene: 160876156
Following gene: 160876154
Centisome position: 67.66
GC content: 45.21
Gene sequence:
>522_bases ATGAGCACGAATAGTGTGCTCATCATTTTGCTGATGGCTATTGCCATTTTGTGTCTTGGCGCCTTGAGTCTCGATTATCG GCACAAAAATAGTTTGTTGCGTGAAGATATAAAGCGTTTGGAATCGACTCAGGTGCTGTTAATGGTCCCTGATGAACAAG CTGAAGCTATTGCAACCTGGTTAGCGTCTCATCCTGATCAGACTAAAGCTATGCTGCAATTGGCAGCTCCTGGTGAGCAA AAGGCTGTTGCTATAGGTCCAGAATCTACGCAGAGTAGTGTCCCACCTTTGCTGGGTAAGCAAAGTGCAGCGATGGATAC GGCGAAGGATAACGCTAATCAGCAACCTTTATTTCCGACACTGCTGCAGACGCCAGAAGCAGAAGTTAAGGCTGCTATTT CGCCAATTGAGCCAAATAAAGCACAGATGCTACCTGTAGTGATTTCTGAAAATGCCGATGGTGTTAAAGTGATTAGTTTA CCGAATGGTGGTATTCGAGTAACGACGAGAAAAGAGCAGTAA
Upstream 100 bases:
>100_bases GCTGTCGCTAGTGCAGGTATTGCCACTCAGTCGATTGCCTTAGACAACATGGCTGAATGCATTTTAAAAGAGTCTGTTCG TGTCTAAGAGTCAAAATCCG
Downstream 100 bases:
>100_bases CTTTTGGAATGTGTGTGCTCAATATTCTCATTCATTAGCATTTAATCAATTTATATGGGGGTCACTTCTTGAAAGTCTGG ACCATAGCGAATCAAAAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MSTNSVLIILLMAIAILCLGALSLDYRHKNSLLREDIKRLESTQVLLMVPDEQAEAIATWLASHPDQTKAMLQLAAPGEQ KAVAIGPESTQSSVPPLLGKQSAAMDTAKDNANQQPLFPTLLQTPEAEVKAAISPIEPNKAQMLPVVISENADGVKVISL PNGGIRVTTRKEQ
Sequences:
>Translated_173_residues MSTNSVLIILLMAIAILCLGALSLDYRHKNSLLREDIKRLESTQVLLMVPDEQAEAIATWLASHPDQTKAMLQLAAPGEQ KAVAIGPESTQSSVPPLLGKQSAAMDTAKDNANQQPLFPTLLQTPEAEVKAAISPIEPNKAQMLPVVISENADGVKVISL PNGGIRVTTRKEQ >Mature_172_residues STNSVLIILLMAIAILCLGALSLDYRHKNSLLREDIKRLESTQVLLMVPDEQAEAIATWLASHPDQTKAMLQLAAPGEQK AVAIGPESTQSSVPPLLGKQSAAMDTAKDNANQQPLFPTLLQTPEAEVKAAISPIEPNKAQMLPVVISENADGVKVISLP NGGIRVTTRKEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18540; Mature: 18409
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTNSVLIILLMAIAILCLGALSLDYRHKNSLLREDIKRLESTQVLLMVPDEQAEAIATW CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH LASHPDQTKAMLQLAAPGEQKAVAIGPESTQSSVPPLLGKQSAAMDTAKDNANQQPLFPT HHCCCCHHHHHEEECCCCCCCEEEECCCCCCCCCCCCCCCCHHHHCCHHCCCCCCCCCHH LLQTPEAEVKAAISPIEPNKAQMLPVVISENADGVKVISLPNGGIRVTTRKEQ HHCCCCHHHHHCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCEEEEEECCC >Mature Secondary Structure STNSVLIILLMAIAILCLGALSLDYRHKNSLLREDIKRLESTQVLLMVPDEQAEAIATW CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH LASHPDQTKAMLQLAAPGEQKAVAIGPESTQSSVPPLLGKQSAAMDTAKDNANQQPLFPT HHCCCCHHHHHEEECCCCCCCEEEECCCCCCCCCCCCCCCCHHHHCCHHCCCCCCCCCHH LLQTPEAEVKAAISPIEPNKAQMLPVVISENADGVKVISLPNGGIRVTTRKEQ HHCCCCHHHHHCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA