| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is eryC1 [H]
Identifier: 160876135
GI number: 160876135
Start: 3595867
End: 3596970
Strand: Reverse
Name: eryC1 [H]
Synonym: Sbal195_3026
Alternate gene names: 160876135
Gene position: 3596970-3595867 (Counterclockwise)
Preceding gene: 160876136
Following gene: 160876134
Centisome position: 67.27
GC content: 43.48
Gene sequence:
>1104_bases ATGATTAACTTCCTTGATTTAAAAGCTATTAACAACCAATACCAGCAAGAGCTAAAAGAAGCTTGTGCACGAGTGATAGA TTCTGGTTGGTATATTATGGGCAATGAGCTTGCCCAATTTGAAACCGAATTTGCCGCTTATTGCGGCACAAAGCATTCAA TTGGCGTGGCCAATGGTCTCGATGCACTTATTCTCACTTTGCGCGCTTGGAAGGTGCTGGGCAAACTGCAAGCCGGCGAT GAAGTGATTGTGCAGGCTAATACTTATATTGCCTCTGTGTTGGCAATTACCGAGAATGATCTCGTGCCAGTATTGGTAGA GCCAAACCCTGGTAGCTATAACCTCGACCCCGAAACGCTCGCCGCGGCTATTACTCCCAAGACTAAGGTGATTTTACCAG TTCATCTTTATGGACAGTTGTCGCCGATGCCAGAAATTATGGCGATAGCCTGTGCACATAATCTACTCGTATTGGAAGAT TGTGCCCAATCACACGGTGCTGAAATTAACGGTAAACGCGCCGGAAACTGGGGTGATGCGGCAGGCTTTAGCTTTTATCC GGGTAAAAACTTGGGAGCACTCGGTGATGCTGGTGCAATTACCACAAATGATGATGAGTTAGCGCAAACTCTTAAAGCCT TAAGGAATTATGGTTCTCATAAAAAGTACGAGAACCTCTATCAAGGGGTTAATAGCCGTCTTGATGAAATTCAAGCTGCA ATGTTACGAGTTAAATTGCGCCATTTAGATAGCGAAACCGCTCGCCGTCAGCATATTGCTCAAACTTATCGCACTAATAT CAGCAACCCATTAATTACGCTGCCACAAGTGAATGAAGAACTTGCTCACGTTTGGCATTTATTTGTTGTGAGTTGTGAAC AGCGAGAAGTTTTGCAACAATTTTTAGCTTCAAGAGGTATTCAAACTTTAATTCATTATCCAATCCCCCCACATAAACAG CACGCTTATAGTCATTATGCTGATTTGCAATTGCCACTAACTGAGTTAATTCATCAGCAAGTACTTTCTATTCCGCTTGA TCCTACCATGAGTGATGCGGCGGTTAAGCAAGTTATTGCCGCAATGAATGAGTTTGCTGGATGA
Upstream 100 bases:
>100_bases GCTATGGTGGGTGCAGGTTCTGTAGTGACTAAAGATGTGCCAGCATACGCTGTAGTTGTTGGTAACCCAGCCAGAATCAT TAAATATATAGAGCAGTAAC
Downstream 100 bases:
>100_bases AGCGTTTGCTCAAAGTCACCGCCATGACCGGGTTATTAACCTTATTGCGCATGGCGATGGGATTTGTGATTGCCAAGGTA GTGGCCATCTATACCGGCCC
Product: DegT/DnrJ/EryC1/StrS aminotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MINFLDLKAINNQYQQELKEACARVIDSGWYIMGNELAQFETEFAAYCGTKHSIGVANGLDALILTLRAWKVLGKLQAGD EVIVQANTYIASVLAITENDLVPVLVEPNPGSYNLDPETLAAAITPKTKVILPVHLYGQLSPMPEIMAIACAHNLLVLED CAQSHGAEINGKRAGNWGDAAGFSFYPGKNLGALGDAGAITTNDDELAQTLKALRNYGSHKKYENLYQGVNSRLDEIQAA MLRVKLRHLDSETARRQHIAQTYRTNISNPLITLPQVNEELAHVWHLFVVSCEQREVLQQFLASRGIQTLIHYPIPPHKQ HAYSHYADLQLPLTELIHQQVLSIPLDPTMSDAAVKQVIAAMNEFAG
Sequences:
>Translated_367_residues MINFLDLKAINNQYQQELKEACARVIDSGWYIMGNELAQFETEFAAYCGTKHSIGVANGLDALILTLRAWKVLGKLQAGD EVIVQANTYIASVLAITENDLVPVLVEPNPGSYNLDPETLAAAITPKTKVILPVHLYGQLSPMPEIMAIACAHNLLVLED CAQSHGAEINGKRAGNWGDAAGFSFYPGKNLGALGDAGAITTNDDELAQTLKALRNYGSHKKYENLYQGVNSRLDEIQAA MLRVKLRHLDSETARRQHIAQTYRTNISNPLITLPQVNEELAHVWHLFVVSCEQREVLQQFLASRGIQTLIHYPIPPHKQ HAYSHYADLQLPLTELIHQQVLSIPLDPTMSDAAVKQVIAAMNEFAG >Mature_367_residues MINFLDLKAINNQYQQELKEACARVIDSGWYIMGNELAQFETEFAAYCGTKHSIGVANGLDALILTLRAWKVLGKLQAGD EVIVQANTYIASVLAITENDLVPVLVEPNPGSYNLDPETLAAAITPKTKVILPVHLYGQLSPMPEIMAIACAHNLLVLED CAQSHGAEINGKRAGNWGDAAGFSFYPGKNLGALGDAGAITTNDDELAQTLKALRNYGSHKKYENLYQGVNSRLDEIQAA MLRVKLRHLDSETARRQHIAQTYRTNISNPLITLPQVNEELAHVWHLFVVSCEQREVLQQFLASRGIQTLIHYPIPPHKQ HAYSHYADLQLPLTELIHQQVLSIPLDPTMSDAAVKQVIAAMNEFAG
Specific function: Sensor protein that transfers the signal of environmental stimuli to the regulatory region of target genes to activate or repress transcription of erythromycin biosynthesis genes (Potential) [H]
COG id: COG0399
COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the degT/dnrJ/eryC1 family [H]
Homologues:
Organism=Escherichia coli, GI145693159, Length=368, Percent_Identity=30.7065217391304, Blast_Score=155, Evalue=5e-39, Organism=Escherichia coli, GI2367285, Length=316, Percent_Identity=30.379746835443, Blast_Score=125, Evalue=5e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000653 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]
EC number: NA
Molecular weight: Translated: 40495; Mature: 40495
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINFLDLKAINNQYQQELKEACARVIDSGWYIMGNELAQFETEFAAYCGTKHSIGVANGL CCCEEHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHCCCCCCCCCCCCH DALILTLRAWKVLGKLQAGDEVIVQANTYIASVLAITENDLVPVLVEPNPGSYNLDPETL HHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHEECCCCEEEEECCCCCCCCCCHHHH AAAITPKTKVILPVHLYGQLSPMPEIMAIACAHNLLVLEDCAQSHGAEINGKRAGNWGDA HHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCC AGFSFYPGKNLGALGDAGAITTNDDELAQTLKALRNYGSHKKYENLYQGVNSRLDEIQAA CCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH MLRVKLRHLDSETARRQHIAQTYRTNISNPLITLPQVNEELAHVWHLFVVSCEQREVLQQ HHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCHHHHHHHH FLASRGIQTLIHYPIPPHKQHAYSHYADLQLPLTELIHQQVLSIPLDPTMSDAAVKQVIA HHHHCCCHHEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHH AMNEFAG HHHHHCC >Mature Secondary Structure MINFLDLKAINNQYQQELKEACARVIDSGWYIMGNELAQFETEFAAYCGTKHSIGVANGL CCCEEHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHCCCCCCCCCCCCH DALILTLRAWKVLGKLQAGDEVIVQANTYIASVLAITENDLVPVLVEPNPGSYNLDPETL HHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHEECCCCEEEEECCCCCCCCCCHHHH AAAITPKTKVILPVHLYGQLSPMPEIMAIACAHNLLVLEDCAQSHGAEINGKRAGNWGDA HHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCC AGFSFYPGKNLGALGDAGAITTNDDELAQTLKALRNYGSHKKYENLYQGVNSRLDEIQAA CCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH MLRVKLRHLDSETARRQHIAQTYRTNISNPLITLPQVNEELAHVWHLFVVSCEQREVLQQ HHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCHHHHHHHH FLASRGIQTLIHYPIPPHKQHAYSHYADLQLPLTELIHQQVLSIPLDPTMSDAAVKQVIA HHHHCCCHHEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHH AMNEFAG HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2575703 [H]