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The map label for this gene is ugd [H]

Identifier: 160876128

GI number: 160876128

Start: 3589070

End: 3590263

Strand: Reverse

Name: ugd [H]

Synonym: Sbal195_3019

Alternate gene names: 160876128

Gene position: 3590263-3589070 (Counterclockwise)

Preceding gene: 160876129

Following gene: 160876127

Centisome position: 67.14

GC content: 39.87

Gene sequence:

>1194_bases
ATGGTCTTATCAAATACTGGAAGTAAAATGAAAATTGCTATTGCTGGTACAGGTTATGTCGGCCTCTCAAATGCTGTGTT
ATTAGCTCAGCACCATCAAGTTTTTGCGGTTGATGTTATCGCTGATAAGGTTGCGTCAATTAACAATCGTAAGTCACCGA
TTATTGATGCCGAGATAGAAGATTTTTTAACACATCGAGAGCTTAATTTAACTGCGACCTTGGATAAGCAACTTGCTTAT
CAAGATGCTGAATTTGTGATCATTGCGACGCCAACGGATTATGATCCAAAAACCAATTATTTTAATACTTCCTCTGTTGA
GTCGGTTATTCAAGATGTTATTGGCATTAACCCTAATGCGGTGATGGTGATCAAATCTACCGTGCCAGTGGGCTTTACTG
CCAAGGTTAAGCAAAAATATCATTGCGATAATATTCTCTTTTCGCCAGAGTTTTTGCGTGAGGGTCGGGCGCTTTACGAC
AATTTGCATCCATCGCGCATTATTGTTGGTGAACGTAGTGAACGTGCTAAAGTGTTTGCCGATTTATTAGTGCAAGGCGC
CATAAAAAAAGATATTCAAGTCTTATTTACTGATAGCACTGAAGCTGAGGCAGTTAAATTATTTTCTAACACTTATCTTG
CTATGCGTGTTGCTTATTTTAACGAACTTGATACTTATGCTGAAACTCATGGGCTAGATTCTCGGCAGATTATTGAGGGG
GTGTGTTTAGATCCGCGAATTGGTGATCATTACAATAATCCTTCTTTTGGTTATGGTGGTTATTGCTTACCTAAAGATAC
CAAACAACTGCGAGCGAACTATGCCGATGTGCCTAATAGCATTATTGGTGCGATTGTGGAATCTAATACCACCCGTAAAG
ACTTTATCGCTGACTCTATTTTAAGCCGTAATCCTAAGGTTGTCGGTATTTATCGGCTGATTATGAAGTCTGGTTCTGAT
AATTTTAGAGCCTCGAGTATTCAAGGGATTATGAAACGCCTCAAGGCTAAAGGTGTAGAGGTCATAGTGTATGAGCCAGT
ACTTAAAGAGAAAGAGTTCTTCCATTCCCGTGTAGTTACCGATTTAACAGCCTTTAAAGTTGCTTCTGATGTGATTGTCT
CAAACCGTATGGCCAAAGAACTGGCGGATGTTGCTGATAAGGTTTATACACGCGATCTGTTTGGGAGTGACTAA

Upstream 100 bases:

>100_bases
AATAAACTTAATGCAGCTCGATATCAGTGGCGCTTGTATCGTGATGTAGTGGGTTTAAATTTGCTTAAATGTTCTTGGTA
TTTTTGCTGGTATGTAGTAA

Downstream 100 bases:

>100_bases
GGGCTCTTTTTAAACTCAATATCGAGCAAAACTGCTGAATTTTATTCGGCTTTTTTAAGGGATTTAGTATGTCTAGGAAG
TATTTTGGTACTGACGGTGT

Product: nucleotide sugar dehydrogenase

Products: NA

Alternate protein names: UDP-Glc dehydrogenase; UDP-GlcDH; UDPGDH [H]

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MVLSNTGSKMKIAIAGTGYVGLSNAVLLAQHHQVFAVDVIADKVASINNRKSPIIDAEIEDFLTHRELNLTATLDKQLAY
QDAEFVIIATPTDYDPKTNYFNTSSVESVIQDVIGINPNAVMVIKSTVPVGFTAKVKQKYHCDNILFSPEFLREGRALYD
NLHPSRIIVGERSERAKVFADLLVQGAIKKDIQVLFTDSTEAEAVKLFSNTYLAMRVAYFNELDTYAETHGLDSRQIIEG
VCLDPRIGDHYNNPSFGYGGYCLPKDTKQLRANYADVPNSIIGAIVESNTTRKDFIADSILSRNPKVVGIYRLIMKSGSD
NFRASSIQGIMKRLKAKGVEVIVYEPVLKEKEFFHSRVVTDLTAFKVASDVIVSNRMAKELADVADKVYTRDLFGSD

Sequences:

>Translated_397_residues
MVLSNTGSKMKIAIAGTGYVGLSNAVLLAQHHQVFAVDVIADKVASINNRKSPIIDAEIEDFLTHRELNLTATLDKQLAY
QDAEFVIIATPTDYDPKTNYFNTSSVESVIQDVIGINPNAVMVIKSTVPVGFTAKVKQKYHCDNILFSPEFLREGRALYD
NLHPSRIIVGERSERAKVFADLLVQGAIKKDIQVLFTDSTEAEAVKLFSNTYLAMRVAYFNELDTYAETHGLDSRQIIEG
VCLDPRIGDHYNNPSFGYGGYCLPKDTKQLRANYADVPNSIIGAIVESNTTRKDFIADSILSRNPKVVGIYRLIMKSGSD
NFRASSIQGIMKRLKAKGVEVIVYEPVLKEKEFFHSRVVTDLTAFKVASDVIVSNRMAKELADVADKVYTRDLFGSD
>Mature_397_residues
MVLSNTGSKMKIAIAGTGYVGLSNAVLLAQHHQVFAVDVIADKVASINNRKSPIIDAEIEDFLTHRELNLTATLDKQLAY
QDAEFVIIATPTDYDPKTNYFNTSSVESVIQDVIGINPNAVMVIKSTVPVGFTAKVKQKYHCDNILFSPEFLREGRALYD
NLHPSRIIVGERSERAKVFADLLVQGAIKKDIQVLFTDSTEAEAVKLFSNTYLAMRVAYFNELDTYAETHGLDSRQIIEG
VCLDPRIGDHYNNPSFGYGGYCLPKDTKQLRANYADVPNSIIGAIVESNTTRKDFIADSILSRNPKVVGIYRLIMKSGSD
NFRASSIQGIMKRLKAKGVEVIVYEPVLKEKEFFHSRVVTDLTAFKVASDVIVSNRMAKELADVADKVYTRDLFGSD

Specific function: Unknown

COG id: COG1004

COG function: function code M; Predicted UDP-glucose 6-dehydrogenase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UDP-glucose/GDP-mannose dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4507813, Length=394, Percent_Identity=25.3807106598985, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI296040438, Length=280, Percent_Identity=26.4285714285714, Blast_Score=86, Evalue=6e-17,
Organism=Homo sapiens, GI296040443, Length=244, Percent_Identity=27.0491803278689, Blast_Score=82, Evalue=1e-15,
Organism=Escherichia coli, GI1788340, Length=388, Percent_Identity=75.5154639175258, Blast_Score=623, Evalue=1e-180,
Organism=Caenorhabditis elegans, GI17560350, Length=401, Percent_Identity=27.6807980049875, Blast_Score=120, Evalue=9e-28,
Organism=Drosophila melanogaster, GI17136908, Length=385, Percent_Identity=27.012987012987, Blast_Score=108, Evalue=6e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008927
- InterPro:   IPR013328
- InterPro:   IPR016040
- InterPro:   IPR017476
- InterPro:   IPR014027
- InterPro:   IPR014026
- InterPro:   IPR001732 [H]

Pfam domain/function: PF00984 UDPG_MGDP_dh; PF03720 UDPG_MGDP_dh_C; PF03721 UDPG_MGDP_dh_N [H]

EC number: =1.1.1.22 [H]

Molecular weight: Translated: 44080; Mature: 44080

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLSNTGSKMKIAIAGTGYVGLSNAVLLAQHHQVFAVDVIADKVASINNRKSPIIDAEIE
CEECCCCCEEEEEEEECCCCCCCCEEEEEECCCEEEEHHHHHHHHHCCCCCCCEECHHHH
DFLTHRELNLTATLDKQLAYQDAEFVIIATPTDYDPKTNYFNTSSVESVIQDVIGINPNA
HHHHHCCCEEEEEHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCE
VMVIKSTVPVGFTAKVKQKYHCDNILFSPEFLREGRALYDNLHPSRIIVGERSERAKVFA
EEEEEECCCCCEEHHHHHHHCCCCEEECHHHHHCCHHHHHCCCCCEEEECCCCHHHHHHH
DLLVQGAIKKDIQVLFTDSTEAEAVKLFSNTYLAMRVAYFNELDTYAETHGLDSRQIIEG
HHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHC
VCLDPRIGDHYNNPSFGYGGYCLPKDTKQLRANYADVPNSIIGAIVESNTTRKDFIADSI
EECCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHH
LSRNPKVVGIYRLIMKSGSDNFRASSIQGIMKRLKAKGVEVIVYEPVLKEKEFFHSRVVT
HCCCCCEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHH
DLTAFKVASDVIVSNRMAKELADVADKVYTRDLFGSD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVLSNTGSKMKIAIAGTGYVGLSNAVLLAQHHQVFAVDVIADKVASINNRKSPIIDAEIE
CEECCCCCEEEEEEEECCCCCCCCEEEEEECCCEEEEHHHHHHHHHCCCCCCCEECHHHH
DFLTHRELNLTATLDKQLAYQDAEFVIIATPTDYDPKTNYFNTSSVESVIQDVIGINPNA
HHHHHCCCEEEEEHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCE
VMVIKSTVPVGFTAKVKQKYHCDNILFSPEFLREGRALYDNLHPSRIIVGERSERAKVFA
EEEEEECCCCCEEHHHHHHHCCCCEEECHHHHHCCHHHHHCCCCCEEEECCCCHHHHHHH
DLLVQGAIKKDIQVLFTDSTEAEAVKLFSNTYLAMRVAYFNELDTYAETHGLDSRQIIEG
HHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHC
VCLDPRIGDHYNNPSFGYGGYCLPKDTKQLRANYADVPNSIIGAIVESNTTRKDFIADSI
EECCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHH
LSRNPKVVGIYRLIMKSGSDNFRASSIQGIMKRLKAKGVEVIVYEPVLKEKEFFHSRVVT
HCCCCCEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHH
DLTAFKVASDVIVSNRMAKELADVADKVYTRDLFGSD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7682279 [H]