| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is ate [H]
Identifier: 160875695
GI number: 160875695
Start: 3056813
End: 3057523
Strand: Direct
Name: ate [H]
Synonym: Sbal195_2583
Alternate gene names: 160875695
Gene position: 3056813-3057523 (Clockwise)
Preceding gene: 160875694
Following gene: 160875696
Centisome position: 57.17
GC content: 46.69
Gene sequence:
>711_bases TTGAACTCGAGTAAAGCATCGATCGCTATCGGTATCAGTCAAATATTTCCCTGCAGCTACCTCGATGGCCAGCAGGAGCA GCTACTTGTCATCCAAGAAGATACGCTCGATCCCATTTTATTTGAGCGTTTACTCGCGGTGGGTTTTCGCCGCAGTGGCG GCTCCATCTATAAACCCCGTTGCCCAAGGTGCAGCGCGTGCCAGCCTATTCGTGTGCCAGCGCAGGAATTTGTGCCATCG AAACGTCAAAAACGGACTTTAGCAAAAAACCAAGATCTGACCTGGCGAATTACATCGGAACAAACCGCCGAACAATATGC CCTGTATGAACATTACATTCGTGAGCGGCATTTTGATGGCCCTATGTTCCCCCCGAGTGAAGATCAATATAATCACTTTC TTTTTTGCCATTGGTTGCCGCCGACGTTTATCGAAGTCTATAACGGCGATAAATTATTAGCCGTCGCGGTCACAGATACC TTACCCAATAGTCTGTCGGCGATTTACAGCTATTTTGACCCCGATGAAGAACAGCGTTCCCTCGGCGCCCTGTTAATTTT AATTCAGTGCCGATTGGCAAAACTGATGGACAAAGAATTTGTTTATCTCGGATATCAAATAGATGAAAACCGTAAGATGT CCTACAAGCGTTTATATCGCCCATATCAAATTCTCACACCGACGGGCTGGGAGTATTCCCAAGTTTGCTAA
Upstream 100 bases:
>100_bases GGAGCCAAAGCCATTAAACGCATTGATTTTATAACGTTACTGAGCGAACTGAGAAACAATCCCTTGGACCCAGCGACTTG GACCACTAAAGAGGTCATCC
Downstream 100 bases:
>100_bases GTACTTCCCCTTTACAGCAGGGTGAATTTGGGGCATGATACGCCCGTTTTTTATATTCGAAGGCTAATGGGATAATTAAT TAATGGCGAAAGAAGACAAC
Product: arginyl-tRNA-protein transferase
Products: NA
Alternate protein names: Arginyltransferase; R-transferase [H]
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MNSSKASIAIGISQIFPCSYLDGQQEQLLVIQEDTLDPILFERLLAVGFRRSGGSIYKPRCPRCSACQPIRVPAQEFVPS KRQKRTLAKNQDLTWRITSEQTAEQYALYEHYIRERHFDGPMFPPSEDQYNHFLFCHWLPPTFIEVYNGDKLLAVAVTDT LPNSLSAIYSYFDPDEEQRSLGALLILIQCRLAKLMDKEFVYLGYQIDENRKMSYKRLYRPYQILTPTGWEYSQVC
Sequences:
>Translated_236_residues MNSSKASIAIGISQIFPCSYLDGQQEQLLVIQEDTLDPILFERLLAVGFRRSGGSIYKPRCPRCSACQPIRVPAQEFVPS KRQKRTLAKNQDLTWRITSEQTAEQYALYEHYIRERHFDGPMFPPSEDQYNHFLFCHWLPPTFIEVYNGDKLLAVAVTDT LPNSLSAIYSYFDPDEEQRSLGALLILIQCRLAKLMDKEFVYLGYQIDENRKMSYKRLYRPYQILTPTGWEYSQVC >Mature_236_residues MNSSKASIAIGISQIFPCSYLDGQQEQLLVIQEDTLDPILFERLLAVGFRRSGGSIYKPRCPRCSACQPIRVPAQEFVPS KRQKRTLAKNQDLTWRITSEQTAEQYALYEHYIRERHFDGPMFPPSEDQYNHFLFCHWLPPTFIEVYNGDKLLAVAVTDT LPNSLSAIYSYFDPDEEQRSLGALLILIQCRLAKLMDKEFVYLGYQIDENRKMSYKRLYRPYQILTPTGWEYSQVC
Specific function: May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate (Potential) [H]
COG id: COG2935
COG function: function code O; Putative arginyl-tRNA:protein arginylyltransferase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the R-transferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 - InterPro: IPR007472 - InterPro: IPR017138 - InterPro: IPR007471 [H]
Pfam domain/function: PF04377 ATE_C; PF04376 ATE_N [H]
EC number: =2.3.2.8 [H]
Molecular weight: Translated: 27472; Mature: 27472
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSSKASIAIGISQIFPCSYLDGQQEQLLVIQEDTLDPILFERLLAVGFRRSGGSIYKPR CCCCCCEEEEEHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCC CPRCSACQPIRVPAQEFVPSKRQKRTLAKNQDLTWRITSEQTAEQYALYEHYIRERHFDG CCCCCCCCCCCCCHHHHCCCHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCC PMFPPSEDQYNHFLFCHWLPPTFIEVYNGDKLLAVAVTDTLPNSLSAIYSYFDPDEEQRS CCCCCCCCCCCEEEEEEECCCCEEEEECCCEEEEEEEECCCCHHHHHHHHHCCCCHHHHH LGALLILIQCRLAKLMDKEFVYLGYQIDENRKMSYKRLYRPYQILTPTGWEYSQVC HHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHCCCEEEECCCCCCHHCCC >Mature Secondary Structure MNSSKASIAIGISQIFPCSYLDGQQEQLLVIQEDTLDPILFERLLAVGFRRSGGSIYKPR CCCCCCEEEEEHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCC CPRCSACQPIRVPAQEFVPSKRQKRTLAKNQDLTWRITSEQTAEQYALYEHYIRERHFDG CCCCCCCCCCCCCHHHHCCCHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCC PMFPPSEDQYNHFLFCHWLPPTFIEVYNGDKLLAVAVTDTLPNSLSAIYSYFDPDEEQRS CCCCCCCCCCCEEEEEEECCCCEEEEECCCEEEEEEEECCCCHHHHHHHHHCCCCHHHHH LGALLILIQCRLAKLMDKEFVYLGYQIDENRKMSYKRLYRPYQILTPTGWEYSQVC HHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHCCCEEEECCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]