| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is yebT [H]
Identifier: 160875678
GI number: 160875678
Start: 3037979
End: 3040618
Strand: Direct
Name: yebT [H]
Synonym: Sbal195_2566
Alternate gene names: 160875678
Gene position: 3037979-3040618 (Clockwise)
Preceding gene: 160875677
Following gene: 160875680
Centisome position: 56.81
GC content: 48.22
Gene sequence:
>2640_bases ATGACACAAATTGAATCGCCGAAAGTTGTAAAGAAAAAACTCTTTTCGCCCATTTGGCTACTGCCTATTGTCGCGTTGGC ATTGGGTGCGTGGTTGGGCATTAAGAGCATTAAAGAATCGGGCGTTGAAATTCAAATTCACTTTCCGAGCGCCACTGGGA TTGACGTAGGTAAAACCTTAGTCAAATACCAAGGCTTGACTGTCGGTAAAGTCAAAGACATAGGAATAGATGAAGATCTC AAGGGCGTAAACGTTAAAGTCATGATGGACTACCGTGCTAAGCCTTTCTTAAATAAGGAAACTCTCTTCTGGCTGGTCAC CCCTAAGGCCAGTATCACAGGTGTTGAAGGCTTAGATGCGCTGTTCTCAGGTAACTACATTGCGATTCAACCGGGTAAAG GCAATGCGTCAACCTTCTTCGAGGCTGAGCGCCAACCGCCGCCGATGCAAATCGGCTCAGAAGGTGTGATGGTCGAACTG ACCTCAGACAAACTCGGTTCGTTGGATGTTGGCTCGCCAATATTTTTCCGCCAAATCCCTGTGGGCAGTGTGGTCAGCTA TCGTTTAGATGGCAATCAAAGAGTCATCATCAGCGCCTTCATTCAAGAGCAATACGCGCGATTAGTGAAGAAAAACTCTC ACTTTTGGAACGTCTCCGGCGTTAAAATTGATGCTTCACTGACTGGGGTTAAAGTCAGCTCTGAGAGTTTGGCATCCATT CTGGCTGGCGGCGTGAGTTTCAGCTCTGACGATAAAGCGGATATTGCCAAAAACGGTGACATTTTTTCGCTTTATGATTC AGAAACCACAGCCCTTGGCGGCATAGAAATAAACCTGACCATGGCTGATGCTAACGGTTTAGACAAAGGCACTCGCATCG TTTATCGCGGCATCAATATCGGCAGCATTTTAAGCAAGCAACTCACCGCCAATGGCGTAATAGCTGTGGCTAAGTTTGAA CCTCAATACGGTTCACTGCTAACTAACGACGGCGTGTTTTGGCTTGAAGGTGCCGATATTTCCCTCTCAGGCATTAAAAA TCCAGAGCGTTTACTAACGGGCAGCGTGATCAACTTCCTGCCGGGCATTAATACTAAAACGGCGATGCCAAGCAGTTTTG CCTTACAAACCAAAGCGCCTGATTTACTGCAATCGAAGAAGCGTTTCTTGACCTTAACCTCAGCCGAAAACATGGGCATT TCAGCGGGCGCCGAAGTTCGCTTTAAGCAAATCCCCATTGGCTCAGTACTTGCGGTTAAGTTAACCAAAGATTTATCGGC GGTGGAATACCAACTCGAGTTACAACCTGAGTTTGCTAGCCTAATTCGCAGCGACAGCTATTTTGTGCCTGAGTCGGCAT TAACAGTAAAAGCATCACTAGACGGCGTTTCAGTCAAAGCAAGGGACTTTACGACGCTCACTCAAGGTGCGGTTAGCTTG ATCCAAGGCCACAGCGATACACCACTCGCCGCCAACAGTGCCCTCACCTTGTTTAGTTCTGTGGATGCCGCGACAGCCTT CTATGATCGTCAGCAACAAGTGCATCTGACCTTAATCAGTCAAGATGGCGCCGATGTCAGCCAAGGCTCACCGATTTACT ATAAAAAGATGCAAATTGGCACAGTTGACACAGTGAACTGGCAAAGTAAGACCGAAGACTTTGCTATCAAGCTCGCTATC GACAAACAATTCCAGCCCTTGCTGAAAAAGCCGAATGTGTTCTGGCGTAATAGCGCAGTGGATATTAGCGCCAGTCTTGC GGGCATTGATGTTGCGGTCGCGCCGCTTCAAGGAGCATTAAAGGGCAGCATCAGTCTGGGATTGCTTGATAGCAATGGCA AAGCCAGCAATGCAGCTAACTTAAAACTCTATGAGAGCAAGCAGTTGGCATTAACGCAGGCGCAGGCAATTCGCCTCACC CTACCCGCTTCAAGTAAACTGACGGCCAAAGCAGCGATTCGCTATCAAGGTCATCAAGTGGGTGAAGTGTCGCAGGTGAA GCTCAATGCCGATCTCAATACACTCACAGCAACGGCCTATCTCTACGGCGAATACGCCGAACATTTCAGCCGCAGCGACT GTGAATATCATCTAGTGGATGCGCAAATTTCTCTGGCGGGAATTAAAGCGCCAGACACCTTGATCACTGGCCCTTATATC GGTGTACTGCCGGGTACAAGCAATCAAAAAACGACCCAGTTTGTTGCCAACCTCGCTGCCAGCAGCTATGCCAATGTTGC CGAAGATGCGCTTAAATTTACCCTAGAAGACAATAACTTAGGCTCGATGAAAGTCGGCACACCTATCTTCTTCCGTGGTA TCAAAGTCGGTCAAATCGATGGTTATCACCTGTCGACACAGGGCAATAGCGTGCTGATGCAAGCCCATATTGAGCCGCAG TACAGTCACTTAGTGAATCAAAGCAGTCAGTTCTGGGATGCTTCTGGGATTAAAGTTGATGTTGGCCTATTCTCAGGCGC GCAAATCGAAGCGGGCTCGCTGGAAACCTTACTCGCTGGCGGTATTAATGTCGCGACTAAGGACACGACTCAAGAGGGTA ATCGTTTAGCAGCAGGAACAGTATTAAGATTGCAACACAAAGCCGAAAACGAATGGCAGGAATGGGCACCCGCCCAGTAA
Upstream 100 bases:
>100_bases GCGCCTGCAGCGACCGCATTTGCCTTGGTTATTCTGTTAACTCAGTTAGCCGCAAAAGTGTTAGACACTCGTTTACTCTG GGATCGATTGGAACCTCAAG
Downstream 100 bases:
>100_bases TTCTTTTCTTCAAAATACTTACACCAACGCACTAATATTAAAGCTCTTAAAAGTCAATCAGGCGCATTATGCGCCTGATT GATTTTTAGCTTCTCAAATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 879; Mature: 878
Protein sequence:
>879_residues MTQIESPKVVKKKLFSPIWLLPIVALALGAWLGIKSIKESGVEIQIHFPSATGIDVGKTLVKYQGLTVGKVKDIGIDEDL KGVNVKVMMDYRAKPFLNKETLFWLVTPKASITGVEGLDALFSGNYIAIQPGKGNASTFFEAERQPPPMQIGSEGVMVEL TSDKLGSLDVGSPIFFRQIPVGSVVSYRLDGNQRVIISAFIQEQYARLVKKNSHFWNVSGVKIDASLTGVKVSSESLASI LAGGVSFSSDDKADIAKNGDIFSLYDSETTALGGIEINLTMADANGLDKGTRIVYRGINIGSILSKQLTANGVIAVAKFE PQYGSLLTNDGVFWLEGADISLSGIKNPERLLTGSVINFLPGINTKTAMPSSFALQTKAPDLLQSKKRFLTLTSAENMGI SAGAEVRFKQIPIGSVLAVKLTKDLSAVEYQLELQPEFASLIRSDSYFVPESALTVKASLDGVSVKARDFTTLTQGAVSL IQGHSDTPLAANSALTLFSSVDAATAFYDRQQQVHLTLISQDGADVSQGSPIYYKKMQIGTVDTVNWQSKTEDFAIKLAI DKQFQPLLKKPNVFWRNSAVDISASLAGIDVAVAPLQGALKGSISLGLLDSNGKASNAANLKLYESKQLALTQAQAIRLT LPASSKLTAKAAIRYQGHQVGEVSQVKLNADLNTLTATAYLYGEYAEHFSRSDCEYHLVDAQISLAGIKAPDTLITGPYI GVLPGTSNQKTTQFVANLAASSYANVAEDALKFTLEDNNLGSMKVGTPIFFRGIKVGQIDGYHLSTQGNSVLMQAHIEPQ YSHLVNQSSQFWDASGIKVDVGLFSGAQIEAGSLETLLAGGINVATKDTTQEGNRLAAGTVLRLQHKAENEWQEWAPAQ
Sequences:
>Translated_879_residues MTQIESPKVVKKKLFSPIWLLPIVALALGAWLGIKSIKESGVEIQIHFPSATGIDVGKTLVKYQGLTVGKVKDIGIDEDL KGVNVKVMMDYRAKPFLNKETLFWLVTPKASITGVEGLDALFSGNYIAIQPGKGNASTFFEAERQPPPMQIGSEGVMVEL TSDKLGSLDVGSPIFFRQIPVGSVVSYRLDGNQRVIISAFIQEQYARLVKKNSHFWNVSGVKIDASLTGVKVSSESLASI LAGGVSFSSDDKADIAKNGDIFSLYDSETTALGGIEINLTMADANGLDKGTRIVYRGINIGSILSKQLTANGVIAVAKFE PQYGSLLTNDGVFWLEGADISLSGIKNPERLLTGSVINFLPGINTKTAMPSSFALQTKAPDLLQSKKRFLTLTSAENMGI SAGAEVRFKQIPIGSVLAVKLTKDLSAVEYQLELQPEFASLIRSDSYFVPESALTVKASLDGVSVKARDFTTLTQGAVSL IQGHSDTPLAANSALTLFSSVDAATAFYDRQQQVHLTLISQDGADVSQGSPIYYKKMQIGTVDTVNWQSKTEDFAIKLAI DKQFQPLLKKPNVFWRNSAVDISASLAGIDVAVAPLQGALKGSISLGLLDSNGKASNAANLKLYESKQLALTQAQAIRLT LPASSKLTAKAAIRYQGHQVGEVSQVKLNADLNTLTATAYLYGEYAEHFSRSDCEYHLVDAQISLAGIKAPDTLITGPYI GVLPGTSNQKTTQFVANLAASSYANVAEDALKFTLEDNNLGSMKVGTPIFFRGIKVGQIDGYHLSTQGNSVLMQAHIEPQ YSHLVNQSSQFWDASGIKVDVGLFSGAQIEAGSLETLLAGGINVATKDTTQEGNRLAAGTVLRLQHKAENEWQEWAPAQ >Mature_878_residues TQIESPKVVKKKLFSPIWLLPIVALALGAWLGIKSIKESGVEIQIHFPSATGIDVGKTLVKYQGLTVGKVKDIGIDEDLK GVNVKVMMDYRAKPFLNKETLFWLVTPKASITGVEGLDALFSGNYIAIQPGKGNASTFFEAERQPPPMQIGSEGVMVELT SDKLGSLDVGSPIFFRQIPVGSVVSYRLDGNQRVIISAFIQEQYARLVKKNSHFWNVSGVKIDASLTGVKVSSESLASIL AGGVSFSSDDKADIAKNGDIFSLYDSETTALGGIEINLTMADANGLDKGTRIVYRGINIGSILSKQLTANGVIAVAKFEP QYGSLLTNDGVFWLEGADISLSGIKNPERLLTGSVINFLPGINTKTAMPSSFALQTKAPDLLQSKKRFLTLTSAENMGIS AGAEVRFKQIPIGSVLAVKLTKDLSAVEYQLELQPEFASLIRSDSYFVPESALTVKASLDGVSVKARDFTTLTQGAVSLI QGHSDTPLAANSALTLFSSVDAATAFYDRQQQVHLTLISQDGADVSQGSPIYYKKMQIGTVDTVNWQSKTEDFAIKLAID KQFQPLLKKPNVFWRNSAVDISASLAGIDVAVAPLQGALKGSISLGLLDSNGKASNAANLKLYESKQLALTQAQAIRLTL PASSKLTAKAAIRYQGHQVGEVSQVKLNADLNTLTATAYLYGEYAEHFSRSDCEYHLVDAQISLAGIKAPDTLITGPYIG VLPGTSNQKTTQFVANLAASSYANVAEDALKFTLEDNNLGSMKVGTPIFFRGIKVGQIDGYHLSTQGNSVLMQAHIEPQY SHLVNQSSQFWDASGIKVDVGLFSGAQIEAGSLETLLAGGINVATKDTTQEGNRLAAGTVLRLQHKAENEWQEWAPAQ
Specific function: Unknown
COG id: COG3008
COG function: function code R; Paraquat-inducible protein B
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pqiB family [H]
Homologues:
Organism=Escherichia coli, GI87081984, Length=887, Percent_Identity=34.2728297632469, Blast_Score=457, Evalue=1e-129, Organism=Escherichia coli, GI1787184, Length=307, Percent_Identity=34.2019543973941, Blast_Score=170, Evalue=4e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003399 [H]
Pfam domain/function: PF02470 MCE [H]
EC number: NA
Molecular weight: Translated: 94334; Mature: 94202
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQIESPKVVKKKLFSPIWLLPIVALALGAWLGIKSIKESGVEIQIHFPSATGIDVGKTL CCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHH VKYQGLTVGKVKDIGIDEDLKGVNVKVMMDYRAKPFLNKETLFWLVTPKASITGVEGLDA HHHCCCEEECEEECCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCHHH LFSGNYIAIQPGKGNASTFFEAERQPPPMQIGSEGVMVELTSDKLGSLDVGSPIFFRQIP HHCCCEEEEECCCCCCCCEEECCCCCCCCEECCCCEEEEECCCCCCCCCCCCCEEEEECC VGSVVSYRLDGNQRVIISAFIQEQYARLVKKNSHFWNVSGVKIDASLTGVKVSSESLASI CCCEEEEEECCCCEEEEEHHHHHHHHHHHHCCCCEEEECCEEEECEEEEEEECHHHHHHH LAGGVSFSSDDKADIAKNGDIFSLYDSETTALGGIEINLTMADANGLDKGTRIVYRGINI HHCCCCCCCCCCCHHCCCCCEEEEECCCCEEECCEEEEEEEECCCCCCCCCEEEEECCCH GSILSKQLTANGVIAVAKFEPQYGSLLTNDGVFWLEGADISLSGIKNPERLLTGSVINFL HHHHHHHHCCCCEEEEEEECCCCCCEEECCCEEEEECCCEEECCCCCHHHHHHHHHHHHC PGINTKTAMPSSFALQTKAPDLLQSKKRFLTLTSAENMGISAGAEVRFKQIPIGSVLAVK CCCCCCCCCCCCEEEECCCCHHHHCCCCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEE LTKDLSAVEYQLELQPEFASLIRSDSYFVPESALTVKASLDGVSVKARDFTTLTQGAVSL EECCCCEEEEEEEECHHHHHHHCCCCEECCCCCEEEEEECCCEEEEECCCHHHHHHHHHH IQGHSDTPLAANSALTLFSSVDAATAFYDRQQQVHLTLISQDGADVSQGSPIYYKKMQIG HCCCCCCCCCCCCCEEEEHHCCHHHHHHCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEC TVDTVNWQSKTEDFAIKLAIDKQFQPLLKKPNVFWRNSAVDISASLAGIDVAVAPLQGAL CEEECCCCCCCCCEEEEEEECCCHHHHHHCCCEEEECCCEEEEEEECCCEEEEECCCCCC KGSISLGLLDSNGKASNAANLKLYESKQLALTQAQAIRLTLPASSKLTAKAAIRYQGHQV CCCEEEEEEECCCCCCCCCEEEEEECCCEEEEEEEEEEEECCCCCCCEEEEEEEECCCCC GEVSQVKLNADLNTLTATAYLYGEYAEHFSRSDCEYHLVDAQISLAGIKAPDTLITGPYI CCEEEEEEECCCCEEEEEEEEEHHHHHHCCCCCCEEEEEEEEEEEEECCCCCCEEECCEE GVLPGTSNQKTTQFVANLAASSYANVAEDALKFTLEDNNLGSMKVGTPIFFRGIKVGQID EEECCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCEECCCCEEEECEEEECCC GYHLSTQGNSVLMQAHIEPQYSHLVNQSSQFWDASGIKVDVGLFSGAQIEAGSLETLLAG CEEEECCCCEEEEEEECCCHHHHHHCCCCCCCCCCCCEEEEEECCCCEEECCCHHHHHHC GINVATKDTTQEGNRLAAGTVLRLQHKAENEWQEWAPAQ CCEEEECCCCCCCCEEEEEEEEEEEHHCCCCHHHCCCCC >Mature Secondary Structure TQIESPKVVKKKLFSPIWLLPIVALALGAWLGIKSIKESGVEIQIHFPSATGIDVGKTL CCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHH VKYQGLTVGKVKDIGIDEDLKGVNVKVMMDYRAKPFLNKETLFWLVTPKASITGVEGLDA HHHCCCEEECEEECCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCHHH LFSGNYIAIQPGKGNASTFFEAERQPPPMQIGSEGVMVELTSDKLGSLDVGSPIFFRQIP HHCCCEEEEECCCCCCCCEEECCCCCCCCEECCCCEEEEECCCCCCCCCCCCCEEEEECC VGSVVSYRLDGNQRVIISAFIQEQYARLVKKNSHFWNVSGVKIDASLTGVKVSSESLASI CCCEEEEEECCCCEEEEEHHHHHHHHHHHHCCCCEEEECCEEEECEEEEEEECHHHHHHH LAGGVSFSSDDKADIAKNGDIFSLYDSETTALGGIEINLTMADANGLDKGTRIVYRGINI HHCCCCCCCCCCCHHCCCCCEEEEECCCCEEECCEEEEEEEECCCCCCCCCEEEEECCCH GSILSKQLTANGVIAVAKFEPQYGSLLTNDGVFWLEGADISLSGIKNPERLLTGSVINFL HHHHHHHHCCCCEEEEEEECCCCCCEEECCCEEEEECCCEEECCCCCHHHHHHHHHHHHC PGINTKTAMPSSFALQTKAPDLLQSKKRFLTLTSAENMGISAGAEVRFKQIPIGSVLAVK CCCCCCCCCCCCEEEECCCCHHHHCCCCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEE LTKDLSAVEYQLELQPEFASLIRSDSYFVPESALTVKASLDGVSVKARDFTTLTQGAVSL EECCCCEEEEEEEECHHHHHHHCCCCEECCCCCEEEEEECCCEEEEECCCHHHHHHHHHH IQGHSDTPLAANSALTLFSSVDAATAFYDRQQQVHLTLISQDGADVSQGSPIYYKKMQIG HCCCCCCCCCCCCCEEEEHHCCHHHHHHCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEC TVDTVNWQSKTEDFAIKLAIDKQFQPLLKKPNVFWRNSAVDISASLAGIDVAVAPLQGAL CEEECCCCCCCCCEEEEEEECCCHHHHHHCCCEEEECCCEEEEEEECCCEEEEECCCCCC KGSISLGLLDSNGKASNAANLKLYESKQLALTQAQAIRLTLPASSKLTAKAAIRYQGHQV CCCEEEEEEECCCCCCCCCEEEEEECCCEEEEEEEEEEEECCCCCCCEEEEEEEECCCCC GEVSQVKLNADLNTLTATAYLYGEYAEHFSRSDCEYHLVDAQISLAGIKAPDTLITGPYI CCEEEEEEECCCCEEEEEEEEEHHHHHHCCCCCCEEEEEEEEEEEEECCCCCCEEECCEE GVLPGTSNQKTTQFVANLAASSYANVAEDALKFTLEDNNLGSMKVGTPIFFRGIKVGQID EEECCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCEECCCCEEEECEEEECCC GYHLSTQGNSVLMQAHIEPQYSHLVNQSSQFWDASGIKVDVGLFSGAQIEAGSLETLLAG CEEEECCCCEEEEEEECCCHHHHHHCCCCCCCCCCCCEEEEEECCCCEEECCCHHHHHHC GINVATKDTTQEGNRLAAGTVLRLQHKAENEWQEWAPAQ CCEEEECCCCCCCCEEEEEEEEEEEHHCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]