Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

Click here to switch to the map view.

The map label for this gene is ynbE [C]

Identifier: 160875658

GI number: 160875658

Start: 3012357

End: 3012575

Strand: Direct

Name: ynbE [C]

Synonym: Sbal195_2546

Alternate gene names: 160875658

Gene position: 3012357-3012575 (Clockwise)

Preceding gene: 160875657

Following gene: 160875659

Centisome position: 56.33

GC content: 44.29

Gene sequence:

>219_bases
GTGAAGATAATTCAATTACAGCAAGTTAGCCTAGGTGCCCGAAGCGCGATCGTCGCATTGTTCGCACTCGCCGCATTGCA
GGGCTGTGCGCCCACAGTAAAAATAGAACCGCCGGATAAACCTATCGTTATCAATCTCAATGTGAAAATTGAACATGAGA
TACGGATCAAAGTGGATAAGGAATTAGATCAACTCCTATCAGACGATAAGCTGTTCTAA

Upstream 100 bases:

>100_bases
TCTCATGAAGAGAACATGCTGCAATTATTTAGAAGTCTGCAAATTGGTAATGACTTGCAGGACAGAATCGAAAAATCAGT
GAAGTAACAAGGAAACCTCA

Downstream 100 bases:

>100_bases
TTTAATAAGAATTGAGGAATCACCATGAAATCAATCCGACTAAAAACAAAGTTATTATTGCTATTAACCCTCAGCGTCTT
AAGCCTCAGTGCTTTTGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 72; Mature: 72

Protein sequence:

>72_residues
MKIIQLQQVSLGARSAIVALFALAALQGCAPTVKIEPPDKPIVINLNVKIEHEIRIKVDKELDQLLSDDKLF

Sequences:

>Translated_72_residues
MKIIQLQQVSLGARSAIVALFALAALQGCAPTVKIEPPDKPIVINLNVKIEHEIRIKVDKELDQLLSDDKLF
>Mature_72_residues
MKIIQLQQVSLGARSAIVALFALAALQGCAPTVKIEPPDKPIVINLNVKIEHEIRIKVDKELDQLLSDDKLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7962; Mature: 7962

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIIQLQQVSLGARSAIVALFALAALQGCAPTVKIEPPDKPIVINLNVKIEHEIRIKVDK
CCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEEEEEEEEEEEECH
ELDQLLSDDKLF
HHHHHHCCCCCC
>Mature Secondary Structure
MKIIQLQQVSLGARSAIVALFALAALQGCAPTVKIEPPDKPIVINLNVKIEHEIRIKVDK
CCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEEEEEEEEEEEECH
ELDQLLSDDKLF
HHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA