| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875564
Identifier: 160875564
GI number: 160875564
Start: 2899070
End: 2900725
Strand: Direct
Name: 160875564
Synonym: Sbal195_2452
Alternate gene names: NA
Gene position: 2899070-2900725 (Clockwise)
Preceding gene: 160875560
Following gene: 160875565
Centisome position: 54.22
GC content: 47.89
Gene sequence:
>1656_bases ATGTCTTCGAATCATCAACAGGCTAATCAAAAAGATAGCCATCAAGCTGTCACGCCTCAGACGCAGCATTCATTCAAGCA ACAACCTGAGCTGAATTTCTGGCAAATTTTTAATATGTGCTTCGGTTTTTTAGGCATTCAATTTGGTTTTGCCCTGCAAA ATGCTAACGTCAGCCGCATTTTCCAAACCTTAGGTGCATCTATCGATGAAATCCCCATTCTGTGGATTGCCGCGCCGCTG ACGGGTTTATTGGTTCAACCTATTATTGGTTATTTGAGTGATAAAACCTGGGGACGCCTTGGCCGTCGCCGCCCTTATTT TTTGATTGGCGCGATTTTTACCACTCTTGCTATTTTTATCATGCCGCACTCGCCTACCCTGTGGATTGCCGCGGGCATGT TATGGATCATGGATGCCTCGATCAACATCGCCATGGAGCCGTTTCGCGCTTTCGTTGGTGACAATTTACCGAAAAGCCAG CGTACCCAAGGCTATGCCATGCAAAGCTTTTTCATCGGTATTGGCGCTGTGGTCGCTTCGGCCTTACCCTATATTTTGAC TCACTTTTTTGCTGTCGCGAATACTGCACCAGCGGGTGAAATTGCCGACTCAGTGCGTTATGCCTTCTATTTCGGTGGCG CAGTGTTATTGCTCGCGGTTACTTGGACTGTCGTATCGACAAGAGAATATTCCCCCGAAGAGTTAGCCGCCTTTAACGCA AAACAAGTCGATGCTGAGGATGAAACCTTAGCTCGCACTCGTACCCGTAAGGATTATCAATTTGCGTCCTTCGTGTGGAT GGGTCTCGGCGCCCTGCTCACCTTCGCTATTTGGGCGCAGGATTTAGATAAGCAACTGTATATCTTAAGCTTAGGGATTT TTGCCTTTGGCCCATTGCAACTGTATTGCGCGCTGCGTTTGGGCAATTCACAACCCGCTGAACGCAATAAGCTCGGCATG GTATTTAGCGTGGTCGATGACTTATTCCATATGCCCAAAGCCATGCATCAACTGGCGATAGTGCAGTTTTTCTCTTGGTT TGCGTTGTTTGCCATGTGGATTTACACCACAGCAGCCGTGACGTCTTACCATTTTGGCAGTAGCGATGTGTTGTCCCAAG CCTACAACGACGGCGCAGATTGGGTCGGCGTGCTGTTCGCCTCCTACAATGGTTTTGCCGCCATTGCCGCGATCTTTATT CCTATGCTGGCTAAGCGTATCGGTATCAAACTGACGCACACAGTCAATATGTTCTGTGGCGGTATAGGCTTGATTAGCTT CTTCTTTATTAAAGACCCAAGCCTGTTATGGCTGCCTATGATAGGTGTCGGTATCGCGTGGGCGTCAATATTATCTGTGC CCTACGCCATGTTGTCGGGCATGTTACCCCCGCAAAAAATGGGCGTTTATATGGGGATTTTTAACTTCTTCATCGTGATC CCGCAGCTTCTTGCCGCCAGTGTGCTGGGTTTAGTGCTCAATGGTCTGTTCGATGGTCAACCTATTTATGCGTTGATCAC AGGTGGCGTCTTGATGATGTGCGCTGGTATTGCAGTACTTTTTGTTGAGCAAGAGATTGTGGATCAAAATGACCAAAGCG CCGCCGTAAATAGCAAAACCAACTTAACCACAAAAGCCGCAGACAAAGTTAACTGA
Upstream 100 bases:
>100_bases CACATAAAAGCAAAGTACAGTGCCAATCCATTGCTCGGCAAACAATTAAAACAATAAGCACTCAAGGCAGAAATACTGCC GGCAACAGAAAGGAAGTTCA
Downstream 100 bases:
>100_bases CAGTTCACTAAGTGCTGTGGCGCTGAATAAGATGGCACTCAATTAAGTGCCATCTCCTTAAGTGAGGCTCTTTTAGATGC CAGGCCGTTAGATAACAGTC
Product: major facilitator transporter
Products: NA
Alternate protein names: Sugar Transporter; Transporter Facilitator Family; Facilitator Superfamily Permease; Facilitator Superfamily Protein; SugarCation Symporter; Facilitator Superfamily Transporter Permease; Cytoplasmic Membrane Maltose Transporter MalY; Transport Protein Facilitator Superfamily Protein; MFS Superfamily Sugcific Permease; Facilitator Superfamily Transmembrane Protein; Facilitator Family Transporter; Sucrose Transporter Protein
Number of amino acids: Translated: 551; Mature: 550
Protein sequence:
>551_residues MSSNHQQANQKDSHQAVTPQTQHSFKQQPELNFWQIFNMCFGFLGIQFGFALQNANVSRIFQTLGASIDEIPILWIAAPL TGLLVQPIIGYLSDKTWGRLGRRRPYFLIGAIFTTLAIFIMPHSPTLWIAAGMLWIMDASINIAMEPFRAFVGDNLPKSQ RTQGYAMQSFFIGIGAVVASALPYILTHFFAVANTAPAGEIADSVRYAFYFGGAVLLLAVTWTVVSTREYSPEELAAFNA KQVDAEDETLARTRTRKDYQFASFVWMGLGALLTFAIWAQDLDKQLYILSLGIFAFGPLQLYCALRLGNSQPAERNKLGM VFSVVDDLFHMPKAMHQLAIVQFFSWFALFAMWIYTTAAVTSYHFGSSDVLSQAYNDGADWVGVLFASYNGFAAIAAIFI PMLAKRIGIKLTHTVNMFCGGIGLISFFFIKDPSLLWLPMIGVGIAWASILSVPYAMLSGMLPPQKMGVYMGIFNFFIVI PQLLAASVLGLVLNGLFDGQPIYALITGGVLMMCAGIAVLFVEQEIVDQNDQSAAVNSKTNLTTKAADKVN
Sequences:
>Translated_551_residues MSSNHQQANQKDSHQAVTPQTQHSFKQQPELNFWQIFNMCFGFLGIQFGFALQNANVSRIFQTLGASIDEIPILWIAAPL TGLLVQPIIGYLSDKTWGRLGRRRPYFLIGAIFTTLAIFIMPHSPTLWIAAGMLWIMDASINIAMEPFRAFVGDNLPKSQ RTQGYAMQSFFIGIGAVVASALPYILTHFFAVANTAPAGEIADSVRYAFYFGGAVLLLAVTWTVVSTREYSPEELAAFNA KQVDAEDETLARTRTRKDYQFASFVWMGLGALLTFAIWAQDLDKQLYILSLGIFAFGPLQLYCALRLGNSQPAERNKLGM VFSVVDDLFHMPKAMHQLAIVQFFSWFALFAMWIYTTAAVTSYHFGSSDVLSQAYNDGADWVGVLFASYNGFAAIAAIFI PMLAKRIGIKLTHTVNMFCGGIGLISFFFIKDPSLLWLPMIGVGIAWASILSVPYAMLSGMLPPQKMGVYMGIFNFFIVI PQLLAASVLGLVLNGLFDGQPIYALITGGVLMMCAGIAVLFVEQEIVDQNDQSAAVNSKTNLTTKAADKVN >Mature_550_residues SSNHQQANQKDSHQAVTPQTQHSFKQQPELNFWQIFNMCFGFLGIQFGFALQNANVSRIFQTLGASIDEIPILWIAAPLT GLLVQPIIGYLSDKTWGRLGRRRPYFLIGAIFTTLAIFIMPHSPTLWIAAGMLWIMDASINIAMEPFRAFVGDNLPKSQR TQGYAMQSFFIGIGAVVASALPYILTHFFAVANTAPAGEIADSVRYAFYFGGAVLLLAVTWTVVSTREYSPEELAAFNAK QVDAEDETLARTRTRKDYQFASFVWMGLGALLTFAIWAQDLDKQLYILSLGIFAFGPLQLYCALRLGNSQPAERNKLGMV FSVVDDLFHMPKAMHQLAIVQFFSWFALFAMWIYTTAAVTSYHFGSSDVLSQAYNDGADWVGVLFASYNGFAAIAAIFIP MLAKRIGIKLTHTVNMFCGGIGLISFFFIKDPSLLWLPMIGVGIAWASILSVPYAMLSGMLPPQKMGVYMGIFNFFIVIP QLLAASVLGLVLNGLFDGQPIYALITGGVLMMCAGIAVLFVEQEIVDQNDQSAAVNSKTNLTTKAADKVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60711; Mature: 60579
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSNHQQANQKDSHQAVTPQTQHSFKQQPELNFWQIFNMCFGFLGIQFGFALQNANVSRI CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHH FQTLGASIDEIPILWIAAPLTGLLVQPIIGYLSDKTWGRLGRRRPYFLIGAIFTTLAIFI HHHHCCCCCCCCHHEEHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHH MPHSPTLWIAAGMLWIMDASINIAMEPFRAFVGDNLPKSQRTQGYAMQSFFIGIGAVVAS CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH ALPYILTHFFAVANTAPAGEIADSVRYAFYFGGAVLLLAVTWTVVSTREYSPEELAAFNA HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCC KQVDAEDETLARTRTRKDYQFASFVWMGLGALLTFAIWAQDLDKQLYILSLGIFAFGPLQ HHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEHHHHHHHHHH LYCALRLGNSQPAERNKLGMVFSVVDDLFHMPKAMHQLAIVQFFSWFALFAMWIYTTAAV HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSYHFGSSDVLSQAYNDGADWVGVLFASYNGFAAIAAIFIPMLAKRIGIKLTHTVNMFCG HHHCCCCHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEEHHHHHHH GIGLISFFFIKDPSLLWLPMIGVGIAWASILSVPYAMLSGMLPPQKMGVYMGIFNFFIVI HHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH PQLLAASVLGLVLNGLFDGQPIYALITGGVLMMCAGIAVLFVEQEIVDQNDQSAAVNSKT HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC NLTTKAADKVN CCCCCCCCCCC >Mature Secondary Structure SSNHQQANQKDSHQAVTPQTQHSFKQQPELNFWQIFNMCFGFLGIQFGFALQNANVSRI CCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHH FQTLGASIDEIPILWIAAPLTGLLVQPIIGYLSDKTWGRLGRRRPYFLIGAIFTTLAIFI HHHHCCCCCCCCHHEEHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHH MPHSPTLWIAAGMLWIMDASINIAMEPFRAFVGDNLPKSQRTQGYAMQSFFIGIGAVVAS CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH ALPYILTHFFAVANTAPAGEIADSVRYAFYFGGAVLLLAVTWTVVSTREYSPEELAAFNA HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCC KQVDAEDETLARTRTRKDYQFASFVWMGLGALLTFAIWAQDLDKQLYILSLGIFAFGPLQ HHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEHHHHHHHHHH LYCALRLGNSQPAERNKLGMVFSVVDDLFHMPKAMHQLAIVQFFSWFALFAMWIYTTAAV HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSYHFGSSDVLSQAYNDGADWVGVLFASYNGFAAIAAIFIPMLAKRIGIKLTHTVNMFCG HHHCCCCHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEEHHHHHHH GIGLISFFFIKDPSLLWLPMIGVGIAWASILSVPYAMLSGMLPPQKMGVYMGIFNFFIVI HHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH PQLLAASVLGLVLNGLFDGQPIYALITGGVLMMCAGIAVLFVEQEIVDQNDQSAAVNSKT HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC NLTTKAADKVN CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA