| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160875455
Identifier: 160875455
GI number: 160875455
Start: 2763414
End: 2764364
Strand: Direct
Name: 160875455
Synonym: Sbal195_2343
Alternate gene names: NA
Gene position: 2763414-2764364 (Clockwise)
Preceding gene: 160875454
Following gene: 160875463
Centisome position: 51.68
GC content: 46.06
Gene sequence:
>951_bases ATGCCTAAGTCTCATACCCATATGCACCAACATTTGCAGATGCCGCATTCGCGAGTCGAACTGCACACTTTGGCGCGCGA ACTTGCCTTCGAGCAAGTGACCATTATTGGGAATGCTTCTGGCAATTGGCAGCCTGCGACTACGGGCACGACATTTATCT TCAACGGCACTCAATGGAATGAGAAAAGTAACCCAAATAATCAGATAGTGAATATCGCTAATGGCGGTTTTGCCGAATCA AAATATGCTTTTGTGGTACAAGGTCACCCGCAAAATGATTTGCTTACCCAAGCTTTGACACAAGTTGCTATTGAATTAAC GCCTCAGCTTGGCTGCTGGCCTTCATCTGGCTTAACCACAATTGTGTTGATGCAGCAGTTATCTCAGCATGTGCAAGTGC AGCGGATGTCGCTGTTTCCGAGTTTAGCAAGGCCCAATGATTTACCGCCAGAAGATCACTTACCTTGTATGGTGCATAAT TGGTTAGGCGAGCGGCGGATTGCGCAGACGTTCGCAACCGCACTCGACTGGCCGGAGTTCACCTTGCCAGCAGTTTGTTT AGCAAACTTAGCGGCAGTCAATAAAGCGCGTGGATCCCAAACTTCAATGATGATGAAAACGGGCAATCCTTTTGATTTAC TAGCGCGTTTACAAGAATCAACCCCATCGGCAGATATGCCACATTCCGCAAAACACATACAACTCGATTGGTTGATTACG CTGGCTCATACGCCTATCGACGTTTGGCTGAAATATGCGGATTTAAAACAAGTTATCAATGCCGAAGCATTATTTTTTAA TCACATGCCAGAATCAAAACCCAGCTATTGGTATTTAATGGATACTCAGGCGTCCCAATATCTCGATGCTATTCGCCACA GTTTGGCCTATTGCTGGCAAACACTTTCGACTAAGCAAAACGGCACGACTCACGCCATCACTTATCGTTAA
Upstream 100 bases:
>100_bases AACATCATCCGGTAAACGACAGAGGATTAAGCCTTTGGGCTCAGGGAGATATCCATTACAATGAAGGTCATTTTGAGTCC GTGAAACAGATATTCAGCCT
Downstream 100 bases:
>100_bases CAGTTAATTCAGGTTTGAATTTGTCGACTCGCCAACTAAGCTTGTACTCGCATCACACTGCCATTTACCGTATTTTGACG TACTTTCAAAAGATTATAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MPKSHTHMHQHLQMPHSRVELHTLARELAFEQVTIIGNASGNWQPATTGTTFIFNGTQWNEKSNPNNQIVNIANGGFAES KYAFVVQGHPQNDLLTQALTQVAIELTPQLGCWPSSGLTTIVLMQQLSQHVQVQRMSLFPSLARPNDLPPEDHLPCMVHN WLGERRIAQTFATALDWPEFTLPAVCLANLAAVNKARGSQTSMMMKTGNPFDLLARLQESTPSADMPHSAKHIQLDWLIT LAHTPIDVWLKYADLKQVINAEALFFNHMPESKPSYWYLMDTQASQYLDAIRHSLAYCWQTLSTKQNGTTHAITYR
Sequences:
>Translated_316_residues MPKSHTHMHQHLQMPHSRVELHTLARELAFEQVTIIGNASGNWQPATTGTTFIFNGTQWNEKSNPNNQIVNIANGGFAES KYAFVVQGHPQNDLLTQALTQVAIELTPQLGCWPSSGLTTIVLMQQLSQHVQVQRMSLFPSLARPNDLPPEDHLPCMVHN WLGERRIAQTFATALDWPEFTLPAVCLANLAAVNKARGSQTSMMMKTGNPFDLLARLQESTPSADMPHSAKHIQLDWLIT LAHTPIDVWLKYADLKQVINAEALFFNHMPESKPSYWYLMDTQASQYLDAIRHSLAYCWQTLSTKQNGTTHAITYR >Mature_315_residues PKSHTHMHQHLQMPHSRVELHTLARELAFEQVTIIGNASGNWQPATTGTTFIFNGTQWNEKSNPNNQIVNIANGGFAESK YAFVVQGHPQNDLLTQALTQVAIELTPQLGCWPSSGLTTIVLMQQLSQHVQVQRMSLFPSLARPNDLPPEDHLPCMVHNW LGERRIAQTFATALDWPEFTLPAVCLANLAAVNKARGSQTSMMMKTGNPFDLLARLQESTPSADMPHSAKHIQLDWLITL AHTPIDVWLKYADLKQVINAEALFFNHMPESKPSYWYLMDTQASQYLDAIRHSLAYCWQTLSTKQNGTTHAITYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35589; Mature: 35458
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKSHTHMHQHLQMPHSRVELHTLARELAFEQVTIIGNASGNWQPATTGTTFIFNGTQWN CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCEEEECCCCCC EKSNPNNQIVNIANGGFAESKYAFVVQGHPQNDLLTQALTQVAIELTPQLGCWPSSGLTT CCCCCCCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHH IVLMQQLSQHVQVQRMSLFPSLARPNDLPPEDHLPCMVHNWLGERRIAQTFATALDWPEF HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCH TLPAVCLANLAAVNKARGSQTSMMMKTGNPFDLLARLQESTPSADMPHSAKHIQLDWLIT HHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEE LAHTPIDVWLKYADLKQVINAEALFFNHMPESKPSYWYLMDTQASQYLDAIRHSLAYCWQ EECCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHH TLSTKQNGTTHAITYR HHCCCCCCCEEEEEEC >Mature Secondary Structure PKSHTHMHQHLQMPHSRVELHTLARELAFEQVTIIGNASGNWQPATTGTTFIFNGTQWN CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCEEEECCCCCC EKSNPNNQIVNIANGGFAESKYAFVVQGHPQNDLLTQALTQVAIELTPQLGCWPSSGLTT CCCCCCCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHH IVLMQQLSQHVQVQRMSLFPSLARPNDLPPEDHLPCMVHNWLGERRIAQTFATALDWPEF HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCH TLPAVCLANLAAVNKARGSQTSMMMKTGNPFDLLARLQESTPSADMPHSAKHIQLDWLIT HHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEE LAHTPIDVWLKYADLKQVINAEALFFNHMPESKPSYWYLMDTQASQYLDAIRHSLAYCWQ EECCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHH TLSTKQNGTTHAITYR HHCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA