| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is fpvA [H]
Identifier: 160875454
GI number: 160875454
Start: 2761158
End: 2763239
Strand: Direct
Name: fpvA [H]
Synonym: Sbal195_2342
Alternate gene names: 160875454
Gene position: 2761158-2763239 (Clockwise)
Preceding gene: 160875446
Following gene: 160875455
Centisome position: 51.64
GC content: 43.76
Gene sequence:
>2082_bases ATGCATAAAACGTTATTAGCTACACTCATTTCAGGCCTGTTATTTGCCTCGAGTTTGTACGCTGAAGAGACAGAATCCGA CGCCAATATTGAAGTGATCAGTATTAAAGGAAGTCGTTTAGATAAAGCAGCGACTGCAACGGGATTGCCTTTAACACTGA GAGATACACCCCAGTCGGTTACGATTATAGATCAAGAGTTTATTCAGAGTTTTTCACTTAACAATGTCGCCGACTTAATG TTTCTAACACCGGGTATTTCGGCTCAAAAAATAGAAACTAATCGGTACTTTTTTAGTGCCCGCGGTAATCCTATCACTAA CTTTCAATTTGATGGCGTGCCAGTTAACTACTCAAGTTTCTTTAATGATGCTTCGACCGATACCGTTATCTTCGATCGCG TTGAAGTGGTGCGGGGCGCAACGGGATTATTAACCGGAGCAGGTGAACCCTCTGCCGCCATCAACCTCATTCGTAAACGT CCAAAGTCATCACCTGGTGGTTATCTCAGCGCCAAACTAGGTTCATGGGACAGTTACCGTGTTGAAGGCGACAGTTCAGT CGACATAACAGATGATGGTGACGTTCAAGCGAGATTTGCAGCTGCCTATGAGAAATCTGACAGTTTTACCGATCTTGCTG AGGATGAAAACCTGCAAATATATGGCGTTGTTACTGCACGATTAAGTGACAGTACTTTATTCACTTTAGGAGCGGATTAT AGTGACCGCGATCCTAAAGGCTCCACTTGGGGTGCGCTGCCACTCTTTTATGCCGATGGCAGCCTAGCCAATGACCTTCC CCGTTCAACAACCACTGCGGCATCTTGGTCCAGTTGGAAGCGTCATGGCACAAACGTTTTCTCTACTTTAGAACATAGCT TCGAAAATAATTGGGAGCTCAAACTCGACATTGAACATCGCGAAGACAAGATGGATGGCCACTTGTTATTTTTGTATGGT GCCCCAGATAAAACCACAGGTTTAGGTATGGGTGCGTCGCCCATGATCTACCAATCAACTCGTAAGCAGGATGCAGCGCG ATTATTTGCTTCTGGTCCATTCGAGTTATTTGGTCGAGAACATAAACTGACAACTGGTCTACTCTATTCAAAACAAGATA TTAGCGCAGATTCTTACTACACGACCGATGTTTTAAGCGTAGGGAACTTCTTTGAGTGGGATGGTTCTATTGCAGAACCA AACTACCCATCGACACCTACCACTCAAGAGACTGAAGAGATCCAGAAAGGCGCCTATATCGCCACTCAACTCAGTTTGCA TGATCAGTTGACTCTGTTACTGGGGAGTCGTATTAGTCAATACAAAATCGACCCAGGTTATGAGCACAATGATGTCATCA CCCCTTATGCGGGACTCGTGTATGACATCACTGACAGCGTCTCACTCTATACCAGTTACACCGAAATTTTTCAGCCCCAA GACGCAAAAGATGCCAATAATAAACGCCTAGATCCGACAACTGGCAATAACATAGAGCTTGGTAGTAAAGCTGATTTCTT CGACGAAAGACTCACCGCCAGTGTGGCAGTATTTAAAGTTCAAAAAGAAAATGTGGCAGAAAGAGATCCTAATTTTAAAG ATCCACTTCCAGATGGTAGCTTTCCAATGCGTGCAGTGGATGGTACCAGTAACCGCGGTTTCGAAATGGAGTTAACGGGG AGACCTACAGAAGATTGGGATCTGTACTTCAGTTACACCTACAGTGAATCTGAAAAAGCCAATGGTGAAGCCTTTGGTAC GCATTTGCCTAAAAACTTAGTGCGATTATCTACACTTTATCATTTTAATGGTGCTCTCGAAGATCTCACATTGGGTGGTA ACTTAAGCTGGCAGAGCAAGATTTATGTAGAAAATGCAGGTCCTAACGGCGCAAGCTCTGAACAAGACAGTTACTTCATT GCCAACCTGATGGCGAGTTATCAAATTACAGACGATGCAATTGTCCGCTTGAATATTAGAAACGTTTTTGATGAAAAGTA CTACTCCAGTATCGATTTCTACGATCAAGGATTCTTCGGAGAGCCGAGAAATGTTGAACTTAGTCTGAGCTACAATTTCT GA
Upstream 100 bases:
>100_bases CCGAGAGTGTAAAGGTAATGCAAATTGTTATCAATACGATGTACCGGTAATTGTTTTCAATTAGAATGCCGGTCACAAAA TACTATGATGGGGAATCATG
Downstream 100 bases:
>100_bases TCTTCTTACTCCTTAGGGATACCGCGCATCGCTTTTATACGCGGCATCCCTAAGGCGACACTATCATGTGTTAAAACATC ATCCGGTAAACGACAGAGGA
Product: TonB-dependent siderophore receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 693; Mature: 693
Protein sequence:
>693_residues MHKTLLATLISGLLFASSLYAEETESDANIEVISIKGSRLDKAATATGLPLTLRDTPQSVTIIDQEFIQSFSLNNVADLM FLTPGISAQKIETNRYFFSARGNPITNFQFDGVPVNYSSFFNDASTDTVIFDRVEVVRGATGLLTGAGEPSAAINLIRKR PKSSPGGYLSAKLGSWDSYRVEGDSSVDITDDGDVQARFAAAYEKSDSFTDLAEDENLQIYGVVTARLSDSTLFTLGADY SDRDPKGSTWGALPLFYADGSLANDLPRSTTTAASWSSWKRHGTNVFSTLEHSFENNWELKLDIEHREDKMDGHLLFLYG APDKTTGLGMGASPMIYQSTRKQDAARLFASGPFELFGREHKLTTGLLYSKQDISADSYYTTDVLSVGNFFEWDGSIAEP NYPSTPTTQETEEIQKGAYIATQLSLHDQLTLLLGSRISQYKIDPGYEHNDVITPYAGLVYDITDSVSLYTSYTEIFQPQ DAKDANNKRLDPTTGNNIELGSKADFFDERLTASVAVFKVQKENVAERDPNFKDPLPDGSFPMRAVDGTSNRGFEMELTG RPTEDWDLYFSYTYSESEKANGEAFGTHLPKNLVRLSTLYHFNGALEDLTLGGNLSWQSKIYVENAGPNGASSEQDSYFI ANLMASYQITDDAIVRLNIRNVFDEKYYSSIDFYDQGFFGEPRNVELSLSYNF
Sequences:
>Translated_693_residues MHKTLLATLISGLLFASSLYAEETESDANIEVISIKGSRLDKAATATGLPLTLRDTPQSVTIIDQEFIQSFSLNNVADLM FLTPGISAQKIETNRYFFSARGNPITNFQFDGVPVNYSSFFNDASTDTVIFDRVEVVRGATGLLTGAGEPSAAINLIRKR PKSSPGGYLSAKLGSWDSYRVEGDSSVDITDDGDVQARFAAAYEKSDSFTDLAEDENLQIYGVVTARLSDSTLFTLGADY SDRDPKGSTWGALPLFYADGSLANDLPRSTTTAASWSSWKRHGTNVFSTLEHSFENNWELKLDIEHREDKMDGHLLFLYG APDKTTGLGMGASPMIYQSTRKQDAARLFASGPFELFGREHKLTTGLLYSKQDISADSYYTTDVLSVGNFFEWDGSIAEP NYPSTPTTQETEEIQKGAYIATQLSLHDQLTLLLGSRISQYKIDPGYEHNDVITPYAGLVYDITDSVSLYTSYTEIFQPQ DAKDANNKRLDPTTGNNIELGSKADFFDERLTASVAVFKVQKENVAERDPNFKDPLPDGSFPMRAVDGTSNRGFEMELTG RPTEDWDLYFSYTYSESEKANGEAFGTHLPKNLVRLSTLYHFNGALEDLTLGGNLSWQSKIYVENAGPNGASSEQDSYFI ANLMASYQITDDAIVRLNIRNVFDEKYYSSIDFYDQGFFGEPRNVELSLSYNF >Mature_693_residues MHKTLLATLISGLLFASSLYAEETESDANIEVISIKGSRLDKAATATGLPLTLRDTPQSVTIIDQEFIQSFSLNNVADLM FLTPGISAQKIETNRYFFSARGNPITNFQFDGVPVNYSSFFNDASTDTVIFDRVEVVRGATGLLTGAGEPSAAINLIRKR PKSSPGGYLSAKLGSWDSYRVEGDSSVDITDDGDVQARFAAAYEKSDSFTDLAEDENLQIYGVVTARLSDSTLFTLGADY SDRDPKGSTWGALPLFYADGSLANDLPRSTTTAASWSSWKRHGTNVFSTLEHSFENNWELKLDIEHREDKMDGHLLFLYG APDKTTGLGMGASPMIYQSTRKQDAARLFASGPFELFGREHKLTTGLLYSKQDISADSYYTTDVLSVGNFFEWDGSIAEP NYPSTPTTQETEEIQKGAYIATQLSLHDQLTLLLGSRISQYKIDPGYEHNDVITPYAGLVYDITDSVSLYTSYTEIFQPQ DAKDANNKRLDPTTGNNIELGSKADFFDERLTASVAVFKVQKENVAERDPNFKDPLPDGSFPMRAVDGTSNRGFEMELTG RPTEDWDLYFSYTYSESEKANGEAFGTHLPKNLVRLSTLYHFNGALEDLTLGGNLSWQSKIYVENAGPNGASSEQDSYFI ANLMASYQITDDAIVRLNIRNVFDEKYYSSIDFYDQGFFGEPRNVELSLSYNF
Specific function: Receptor for the siderophore ferripyoverdine [H]
COG id: COG4773
COG function: function code P; Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1787344, Length=726, Percent_Identity=34.7107438016529, Blast_Score=417, Evalue=1e-117, Organism=Escherichia coli, GI1786344, Length=705, Percent_Identity=23.4042553191489, Blast_Score=122, Evalue=8e-29, Organism=Escherichia coli, GI1787024, Length=253, Percent_Identity=23.7154150197628, Blast_Score=75, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR011662 - InterPro: IPR000531 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF07660 STN; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 76846; Mature: 76846
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKTLLATLISGLLFASSLYAEETESDANIEVISIKGSRLDKAATATGLPLTLRDTPQSV CCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHCCCCEEEECCCCCEE TIIDQEFIQSFSLNNVADLMFLTPGISAQKIETNRYFFSARGNPITNFQFDGVPVNYSSF EEEEHHHHHHCCCCCCEEEEEECCCCCCEEEECCEEEEEECCCCCCCEEECCEECCHHHH FNDASTDTVIFDRVEVVRGATGLLTGAGEPSAAINLIRKRPKSSPGGYLSAKLGSWDSYR CCCCCCCEEEEEHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCEE VEGDSSVDITDDGDVQARFAAAYEKSDSFTDLAEDENLQIYGVVTARLSDSTLFTLGADY ECCCCEEEECCCCCCEEEEEEHHHCCCCCCCCCCCCCEEEEEEEEEEECCCEEEEEECCC SDRDPKGSTWGALPLFYADGSLANDLPRSTTTAASWSSWKRHGTNVFSTLEHSFENNWEL CCCCCCCCCCCCCEEEEECCCHHCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCCCEE KLDIEHREDKMDGHLLFLYGAPDKTTGLGMGASPMIYQSTRKQDAARLFASGPFELFGRE EEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCHHHCCCC HKLTTGLLYSKQDISADSYYTTDVLSVGNFFEWDGSIAEPNYPSTPTTQETEEIQKGAYI CCEEEEEEEECCCCCCCCEEEHHHHHCCCEEECCCCCCCCCCCCCCCCCHHHHHHCCCEE ATQLSLHDQLTLLLGSRISQYKIDPGYEHNDVITPYAGLVYDITDSVSLYTSYTEIFQPQ EEEECHHHHHHHHHCCCCCEEECCCCCCCCCEECCCCCEEEEECCCEEEEECHHHHCCCC DAKDANNKRLDPTTGNNIELGSKADFFDERLTASVAVFKVQKENVAERDPNFKDPLPDGS CCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHEEEEEEEEEHHHHHHCCCCCCCCCCCCC FPMRAVDGTSNRGFEMELTGRPTEDWDLYFSYTYSESEKANGEAFGTHLPKNLVRLSTLY CCEEEECCCCCCCEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHH HFNGALEDLTLGGNLSWQSKIYVENAGPNGASSEQDSYFIANLMASYQITDDAIVRLNIR HCCCCHHEEEECCCCCCCEEEEEEECCCCCCCCCCCCEEEEEHHHHEEECCCEEEEEEHH NVFDEKYYSSIDFYDQGFFGEPRNVELSLSYNF HHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECC >Mature Secondary Structure MHKTLLATLISGLLFASSLYAEETESDANIEVISIKGSRLDKAATATGLPLTLRDTPQSV CCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHCCCCEEEECCCCCEE TIIDQEFIQSFSLNNVADLMFLTPGISAQKIETNRYFFSARGNPITNFQFDGVPVNYSSF EEEEHHHHHHCCCCCCEEEEEECCCCCCEEEECCEEEEEECCCCCCCEEECCEECCHHHH FNDASTDTVIFDRVEVVRGATGLLTGAGEPSAAINLIRKRPKSSPGGYLSAKLGSWDSYR CCCCCCCEEEEEHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCEE VEGDSSVDITDDGDVQARFAAAYEKSDSFTDLAEDENLQIYGVVTARLSDSTLFTLGADY ECCCCEEEECCCCCCEEEEEEHHHCCCCCCCCCCCCCEEEEEEEEEEECCCEEEEEECCC SDRDPKGSTWGALPLFYADGSLANDLPRSTTTAASWSSWKRHGTNVFSTLEHSFENNWEL CCCCCCCCCCCCCEEEEECCCHHCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCCCEE KLDIEHREDKMDGHLLFLYGAPDKTTGLGMGASPMIYQSTRKQDAARLFASGPFELFGRE EEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCHHHCCCC HKLTTGLLYSKQDISADSYYTTDVLSVGNFFEWDGSIAEPNYPSTPTTQETEEIQKGAYI CCEEEEEEEECCCCCCCCEEEHHHHHCCCEEECCCCCCCCCCCCCCCCCHHHHHHCCCEE ATQLSLHDQLTLLLGSRISQYKIDPGYEHNDVITPYAGLVYDITDSVSLYTSYTEIFQPQ EEEECHHHHHHHHHCCCCCEEECCCCCCCCCEECCCCCEEEEECCCEEEEECHHHHCCCC DAKDANNKRLDPTTGNNIELGSKADFFDERLTASVAVFKVQKENVAERDPNFKDPLPDGS CCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHEEEEEEEEEHHHHHHCCCCCCCCCCCCC FPMRAVDGTSNRGFEMELTGRPTEDWDLYFSYTYSESEKANGEAFGTHLPKNLVRLSTLY CCEEEECCCCCCCEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHH HFNGALEDLTLGGNLSWQSKIYVENAGPNGASSEQDSYFIANLMASYQITDDAIVRLNIR HCCCCHHEEEECCCCCCCEEEEEEECCCCCCCCCCCCEEEEEHHHHEEECCCEEEEEEHH NVFDEKYYSSIDFYDQGFFGEPRNVELSLSYNF HHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8335619; 8918232; 10984043 [H]