| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is ald [H]
Identifier: 160875437
GI number: 160875437
Start: 2743934
End: 2745049
Strand: Direct
Name: ald [H]
Synonym: Sbal195_2325
Alternate gene names: 160875437
Gene position: 2743934-2745049 (Clockwise)
Preceding gene: 160875429
Following gene: 160875438
Centisome position: 51.31
GC content: 45.88
Gene sequence:
>1116_bases ATGATTATTGGTGTTCCCAAGGAAATTAAAAACCACGAATATCGTGTCGGTATGGTTCCTTCTAGTGTTCGCGAGTTAGC GATCAAAGGTCACGAAGTTTTTGTAGAAACAAATGCTGGCACAGGTATTGGTTTTTCAGATCAAGATTATATTGATGCTG GCGCCAAAATTTTAGCGACTGCTGCTGAAGTTTTTGCTAAAGCGCAGATGATTGTAAAAGTAAAAGAGCCTCAAGCAGTT GAACGCGCTATGTTACGTCACGATCAGATTTTATTTACTTATCTGCATCTTGCGCCAGATTTACCGCAAACTGAAGATTT AATTAAAAGTGGTGCCGTATGTATCGCTTACGAAACTGTGACTGACGACCGTGGTGGCCTGCCCTTACTTGCCCCAATGT CAGAAGTTGCTGGCCGTATGTCCATCCAAGCTGGCGCTATGGCATTAGAGAAATCTTCTGGTGGTCGCGGTATGTTACTG GGCGGCGTTCCAGGTGTTGAACCGGCTAAAGTCGTTATCATTGGCGGCGGTATGGTTGGTACTAACGCTGCACAAATGGC GGTTGGCTTGGGTGCTGATGTGGTTGTACTTGACCGTAGCATTGATGCACTGCGTCGCTTAAATGTGCAATTCGGCTCTG CCGTAAAAGCCATTTACTCTACTGCTGATGCAATTGAACGTCATGTTATTGAAGCTGATCTTGTGATCGGTGGCGTACTG ATCCCAGGTGCTGCGGCACCCAAATTGGTTACCCGTAGCATGATTTCCCGTATGAAGCCGGGAAGCGCCATCGTTGACGT AGCAATCGATCAAGGCGGTTGTGTTGAAACTTCACACGCAACGACTCACCAAGATCCGACTTATATCGTTGATGATGTTG TGCATTACTGTGTGGCGAACATGCCAGGTGCGGTTGCTCGTACTTCAACTTTCGCACTTAACAATGCAACGCTACCGTAT ATTCTTAAGTTAGCTAACTTAGGCTATAAAGAAGCGCTGTTGCATGACAAGCACTTATTGAATGGCTTAAACGTGATGCA CGGTAAAGTGGTCTGTAAAGAAGTGGCTCACGCCCTGAATTTAGAGTTCACCGATCCAGTTTCATTACTGGCATAA
Upstream 100 bases:
>100_bases GATACTATACTAGATATCCCTGAATTAATCACGTTCAGGTCACGATAAAATAACAATTATGCCCATTAAAAGTGGGTTTT CAGGCAATTGAGGCTCAAAG
Downstream 100 bases:
>100_bases GCGTTTAATTAGCTTAAGCTTTCGGTGGAACATTGCGTTTGCTTTACCTAGCAAATAATCCAAATCGGCCTCGACTCAGT TGAGGCCGATTTTTTATTGG
Product: alanine dehydrogenase
Products: NA
Alternate protein names: 40 kDa antigen; TB43 [H]
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MIIGVPKEIKNHEYRVGMVPSSVRELAIKGHEVFVETNAGTGIGFSDQDYIDAGAKILATAAEVFAKAQMIVKVKEPQAV ERAMLRHDQILFTYLHLAPDLPQTEDLIKSGAVCIAYETVTDDRGGLPLLAPMSEVAGRMSIQAGAMALEKSSGGRGMLL GGVPGVEPAKVVIIGGGMVGTNAAQMAVGLGADVVVLDRSIDALRRLNVQFGSAVKAIYSTADAIERHVIEADLVIGGVL IPGAAAPKLVTRSMISRMKPGSAIVDVAIDQGGCVETSHATTHQDPTYIVDDVVHYCVANMPGAVARTSTFALNNATLPY ILKLANLGYKEALLHDKHLLNGLNVMHGKVVCKEVAHALNLEFTDPVSLLA
Sequences:
>Translated_371_residues MIIGVPKEIKNHEYRVGMVPSSVRELAIKGHEVFVETNAGTGIGFSDQDYIDAGAKILATAAEVFAKAQMIVKVKEPQAV ERAMLRHDQILFTYLHLAPDLPQTEDLIKSGAVCIAYETVTDDRGGLPLLAPMSEVAGRMSIQAGAMALEKSSGGRGMLL GGVPGVEPAKVVIIGGGMVGTNAAQMAVGLGADVVVLDRSIDALRRLNVQFGSAVKAIYSTADAIERHVIEADLVIGGVL IPGAAAPKLVTRSMISRMKPGSAIVDVAIDQGGCVETSHATTHQDPTYIVDDVVHYCVANMPGAVARTSTFALNNATLPY ILKLANLGYKEALLHDKHLLNGLNVMHGKVVCKEVAHALNLEFTDPVSLLA >Mature_371_residues MIIGVPKEIKNHEYRVGMVPSSVRELAIKGHEVFVETNAGTGIGFSDQDYIDAGAKILATAAEVFAKAQMIVKVKEPQAV ERAMLRHDQILFTYLHLAPDLPQTEDLIKSGAVCIAYETVTDDRGGLPLLAPMSEVAGRMSIQAGAMALEKSSGGRGMLL GGVPGVEPAKVVIIGGGMVGTNAAQMAVGLGADVVVLDRSIDALRRLNVQFGSAVKAIYSTADAIERHVIEADLVIGGVL IPGAAAPKLVTRSMISRMKPGSAIVDVAIDQGGCVETSHATTHQDPTYIVDDVVHYCVANMPGAVARTSTFALNNATLPY ILKLANLGYKEALLHDKHLLNGLNVMHGKVVCKEVAHALNLEFTDPVSLLA
Specific function: May play a role in cell wall synthesis as L-alanine is an important constituent of the peptidoglycan layer [H]
COG id: COG0686
COG function: function code E; Alanine dehydrogenase
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AlaDH/PNT family [H]
Homologues:
Organism=Homo sapiens, GI122939155, Length=346, Percent_Identity=30.635838150289, Blast_Score=116, Evalue=3e-26, Organism=Homo sapiens, GI122939153, Length=346, Percent_Identity=30.635838150289, Blast_Score=116, Evalue=3e-26, Organism=Escherichia coli, GI1787887, Length=391, Percent_Identity=27.1099744245524, Blast_Score=107, Evalue=1e-24, Organism=Caenorhabditis elegans, GI17550456, Length=344, Percent_Identity=29.0697674418605, Blast_Score=118, Evalue=4e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007698 - InterPro: IPR008142 - InterPro: IPR008143 - InterPro: IPR007886 - InterPro: IPR008141 [H]
Pfam domain/function: PF01262 AlaDh_PNT_C; PF05222 AlaDh_PNT_N [H]
EC number: =1.4.1.1 [H]
Molecular weight: Translated: 39172; Mature: 39172
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: PS00837 ALADH_PNT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIGVPKEIKNHEYRVGMVPSSVRELAIKGHEVFVETNAGTGIGFSDQDYIDAGAKILAT CEECCCHHHCCCCEEEECCCHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHH AAEVFAKAQMIVKVKEPQAVERAMLRHDQILFTYLHLAPDLPQTEDLIKSGAVCIAYETV HHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCEEEEEEEE TDDRGGLPLLAPMSEVAGRMSIQAGAMALEKSSGGRGMLLGGVPGVEPAKVVIIGGGMVG CCCCCCCCEECCHHHHHHHHEEHHHHEEEECCCCCCEEEECCCCCCCCCEEEEEECCEEC TNAAQMAVGLGADVVVLDRSIDALRRLNVQFGSAVKAIYSTADAIERHVIEADLVIGGVL CCHHHHHHCCCCCEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEE IPGAAAPKLVTRSMISRMKPGSAIVDVAIDQGGCVETSHATTHQDPTYIVDDVVHYCVAN CCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHHC MPGAVARTSTFALNNATLPYILKLANLGYKEALLHDKHLLNGLNVMHGKVVCKEVAHALN CCCCHHHCEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC LEFTDPVSLLA CCCCCCHHHCC >Mature Secondary Structure MIIGVPKEIKNHEYRVGMVPSSVRELAIKGHEVFVETNAGTGIGFSDQDYIDAGAKILAT CEECCCHHHCCCCEEEECCCHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHH AAEVFAKAQMIVKVKEPQAVERAMLRHDQILFTYLHLAPDLPQTEDLIKSGAVCIAYETV HHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCEEEEEEEE TDDRGGLPLLAPMSEVAGRMSIQAGAMALEKSSGGRGMLLGGVPGVEPAKVVIIGGGMVG CCCCCCCCEECCHHHHHHHHEEHHHHEEEECCCCCCEEEECCCCCCCCCEEEEEECCEEC TNAAQMAVGLGADVVVLDRSIDALRRLNVQFGSAVKAIYSTADAIERHVIEADLVIGGVL CCHHHHHHCCCCCEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEE IPGAAAPKLVTRSMISRMKPGSAIVDVAIDQGGCVETSHATTHQDPTYIVDDVVHYCVAN CCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHHC MPGAVARTSTFALNNATLPYILKLANLGYKEALLHDKHLLNGLNVMHGKVVCKEVAHALN CCCCHHHCEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC LEFTDPVSLLA CCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1587598; 9634230; 12218036; 7822223 [H]