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The map label for this gene is ssaU [H]

Identifier: 160875393

GI number: 160875393

Start: 2702876

End: 2703925

Strand: Direct

Name: ssaU [H]

Synonym: Sbal195_2281

Alternate gene names: 160875393

Gene position: 2702876-2703925 (Clockwise)

Preceding gene: 160875392

Following gene: 160875396

Centisome position: 50.55

GC content: 44.67

Gene sequence:

>1050_bases
ATGGCCGAGAAAACAGAAAAACCCACAGAAAAACGTTTACGAGAAGCGAGAAATCGCGGTCAGGTCATTAAAAGTGCTGA
AATTGTCACAGGGTTACAGATGGCGATCATTCTCGGATACTTTCTCTACGAAGGGCCAGCACTCGTCCAAGCCATTATGG
CGTTAATCGACTTAACCATTCACGCCATCAATCTTCCCCTTGAAACTGCGGCCGAGCAAATCGTTGGTACCTTCGCCGTG
CTGGCATTACGTTTTTTAGGTGGGCTGACATTAGTACTCGTGTTTACCATAGTGGTGGGGAACTTAGTCCAAACAGGTCC
CGTTTGGGCGGCTGAGTCTATAATGCCGAGCATGGATAAACTCAATGTCATGAATAATGCTAAGCAACTTATTTCACTGA
AAAGTCTGTTTGAGCTCGCTAAAAATCTCGTTAAAGTCACAGTGCTGAGTTTAGTGTTTTACTATCTGCTCCATCGTTAC
GTTAACGCCTTTCAATACTTGCCTTTATGCGGAGAAGCCTGCGGTATCAGTGTGATTTCGACCATGATTACTTGGCTCTG
GGGCAGCTTTTTAGGATGTTACTTAATATTTGGGATCGCTGATTATGCATTTCAACGCTATAGCCTAATGAAAGAACTCA
AAATGTCCAAAGATGATACCAAACAAGAATACAAAGATTCTGAAGGAAACCCCGAAATGAAACAAAAACGCCGCGAAACC
CAGCGAGAAGTGGCGTCTGGTAGTCTTGCCAGTAACGTTCGCAAAGCCACAGTGGTTGTGCGTAATCCAACCCACATTGC
CGTGTGTTTGTATTATAGTGAAGGTGAGACACCGTTGCCTAAAGTGCTTGAAAAAGCCGAAGATCACATGGCCTTACACA
TAGTGGCATTAGCTGAGAAAGCTGGGGTGCCAATTGTCGAGAACATTCCATTGGCCCGCGCCTTATTTAAACACGTTGAG
GCAGGAGACGTGATTCCAGAGAGCCTATTTGAACCCGTAGCAGAGCTTTTACGACTAGTGATGACAATATCCTATGATAA
TATGGAGTAA

Upstream 100 bases:

>100_bases
TTTGTCCCATTACCTGCAGACCATTTCTGGGGTAGAGCAGCACGTAGATATTTTGTTTGGACTCTTAGCAGGGCACTAGT
GCCCCTTGTGGATATGACCT

Downstream 100 bases:

>100_bases
CAGCTTGGGGTGGCATGATTCCACCCTTACATCCCTACAAACGTCCACCTAGAAGCTGATGATATAATGAGCGTTTCAAA
AAGGCCGCGGCAAGGCTAGA

Product: secretion system apparatus protein SsaU

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 348

Protein sequence:

>349_residues
MAEKTEKPTEKRLREARNRGQVIKSAEIVTGLQMAIILGYFLYEGPALVQAIMALIDLTIHAINLPLETAAEQIVGTFAV
LALRFLGGLTLVLVFTIVVGNLVQTGPVWAAESIMPSMDKLNVMNNAKQLISLKSLFELAKNLVKVTVLSLVFYYLLHRY
VNAFQYLPLCGEACGISVISTMITWLWGSFLGCYLIFGIADYAFQRYSLMKELKMSKDDTKQEYKDSEGNPEMKQKRRET
QREVASGSLASNVRKATVVVRNPTHIAVCLYYSEGETPLPKVLEKAEDHMALHIVALAEKAGVPIVENIPLARALFKHVE
AGDVIPESLFEPVAELLRLVMTISYDNME

Sequences:

>Translated_349_residues
MAEKTEKPTEKRLREARNRGQVIKSAEIVTGLQMAIILGYFLYEGPALVQAIMALIDLTIHAINLPLETAAEQIVGTFAV
LALRFLGGLTLVLVFTIVVGNLVQTGPVWAAESIMPSMDKLNVMNNAKQLISLKSLFELAKNLVKVTVLSLVFYYLLHRY
VNAFQYLPLCGEACGISVISTMITWLWGSFLGCYLIFGIADYAFQRYSLMKELKMSKDDTKQEYKDSEGNPEMKQKRRET
QREVASGSLASNVRKATVVVRNPTHIAVCLYYSEGETPLPKVLEKAEDHMALHIVALAEKAGVPIVENIPLARALFKHVE
AGDVIPESLFEPVAELLRLVMTISYDNME
>Mature_348_residues
AEKTEKPTEKRLREARNRGQVIKSAEIVTGLQMAIILGYFLYEGPALVQAIMALIDLTIHAINLPLETAAEQIVGTFAVL
ALRFLGGLTLVLVFTIVVGNLVQTGPVWAAESIMPSMDKLNVMNNAKQLISLKSLFELAKNLVKVTVLSLVFYYLLHRYV
NAFQYLPLCGEACGISVISTMITWLWGSFLGCYLIFGIADYAFQRYSLMKELKMSKDDTKQEYKDSEGNPEMKQKRRETQ
REVASGSLASNVRKATVVVRNPTHIAVCLYYSEGETPLPKVLEKAEDHMALHIVALAEKAGVPIVENIPLARALFKHVEA
GDVIPESLFEPVAELLRLVMTISYDNME

Specific function: Part of a type III secretion system [H]

COG id: COG4792

COG function: function code U; Type III secretory pathway, component EscU

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the type III secretion exporter family [H]

Homologues:

Organism=Escherichia coli, GI1788188, Length=351, Percent_Identity=32.4786324786325, Blast_Score=147, Evalue=9e-37,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006135
- InterPro:   IPR006307 [H]

Pfam domain/function: PF01312 Bac_export_2 [H]

EC number: NA

Molecular weight: Translated: 38871; Mature: 38740

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AEKTEKPTEKRLREARNRGQVIKSAEIVTGLQMAIILGYFLYEGPALVQAIMALIDLTI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
HAINLPLETAAEQIVGTFAVLALRFLGGLTLVLVFTIVVGNLVQTGPVWAAESIMPSMDK
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHH
LNVMNNAKQLISLKSLFELAKNLVKVTVLSLVFYYLLHRYVNAFQYLPLCGEACGISVIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TMITWLWGSFLGCYLIFGIADYAFQRYSLMKELKMSKDDTKQEYKDSEGNPEMKQKRRET
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHH
QREVASGSLASNVRKATVVVRNPTHIAVCLYYSEGETPLPKVLEKAEDHMALHIVALAEK
HHHHHCCHHHHHHHHHEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
AGVPIVENIPLARALFKHVEAGDVIPESLFEPVAELLRLVMTISYDNME
CCCCCHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9140973; 11677609 [H]