| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875379
Identifier: 160875379
GI number: 160875379
Start: 2688222
End: 2688902
Strand: Direct
Name: 160875379
Synonym: Sbal195_2267
Alternate gene names: NA
Gene position: 2688222-2688902 (Clockwise)
Preceding gene: 160875378
Following gene: 160875380
Centisome position: 50.27
GC content: 47.28
Gene sequence:
>681_bases ATGGAGGACTTGACCCCTAATCAACCACTAATACGGGTCGAAGCTACTGGCCAAAACAAGTTAAATCGAGTTGTATCACC AGCATTATTGGCCTTCAATCGTCTCGTTTGGCAACCTGTTGCGACTATGCATCCGAGCTGGTGGCAAGAATTACAATTAA CTCTTTGGCAGGCACAGTATCAAGCGGGTACCCGATTAGCGCAGCGAATCGAAGCAGTTGTGGTTTCCCGTTATGGTTTG GCAGGTCAAGATTTACCAAAGGAATTTAATGAGCTCGAGGCTAACCTGTTAGCCTGCCGGCATAAACTCAGTGCCATAGT GACGGCGTTGGGGCTCTTTCTCCTCAACCGCCCTGATTATGTGTCATTACGTGAATATCGTGATGCCTTGCATCAAGAGT TAAGCCAAGCACAAATTCAACAAATTTGGAATTTGTGGCCCCAGAGGCCCCAACTTACAACATATGTCTATCGAGACGAA GTGACTGCGACAGAGTTAGTTGGCGTAGCCCAGACCTGCGCTATTAACCTGATAGGACAATTATGGGGAAACAAACCGTT CTGGCGGGCATTAGCCTTGACCTTACCTGTGCAAGCAACATTGCCATGTAAAGCGGACTCCCTAGCACCTATTTCCTTAG ATATTCCTCGCTGGTTAATGAGATTGGAGCGACTACTATGA
Upstream 100 bases:
>100_bases CATTAGTGATCAGCTTATCTGGAATAATGCTACTCAGCATAGGCGGTATGTGGTGGATGAGACGTAAGTAACCATAACAA TTGTTGTTTCTGGAGGAACT
Downstream 100 bases:
>100_bases ACCCATTTTTAATTGAGGTACGCCCTTGCGAGCTCCGTCGTGAAGGCCATCATTTGATCAGCGCCACAGCGTTACATCGG GCGAGTGAGTTAGCGGATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MEDLTPNQPLIRVEATGQNKLNRVVSPALLAFNRLVWQPVATMHPSWWQELQLTLWQAQYQAGTRLAQRIEAVVVSRYGL AGQDLPKEFNELEANLLACRHKLSAIVTALGLFLLNRPDYVSLREYRDALHQELSQAQIQQIWNLWPQRPQLTTYVYRDE VTATELVGVAQTCAINLIGQLWGNKPFWRALALTLPVQATLPCKADSLAPISLDIPRWLMRLERLL
Sequences:
>Translated_226_residues MEDLTPNQPLIRVEATGQNKLNRVVSPALLAFNRLVWQPVATMHPSWWQELQLTLWQAQYQAGTRLAQRIEAVVVSRYGL AGQDLPKEFNELEANLLACRHKLSAIVTALGLFLLNRPDYVSLREYRDALHQELSQAQIQQIWNLWPQRPQLTTYVYRDE VTATELVGVAQTCAINLIGQLWGNKPFWRALALTLPVQATLPCKADSLAPISLDIPRWLMRLERLL >Mature_226_residues MEDLTPNQPLIRVEATGQNKLNRVVSPALLAFNRLVWQPVATMHPSWWQELQLTLWQAQYQAGTRLAQRIEAVVVSRYGL AGQDLPKEFNELEANLLACRHKLSAIVTALGLFLLNRPDYVSLREYRDALHQELSQAQIQQIWNLWPQRPQLTTYVYRDE VTATELVGVAQTCAINLIGQLWGNKPFWRALALTLPVQATLPCKADSLAPISLDIPRWLMRLERLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25842; Mature: 25842
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDLTPNQPLIRVEATGQNKLNRVVSPALLAFNRLVWQPVATMHPSWWQELQLTLWQAQY CCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH QAGTRLAQRIEAVVVSRYGLAGQDLPKEFNELEANLLACRHKLSAIVTALGLFLLNRPDY HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VSLREYRDALHQELSQAQIQQIWNLWPQRPQLTTYVYRDEVTATELVGVAQTCAINLIGQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHH LWGNKPFWRALALTLPVQATLPCKADSLAPISLDIPRWLMRLERLL HHCCCHHHHHHHHHCCCCEECCCCCCCCCCCEECHHHHHHHHHHHC >Mature Secondary Structure MEDLTPNQPLIRVEATGQNKLNRVVSPALLAFNRLVWQPVATMHPSWWQELQLTLWQAQY CCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH QAGTRLAQRIEAVVVSRYGLAGQDLPKEFNELEANLLACRHKLSAIVTALGLFLLNRPDY HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VSLREYRDALHQELSQAQIQQIWNLWPQRPQLTTYVYRDEVTATELVGVAQTCAINLIGQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHH LWGNKPFWRALALTLPVQATLPCKADSLAPISLDIPRWLMRLERLL HHCCCHHHHHHHHHCCCCEECCCCCCCCCCCEECHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA