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The map label for this gene is 160875371

Identifier: 160875371

GI number: 160875371

Start: 2683275

End: 2683754

Strand: Direct

Name: 160875371

Synonym: Sbal195_2259

Alternate gene names: NA

Gene position: 2683275-2683754 (Clockwise)

Preceding gene: 160875370

Following gene: 160875372

Centisome position: 50.18

GC content: 45.21

Gene sequence:

>480_bases
ATGATAAATAATGAAATTGAATTAGATTTTGAAAAGCTTGAAGCTGCCTGCCAGTTAGCTTTAGTGAATCAACAGACCTT
AGCTGAACAAGTGGGTTTAACGAGCCAAGATCTCGAGCTAATTTACCAATCTGGCACGAGTAAATATCAGATGGGCTTGC
CCGCAGAAGCGATTGTCGATTTTACCTATTTGGTCATGCACCAACCTTGGGATAGACGCTTTCATCTTGGACTGGGGTCT
TGCCTACATTGGCTAGGTGAATACCAGCATGCCTTGACCTTCTATGGTTATGCACTCTTGATGGATGCCTGCTCTCCCGA
AGCGAGTTTCCGTATTGCGCAGTGCTTTCTGAGCTTAAATGATGACGCCGCGGCAATCGAAGCGTTACAGATGGCCATCT
CACAGAGCTACAGTAAGCCAGAGCACCATTTTGTGGGGGATCAAGCACAGCAATTGCTTAGTGCTCTTAATAATCAATAG

Upstream 100 bases:

>100_bases
CGAATTAGCATCATCTTTTTTCATATTAATTAATGGATTTTCGCCTTGTCGAGTGGAACGCCATCAATGCATTCAAATTG
AACCACTAAAGGTACCCAAA

Downstream 100 bases:

>100_bases
ATAATAGGATTTGCAATCATCATTTATATTATTGAAAGAGGTTTATTATGAATGAGTTAACACATGTTTCTTTATCATCC
CCGACTTTAAGCGGTTTAGA

Product: type III secretion low calcium response chaperone LcrH/SycD

Products: NA

Alternate protein names: TPR Repeat-Containing Protein; Type III Secretion Chaperone SycD/LcrH; Type III Secretion System Chaperone Protein B; Type III Secretion Low Calcium Response Chaperone LcrH/SycD; Low Calcium Response Protein H; Pathogenicity Island Protein

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MINNEIELDFEKLEAACQLALVNQQTLAEQVGLTSQDLELIYQSGTSKYQMGLPAEAIVDFTYLVMHQPWDRRFHLGLGS
CLHWLGEYQHALTFYGYALLMDACSPEASFRIAQCFLSLNDDAAAIEALQMAISQSYSKPEHHFVGDQAQQLLSALNNQ

Sequences:

>Translated_159_residues
MINNEIELDFEKLEAACQLALVNQQTLAEQVGLTSQDLELIYQSGTSKYQMGLPAEAIVDFTYLVMHQPWDRRFHLGLGS
CLHWLGEYQHALTFYGYALLMDACSPEASFRIAQCFLSLNDDAAAIEALQMAISQSYSKPEHHFVGDQAQQLLSALNNQ
>Mature_159_residues
MINNEIELDFEKLEAACQLALVNQQTLAEQVGLTSQDLELIYQSGTSKYQMGLPAEAIVDFTYLVMHQPWDRRFHLGLGS
CLHWLGEYQHALTFYGYALLMDACSPEASFRIAQCFLSLNDDAAAIEALQMAISQSYSKPEHHFVGDQAQQLLSALNNQ

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17861; Mature: 17861

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINNEIELDFEKLEAACQLALVNQQTLAEQVGLTSQDLELIYQSGTSKYQMGLPAEAIVD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEECCCCHHHHHH
FTYLVMHQPWDRRFHLGLGSCLHWLGEYQHALTFYGYALLMDACSPEASFRIAQCFLSLN
HHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
DDAAAIEALQMAISQSYSKPEHHFVGDQAQQLLSALNNQ
CCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MINNEIELDFEKLEAACQLALVNQQTLAEQVGLTSQDLELIYQSGTSKYQMGLPAEAIVD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEECCCCHHHHHH
FTYLVMHQPWDRRFHLGLGSCLHWLGEYQHALTFYGYALLMDACSPEASFRIAQCFLSLN
HHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
DDAAAIEALQMAISQSYSKPEHHFVGDQAQQLLSALNNQ
CCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA