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The map label for this gene is 160875362

Identifier: 160875362

GI number: 160875362

Start: 2675061

End: 2676266

Strand: Direct

Name: 160875362

Synonym: Sbal195_2250

Alternate gene names: NA

Gene position: 2675061-2676266 (Clockwise)

Preceding gene: 160875361

Following gene: 160875363

Centisome position: 50.03

GC content: 45.27

Gene sequence:

>1206_bases
ATGTCTTCAGGATACAAGCTCTTATGGTTAAACGGTCCATTGCAAGGACGAGAGCTATCTTTGCCTCTTGGTAACTTAAG
CATCGGACCCGATGGTGATGTGTTAGCCACACTTGAACACGTAGAACAAGTGGATTTATTGATCGATGAAACGGGGGTTC
GGCTGCAGTCTTGGGTACCGACTTGGATAGCTGGACAGCCTGTCACCGAAGCCAACATGTTGCCATTGGGGCAAGCAATT
GAACTCGCAGGTGTGGGTATCCTCTTAGGTCACAGCAGCGATGAATTAAAGCAACAGGCAATGCCATCACATTGTCAAAC
AAAGGCAAAGAAGTCTTGGTGGTTACTGGCGACAGTTTCAATGCTCTCTATGGTGCTATTAACGACAGTGTTATTAGCGC
CTGCGAAGATGCCTATCGCCGAGTTGACACAAGCACAGTGGTTATCGCAGCAGTTGCAGACCGATGGTTTAAACGGAGTT
CAAGCTCATTGGTCAAAGGATGGCGTGGTGACGCTGAGCGGCTTTTGCCAAGATTCACAACGTATGGCGCGGTTTCTTGG
TGACATCAAAGGACAAGGTATTTTATTTATAGAGCAGACCACTTGCGGCGATCAGTTGATACGTAATGTCAAAGATGTCT
TAGTCCAAAATGGGTTTGCCAATGCCCTTGTAACCTTAGGGACTGAGCCTGGTAATGTCATCATCTCGGGCGCGATTCAA
TCAGGGGAGCCCTGGGATAAAGCAGTGTCTAGCTTGAATAACTTGCCCGGACTCGTTAATTGGCAAGTTAGCAATCAGGT
TGACAGTCAACTCAAACCGCTCATCTGCGCGTTGCGAAACAAAAATTTACTCGTCGGTCTCATGATAGAAAGGATCAATG
ATGCCATCGTCATGACGGGTAAAGTCAGTGAACAACAACAGCAACAGATCATGGCTGTCGCGCAAGGATTAGAACCAACA
CATGCCAGTGGATTGAAATTAGTATTTCAAAATATTCCAGTACGAGACGAACTTAATCATTTATTAAATGCTTCTGTGGT
GACCTATGGTGGTAATGCACAGTCTCCATTCATTGAGTTATCGAGTGGTGTTCGGTTATCAACGGGTAGCAAATTAGATA
ATGGTTATGTCGTGGAGTATATGAACATTCATGGATTAGATCTCAGTAGAGCCGGTGAGTTAATTCATGTACCACTTATT
TTTTAG

Upstream 100 bases:

>100_bases
CCATTACTGGGCGGTTTGTTTAGAAGCACAGATCACCACACTCAAAGCGTGATGCGTCTGTTCCTGATCAAAGCGGAACC
CGTTAACCAAGGAGATTAAT

Downstream 100 bases:

>100_bases
GAGGCATTATGTCAAGAATTACACAGCTTGAGGATGATATCAAATTACATAATTATAAACGGGAGGCTTACCATAATAGA
CTAGCTAAAATGCGCAGTAA

Product: YscD/HrpQ family type III secretion apparatus protein

Products: NA

Alternate protein names: Type III Secretion Apparatus Protein; Type III Secretion Apparatus Protein YscD/HrpQ Family; YscD/HrpQ Family Type III Secretion Apparatus Protein; Type III Secretion Apparatus; Type III Export Protein PscD; Pathogenicity Island Protein

Number of amino acids: Translated: 401; Mature: 400

Protein sequence:

>401_residues
MSSGYKLLWLNGPLQGRELSLPLGNLSIGPDGDVLATLEHVEQVDLLIDETGVRLQSWVPTWIAGQPVTEANMLPLGQAI
ELAGVGILLGHSSDELKQQAMPSHCQTKAKKSWWLLATVSMLSMVLLTTVLLAPAKMPIAELTQAQWLSQQLQTDGLNGV
QAHWSKDGVVTLSGFCQDSQRMARFLGDIKGQGILFIEQTTCGDQLIRNVKDVLVQNGFANALVTLGTEPGNVIISGAIQ
SGEPWDKAVSSLNNLPGLVNWQVSNQVDSQLKPLICALRNKNLLVGLMIERINDAIVMTGKVSEQQQQQIMAVAQGLEPT
HASGLKLVFQNIPVRDELNHLLNASVVTYGGNAQSPFIELSSGVRLSTGSKLDNGYVVEYMNIHGLDLSRAGELIHVPLI
F

Sequences:

>Translated_401_residues
MSSGYKLLWLNGPLQGRELSLPLGNLSIGPDGDVLATLEHVEQVDLLIDETGVRLQSWVPTWIAGQPVTEANMLPLGQAI
ELAGVGILLGHSSDELKQQAMPSHCQTKAKKSWWLLATVSMLSMVLLTTVLLAPAKMPIAELTQAQWLSQQLQTDGLNGV
QAHWSKDGVVTLSGFCQDSQRMARFLGDIKGQGILFIEQTTCGDQLIRNVKDVLVQNGFANALVTLGTEPGNVIISGAIQ
SGEPWDKAVSSLNNLPGLVNWQVSNQVDSQLKPLICALRNKNLLVGLMIERINDAIVMTGKVSEQQQQQIMAVAQGLEPT
HASGLKLVFQNIPVRDELNHLLNASVVTYGGNAQSPFIELSSGVRLSTGSKLDNGYVVEYMNIHGLDLSRAGELIHVPLI
F
>Mature_400_residues
SSGYKLLWLNGPLQGRELSLPLGNLSIGPDGDVLATLEHVEQVDLLIDETGVRLQSWVPTWIAGQPVTEANMLPLGQAIE
LAGVGILLGHSSDELKQQAMPSHCQTKAKKSWWLLATVSMLSMVLLTTVLLAPAKMPIAELTQAQWLSQQLQTDGLNGVQ
AHWSKDGVVTLSGFCQDSQRMARFLGDIKGQGILFIEQTTCGDQLIRNVKDVLVQNGFANALVTLGTEPGNVIISGAIQS
GEPWDKAVSSLNNLPGLVNWQVSNQVDSQLKPLICALRNKNLLVGLMIERINDAIVMTGKVSEQQQQQIMAVAQGLEPTH
ASGLKLVFQNIPVRDELNHLLNASVVTYGGNAQSPFIELSSGVRLSTGSKLDNGYVVEYMNIHGLDLSRAGELIHVPLIF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43385; Mature: 43253

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSGYKLLWLNGPLQGRELSLPLGNLSIGPDGDVLATLEHVEQVDLLIDETGVRLQSWVP
CCCCCEEEEECCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEHHCCC
TWIAGQPVTEANMLPLGQAIELAGVGILLGHSSDELKQQAMPSHCQTKAKKSWWLLATVS
HHCCCCCCCCCCCCCCCCHHHHCCEEEEEECCHHHHHHHHCCHHHHHHHCCCCHHHHHHH
MLSMVLLTTVLLAPAKMPIAELTQAQWLSQQLQTDGLNGVQAHWSKDGVVTLSGFCQDSQ
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHH
RMARFLGDIKGQGILFIEQTTCGDQLIRNVKDVLVQNGFANALVTLGTEPGNVIISGAIQ
HHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEECCC
SGEPWDKAVSSLNNLPGLVNWQVSNQVDSQLKPLICALRNKNLLVGLMIERINDAIVMTG
CCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEHHHHHCCCEEEEEC
KVSEQQQQQIMAVAQGLEPTHASGLKLVFQNIPVRDELNHLLNASVVTYGGNAQSPFIEL
CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHHHHHHCCEEEEECCCCCCCEEEE
SSGVRLSTGSKLDNGYVVEYMNIHGLDLSRAGELIHVPLIF
CCCEEEECCCCCCCCEEEEEEEECCCCHHCCCCEEEEEEEC
>Mature Secondary Structure 
SSGYKLLWLNGPLQGRELSLPLGNLSIGPDGDVLATLEHVEQVDLLIDETGVRLQSWVP
CCCCEEEEECCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEHHCCC
TWIAGQPVTEANMLPLGQAIELAGVGILLGHSSDELKQQAMPSHCQTKAKKSWWLLATVS
HHCCCCCCCCCCCCCCCCHHHHCCEEEEEECCHHHHHHHHCCHHHHHHHCCCCHHHHHHH
MLSMVLLTTVLLAPAKMPIAELTQAQWLSQQLQTDGLNGVQAHWSKDGVVTLSGFCQDSQ
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHH
RMARFLGDIKGQGILFIEQTTCGDQLIRNVKDVLVQNGFANALVTLGTEPGNVIISGAIQ
HHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEECCC
SGEPWDKAVSSLNNLPGLVNWQVSNQVDSQLKPLICALRNKNLLVGLMIERINDAIVMTG
CCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEHHHHHCCCEEEEEC
KVSEQQQQQIMAVAQGLEPTHASGLKLVFQNIPVRDELNHLLNASVVTYGGNAQSPFIEL
CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHHHHHHCCEEEEECCCCCCCEEEE
SSGVRLSTGSKLDNGYVVEYMNIHGLDLSRAGELIHVPLIF
CCCEEEECCCCCCCCEEEEEEEECCCCHHCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA