| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875352
Identifier: 160875352
GI number: 160875352
Start: 2661984
End: 2663069
Strand: Reverse
Name: 160875352
Synonym: Sbal195_2240
Alternate gene names: NA
Gene position: 2663069-2661984 (Counterclockwise)
Preceding gene: 160875353
Following gene: 160875349
Centisome position: 49.8
GC content: 49.82
Gene sequence:
>1086_bases ATGAGCCAGTTTATCGATATTTTACGCCAACATCTGGCGGATTTTCGGCGGCGTTATGCCCATCAAATCACCCCAGAAAT ACATGCTGCTATCCATGCCATGCTCAGCTGTCGTTGCAACACGGCGAGGGTGAGTTGCTGGGATTGTCAAACCTGCGAGC AACAGCTTGAGTTTCCGCTCTCTTGCGGTCATCGCAGTTGCCCACAGTGCCAACATGGCACAACATGTGACTGGCTTGAT AAACAACAAGCCAAGTTATTACCGGTGAATTATTTTATGGTGACCTTTACCTTGCCGTTTGAATTAAGAGCCATAGCAAA GTCGCAACCCGAGCCGTTCTATCACGCCATGTTTACCGTGGCAGCGAGTGTACTCAAAGACTTTGCCGCACGCTCCCCTA AGCTCAGTGGTGACATCGGCTTCACCGGCGTACTGCATACTCACAGTCGGCGCAGAGACTACCATCCACATCTGCACTTC ATTATCCCAGCAGGGAGCTACCACTCAGGCAAGCGGCAATGGCGCAAGTGTCAAACCCATTACTTATTTAACGCCTTTAA TCTTGCCAAGGTGTGGCGAGCACGTTTACTGGCTTATCTGAGTGACACGTTTCAACTCACCCTACCACATCAATCCCACT CGAAATGGGTGGTCGATTGTCAGTTCGTGGGTAAAGGCGAACCTGCACTGCAATATCTGTCGCGCTACCTTTATCGGGGC GTATTACCCGACAGCAGTATTTGTCGTCATGTCGATAATCAGGTGAGTTTTACATATCAAGACAGTCAGACCCGCTGCCA ACAAGTACGCAGCTTGCCCGCCGTCGAATTTCTGTGGTTGATATTACAACATGTGTTACCCAAAGGATTACGGCGAGTAC GAGACTATGGCTTACTGCGAGGCAATGCCAAAAAGCTACGGCAACAAATCCAACTGATGTTGGCTGTCGCAGGTGCAGTG TTCCCCATGTTACCTGAGGTCAAACGTACCTTAGCCGTGCGCTATTGCCCTTGCTGCCATCAAGCTATGCATTTTATGGG TGTTCATATGCATCATCGACCGACAGGCGCTAATATCACCGCTTAA
Upstream 100 bases:
>100_bases CCGCCCGTTACACGCGGCTCACTGATATCACCCGTAAAAATACCTGTGAGGCGATTAACCAACTGACCAACGGCTTAGCT TTGAGGTGGGAGTGTGGGTT
Downstream 100 bases:
>100_bases GGCGAGAAGTATAAGGATAACGGGTTAACCAAACAGAATGAGGACTCGATAACAGCTTGATGAACAAGTGATAAAAATAT TAGCTCGTTCGCTAAGGGCG
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MSQFIDILRQHLADFRRRYAHQITPEIHAAIHAMLSCRCNTARVSCWDCQTCEQQLEFPLSCGHRSCPQCQHGTTCDWLD KQQAKLLPVNYFMVTFTLPFELRAIAKSQPEPFYHAMFTVAASVLKDFAARSPKLSGDIGFTGVLHTHSRRRDYHPHLHF IIPAGSYHSGKRQWRKCQTHYLFNAFNLAKVWRARLLAYLSDTFQLTLPHQSHSKWVVDCQFVGKGEPALQYLSRYLYRG VLPDSSICRHVDNQVSFTYQDSQTRCQQVRSLPAVEFLWLILQHVLPKGLRRVRDYGLLRGNAKKLRQQIQLMLAVAGAV FPMLPEVKRTLAVRYCPCCHQAMHFMGVHMHHRPTGANITA
Sequences:
>Translated_361_residues MSQFIDILRQHLADFRRRYAHQITPEIHAAIHAMLSCRCNTARVSCWDCQTCEQQLEFPLSCGHRSCPQCQHGTTCDWLD KQQAKLLPVNYFMVTFTLPFELRAIAKSQPEPFYHAMFTVAASVLKDFAARSPKLSGDIGFTGVLHTHSRRRDYHPHLHF IIPAGSYHSGKRQWRKCQTHYLFNAFNLAKVWRARLLAYLSDTFQLTLPHQSHSKWVVDCQFVGKGEPALQYLSRYLYRG VLPDSSICRHVDNQVSFTYQDSQTRCQQVRSLPAVEFLWLILQHVLPKGLRRVRDYGLLRGNAKKLRQQIQLMLAVAGAV FPMLPEVKRTLAVRYCPCCHQAMHFMGVHMHHRPTGANITA >Mature_360_residues SQFIDILRQHLADFRRRYAHQITPEIHAAIHAMLSCRCNTARVSCWDCQTCEQQLEFPLSCGHRSCPQCQHGTTCDWLDK QQAKLLPVNYFMVTFTLPFELRAIAKSQPEPFYHAMFTVAASVLKDFAARSPKLSGDIGFTGVLHTHSRRRDYHPHLHFI IPAGSYHSGKRQWRKCQTHYLFNAFNLAKVWRARLLAYLSDTFQLTLPHQSHSKWVVDCQFVGKGEPALQYLSRYLYRGV LPDSSICRHVDNQVSFTYQDSQTRCQQVRSLPAVEFLWLILQHVLPKGLRRVRDYGLLRGNAKKLRQQIQLMLAVAGAVF PMLPEVKRTLAVRYCPCCHQAMHFMGVHMHHRPTGANITA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 32 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007069 [H]
Pfam domain/function: PF04986 Transposase_32 [H]
EC number: NA
Molecular weight: Translated: 41685; Mature: 41554
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQFIDILRQHLADFRRRYAHQITPEIHAAIHAMLSCRCNTARVSCWDCQTCEQQLEFPL CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHCCCCC SCGHRSCPQCQHGTTCDWLDKQQAKLLPVNYFMVTFTLPFELRAIAKSQPEPFYHAMFTV CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCHHHHHHHCCCCCHHHHHHHHH AASVLKDFAARSPKLSGDIGFTGVLHTHSRRRDYHPHLHFIIPAGSYHSGKRQWRKCQTH HHHHHHHHHHCCCCCCCCCCCEEEECCCHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHH YLFNAFNLAKVWRARLLAYLSDTFQLTLPHQSHSKWVVDCQFVGKGEPALQYLSRYLYRG HHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEEEECCCCHHHHHHHHHHHHC VLPDSSICRHVDNQVSFTYQDSQTRCQQVRSLPAVEFLWLILQHVLPKGLRRVRDYGLLR CCCCHHHHHHCCCCEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC GNAKKLRQQIQLMLAVAGAVFPMLPEVKRTLAVRYCPCCHQAMHFMGVHMHHRPTGANIT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC A C >Mature Secondary Structure SQFIDILRQHLADFRRRYAHQITPEIHAAIHAMLSCRCNTARVSCWDCQTCEQQLEFPL CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHCCCCC SCGHRSCPQCQHGTTCDWLDKQQAKLLPVNYFMVTFTLPFELRAIAKSQPEPFYHAMFTV CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCHHHHHHHCCCCCHHHHHHHHH AASVLKDFAARSPKLSGDIGFTGVLHTHSRRRDYHPHLHFIIPAGSYHSGKRQWRKCQTH HHHHHHHHHHCCCCCCCCCCCEEEECCCHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHH YLFNAFNLAKVWRARLLAYLSDTFQLTLPHQSHSKWVVDCQFVGKGEPALQYLSRYLYRG HHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEEEECCCCHHHHHHHHHHHHC VLPDSSICRHVDNQVSFTYQDSQTRCQQVRSLPAVEFLWLILQHVLPKGLRRVRDYGLLR CCCCHHHHHHCCCCEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC GNAKKLRQQIQLMLAVAGAVFPMLPEVKRTLAVRYCPCCHQAMHFMGVHMHHRPTGANIT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC A C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]