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The map label for this gene is 160875348

Identifier: 160875348

GI number: 160875348

Start: 2654472

End: 2656406

Strand: Reverse

Name: 160875348

Synonym: Sbal195_2235

Alternate gene names: NA

Gene position: 2656406-2654472 (Counterclockwise)

Preceding gene: 160875349

Following gene: 160875347

Centisome position: 49.68

GC content: 43.36

Gene sequence:

>1935_bases
ATGGCTCAACAAATCTTTAAAGCCAATATGGTTATTTGTCGCAATAATCGTGACTACCGGATAGTCATGCTCGATGACAC
GTTAGTGACACTAGAGGTTGTGGACAGCAAACATCATCAGGTGTTATCGATTGACCAGCTATTGTCTGAATATCAACTAG
GAAGTTTGAGCCTCCCTAAGACAAATCTGAATCTTGACCAATCTTGGCTAAACGAACAACAGAAGGCTGATCTTCGGCGT
TATAACACCTACCTAAACTATCTAGACAAACTCGAATACCCAGGTGCAATACGTTCACTCAATATGGCTATTTCGACCTG
CGGAGAGATATTAAATGAACCGGTGAATTGCCGTCCATCAACATCAACACTGCGCCGCTGGTATTCAAAATGGCTAAACA
ATAATAGACAATTCATCTATCTGCTGGCCTCCAGAAAACACGATCCAAACCTGACACTCAGCTGCAGAATCGATGCAGCG
ATGCGTTCTCTCGTCGACGATGTCATTGATTGTTTTTATCTGACTCTTAATGGCCCCAACGCGGCGGATTGTTACCGAAC
GCTTATGCAACAACACAGGCGCATGGCACTTGACTGCCCAATGATATCAAAATCGACATTTTACAGAGAAATAAAAAAAT
TAGATGAAAGCGTTATTATTAGGCGGCGGCAAGGTTCGGTCGCTGCAAATAAATATCTGCGCACTGCAAACCATCAATAT
CAGGTCAATGGGCTATTTGAAAGATGTGAAATGGATGCGGTTCACGTCGGTATTTATCTCGTTGATCAACATGGCGATAT
CGTTGGGAAGCCGATCATTTTCTTGATGATTGATGCTTTTAGCCGCTGCATTATGGGAATGCATATCAGTATCCAAGAAG
GAGAAACCACTAATGCAGCGGTGAGCGCATTACGCCATGCCATTTTGCCCAAATCCAATCAACAATATTCCTTTATGGAA
AATCCATGGACATGCCATGGTACGCCCATGGATCTGTACGTCGATTCTGGCGCAGCATTCATTAATGAATCATTCGACGC
ACTATTAGCTCAACTCAAGATCAATCGAATCGCTGGGCCGTCACGCCAGCCCTGGAAACACAGTTTTATTGAACGCTTTA
ATAGTACGTTACGCGACAAACTCAAGGGGATACCTGGATATGTCGGAAAATTAACGGATGGTTTCACCTATGATCACCCG
GCAAAGCACTATGCCACCCTGACGGTCGAGGAATTCGAAAAGATTGTCTGTATTCTCATCAATGATATATACCATCAAGA
AGCGCATGCAGGAGTAGGAAATCAAACGCCAATAGCGATGTGGAACACACATATTCGCTATTCTCCGGCTATTGTGCCTG
CCAATGTTGCGATATTTGATCTTTACCTGCGGCAACAAAAACGAGGCACACTCCAGCAATTAAAGGGATTGCAGTATAAA
AATCAGTTTTTTAATTCCATGGAATTACGAAACCTTTTTGAACAATTAAAAAAGAATAGTCGTGATCGCGGCAAAGTCAC
TTTTTATGTTGATGAGCTAAACGCCAGTAATATCATGGTCATTAACCCGTTAAACCAATCTGTGTTAACTGTGCCTAACA
CCAACAAATTAGCTTGGGGAAAAACCTTCCTGCAACTGAAAATGACCAAGAAAATTTTCATGCCTAACGCAGGTGAACTG
AAGGTCAACGATATCACAAAACAGGCCCTCGATCGCAAAAAGAAAGCCGCTCGAGACGTGAAAACGAGCCACAATCTTGC
CGATGAGACGTTGTCCATGGACACAGCGCTGACTCAAGATGTTATTCAAGGCATGTTAACTAAACGTGAAACAGTGGCTC
ATCAGGCGCTGGTATTATCACCAGCAAAACCGACGGGCAGTGATGTCCCAGAATCCGCCGTGATCCCTAAAATAATCAAT
TACCAAACCAGCTAG

Upstream 100 bases:

>100_bases
CAATGTCATGTTTATGATCCGATGATCCTATTAGCAAATCGATGCTACACATTCGACTTAACTTGTATGTTAAGCCCATT
AACTCATCTGGACAGATCTT

Downstream 100 bases:

>100_bases
GAATAACACATGGATCACTATCAACCTCAACGAAAGCCTATCACCACAGCATTTTTATCTCGTTCAGTTTACCACTTTGA
GTGCAATGCAGTGATTGCCG

Product: integrase catalytic subunit

Products: NA

Alternate protein names: ORF 480 [H]

Number of amino acids: Translated: 644; Mature: 643

Protein sequence:

>644_residues
MAQQIFKANMVICRNNRDYRIVMLDDTLVTLEVVDSKHHQVLSIDQLLSEYQLGSLSLPKTNLNLDQSWLNEQQKADLRR
YNTYLNYLDKLEYPGAIRSLNMAISTCGEILNEPVNCRPSTSTLRRWYSKWLNNNRQFIYLLASRKHDPNLTLSCRIDAA
MRSLVDDVIDCFYLTLNGPNAADCYRTLMQQHRRMALDCPMISKSTFYREIKKLDESVIIRRRQGSVAANKYLRTANHQY
QVNGLFERCEMDAVHVGIYLVDQHGDIVGKPIIFLMIDAFSRCIMGMHISIQEGETTNAAVSALRHAILPKSNQQYSFME
NPWTCHGTPMDLYVDSGAAFINESFDALLAQLKINRIAGPSRQPWKHSFIERFNSTLRDKLKGIPGYVGKLTDGFTYDHP
AKHYATLTVEEFEKIVCILINDIYHQEAHAGVGNQTPIAMWNTHIRYSPAIVPANVAIFDLYLRQQKRGTLQQLKGLQYK
NQFFNSMELRNLFEQLKKNSRDRGKVTFYVDELNASNIMVINPLNQSVLTVPNTNKLAWGKTFLQLKMTKKIFMPNAGEL
KVNDITKQALDRKKKAARDVKTSHNLADETLSMDTALTQDVIQGMLTKRETVAHQALVLSPAKPTGSDVPESAVIPKIIN
YQTS

Sequences:

>Translated_644_residues
MAQQIFKANMVICRNNRDYRIVMLDDTLVTLEVVDSKHHQVLSIDQLLSEYQLGSLSLPKTNLNLDQSWLNEQQKADLRR
YNTYLNYLDKLEYPGAIRSLNMAISTCGEILNEPVNCRPSTSTLRRWYSKWLNNNRQFIYLLASRKHDPNLTLSCRIDAA
MRSLVDDVIDCFYLTLNGPNAADCYRTLMQQHRRMALDCPMISKSTFYREIKKLDESVIIRRRQGSVAANKYLRTANHQY
QVNGLFERCEMDAVHVGIYLVDQHGDIVGKPIIFLMIDAFSRCIMGMHISIQEGETTNAAVSALRHAILPKSNQQYSFME
NPWTCHGTPMDLYVDSGAAFINESFDALLAQLKINRIAGPSRQPWKHSFIERFNSTLRDKLKGIPGYVGKLTDGFTYDHP
AKHYATLTVEEFEKIVCILINDIYHQEAHAGVGNQTPIAMWNTHIRYSPAIVPANVAIFDLYLRQQKRGTLQQLKGLQYK
NQFFNSMELRNLFEQLKKNSRDRGKVTFYVDELNASNIMVINPLNQSVLTVPNTNKLAWGKTFLQLKMTKKIFMPNAGEL
KVNDITKQALDRKKKAARDVKTSHNLADETLSMDTALTQDVIQGMLTKRETVAHQALVLSPAKPTGSDVPESAVIPKIIN
YQTS
>Mature_643_residues
AQQIFKANMVICRNNRDYRIVMLDDTLVTLEVVDSKHHQVLSIDQLLSEYQLGSLSLPKTNLNLDQSWLNEQQKADLRRY
NTYLNYLDKLEYPGAIRSLNMAISTCGEILNEPVNCRPSTSTLRRWYSKWLNNNRQFIYLLASRKHDPNLTLSCRIDAAM
RSLVDDVIDCFYLTLNGPNAADCYRTLMQQHRRMALDCPMISKSTFYREIKKLDESVIIRRRQGSVAANKYLRTANHQYQ
VNGLFERCEMDAVHVGIYLVDQHGDIVGKPIIFLMIDAFSRCIMGMHISIQEGETTNAAVSALRHAILPKSNQQYSFMEN
PWTCHGTPMDLYVDSGAAFINESFDALLAQLKINRIAGPSRQPWKHSFIERFNSTLRDKLKGIPGYVGKLTDGFTYDHPA
KHYATLTVEEFEKIVCILINDIYHQEAHAGVGNQTPIAMWNTHIRYSPAIVPANVAIFDLYLRQQKRGTLQQLKGLQYKN
QFFNSMELRNLFEQLKKNSRDRGKVTFYVDELNASNIMVINPLNQSVLTVPNTNKLAWGKTFLQLKMTKKIFMPNAGELK
VNDITKQALDRKKKAARDVKTSHNLADETLSMDTALTQDVIQGMLTKRETVAHQALVLSPAKPTGSDVPESAVIPKIINY
QTS

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR015378
- InterPro:   IPR009004 [H]

Pfam domain/function: PF09299 Mu-transpos_C; PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 73540; Mature: 73408

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQQIFKANMVICRNNRDYRIVMLDDTLVTLEVVDSKHHQVLSIDQLLSEYQLGSLSLPK
CCCHHHCCCEEEEECCCCEEEEEECCCEEEEEEECCCCCCEEEHHHHHHHHCCCCCCCCC
TNLNLDQSWLNEQQKADLRRYNTYLNYLDKLEYPGAIRSLNMAISTCGEILNEPVNCRPS
CCCCCCHHHHCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
TSTLRRWYSKWLNNNRQFIYLLASRKHDPNLTLSCRIDAAMRSLVDDVIDCFYLTLNGPN
HHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEEHHHHHHHHHHHHHHEEEEECCCC
AADCYRTLMQQHRRMALDCPMISKSTFYREIKKLDESVIIRRRQGSVAANKYLRTANHQY
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHCCCCE
QVNGLFERCEMDAVHVGIYLVDQHGDIVGKPIIFLMIDAFSRCIMGMHISIQEGETTNAA
EECHHHHHHCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCHHHH
VSALRHAILPKSNQQYSFMENPWTCHGTPMDLYVDSGAAFINESFDALLAQLKINRIAGP
HHHHHHHHCCCCCCCCEECCCCEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCC
SRQPWKHSFIERFNSTLRDKLKGIPGYVGKLTDGFTYDHPAKHYATLTVEEFEKIVCILI
CCCCHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCHHEEEEEHHHHHHHHHHHH
NDIYHQEAHAGVGNQTPIAMWNTHIRYSPAIVPANVAIFDLYLRQQKRGTLQQLKGLQYK
HHHHHHHHHCCCCCCCCEEEEECCEEECCCEEECCHHHHHHHHHHHHCCHHHHHHCCHHH
NQFFNSMELRNLFEQLKKNSRDRGKVTFYVDELNASNIMVINPLNQSVLTVPNTNKLAWG
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEECCCCCEEECCCCCCEECC
KTFLQLKMTKKIFMPNAGELKVNDITKQALDRKKKAARDVKTSHNLADETLSMDTALTQD
HHHHEEEHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
VIQGMLTKRETVAHQALVLSPAKPTGSDVPESAVIPKIINYQTS
HHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCHHHCCCCC
>Mature Secondary Structure 
AQQIFKANMVICRNNRDYRIVMLDDTLVTLEVVDSKHHQVLSIDQLLSEYQLGSLSLPK
CCHHHCCCEEEEECCCCEEEEEECCCEEEEEEECCCCCCEEEHHHHHHHHCCCCCCCCC
TNLNLDQSWLNEQQKADLRRYNTYLNYLDKLEYPGAIRSLNMAISTCGEILNEPVNCRPS
CCCCCCHHHHCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
TSTLRRWYSKWLNNNRQFIYLLASRKHDPNLTLSCRIDAAMRSLVDDVIDCFYLTLNGPN
HHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEEHHHHHHHHHHHHHHEEEEECCCC
AADCYRTLMQQHRRMALDCPMISKSTFYREIKKLDESVIIRRRQGSVAANKYLRTANHQY
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHCCCCE
QVNGLFERCEMDAVHVGIYLVDQHGDIVGKPIIFLMIDAFSRCIMGMHISIQEGETTNAA
EECHHHHHHCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCHHHH
VSALRHAILPKSNQQYSFMENPWTCHGTPMDLYVDSGAAFINESFDALLAQLKINRIAGP
HHHHHHHHCCCCCCCCEECCCCEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCC
SRQPWKHSFIERFNSTLRDKLKGIPGYVGKLTDGFTYDHPAKHYATLTVEEFEKIVCILI
CCCCHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCHHEEEEEHHHHHHHHHHHH
NDIYHQEAHAGVGNQTPIAMWNTHIRYSPAIVPANVAIFDLYLRQQKRGTLQQLKGLQYK
HHHHHHHHHCCCCCCCCEEEEECCEEECCCEEECCHHHHHHHHHHHHCCHHHHHHCCHHH
NQFFNSMELRNLFEQLKKNSRDRGKVTFYVDELNASNIMVINPLNQSVLTVPNTNKLAWG
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEECCCCCEEECCCCCCEECC
KTFLQLKMTKKIFMPNAGELKVNDITKQALDRKKKAARDVKTSHNLADETLSMDTALTQD
HHHHEEEHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
VIQGMLTKRETVAHQALVLSPAKPTGSDVPESAVIPKIINYQTS
HHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2170815 [H]