Click here to switch to the map view.

The map label for this gene is rpfG [H]

Identifier: 160875335

GI number: 160875335

Start: 2637243

End: 2638814

Strand: Reverse

Name: rpfG [H]

Synonym: Sbal195_2222

Alternate gene names: 160875335

Gene position: 2638814-2637243 (Counterclockwise)

Preceding gene: 160875338

Following gene: 160875333

Centisome position: 49.35

GC content: 43.0

Gene sequence:

>1572_bases
ATGCTGATTGATCTTGCAAAGAAAAATCCGCTGTTTTCCGGTAAAAAGCTTACCGAGACAACTGCATCAGGTATTCCTTG
GAAGGTATTAGTGGTCGATGATGAACCTGATGTTCATACCGTCACTAAACTTGCCCTCTCCCGCTTTAAACTCGATGGCC
GCCCGCTTACTTTTATCAACGCCTACAGTGCCGAACAAGCAAAAGAGTTGATGAATCAGGAACATGATATCGCCATCGCC
TTTATTGATGTTGTGATGGAGAGTGATCATGCGGGCTTAGAATTAGTAAAATGGATCCGCGAAGAGCTGCAAAATAAAAC
CACTCGACTAATCCTGCGTACAGGCCAGCCAGGTCAAGCACCTGAAGAAGACGTTATCGTTAATTATGATATTAATGATT
ACAAAGCCAAAGCTGAACTCGATTCACGTAAACTGATGACCAGCGTCTACTCTGCCCTACGTTCTTACCGCGATATTATG
GAAATTGAACAAGCAAGGCGCACCCAAATAAATCACCGTAAAGGGCTAGAAAGAGTGCTAGAAGCTACATCTGGATTATT
TGAGCTGCGCACCCTGCATAAATTTGCCGATGGCCTGCTAACTCAAGTCGCCACCCTACTCAATCTGGATTCTGAAACCT
TATTGCTAACGTGTAATGCCATTGATGCCATAAGCGGTCATCTGGATCCTGTGAACATAGAAATCCTCGCAGGCACAGGC
CAATTCTCAAATAAATCCCATATTACTCAATTACCAGAGCATATCGACCGCTTACTGCGCAGTGCGATCAAGCAAAAACG
CTGCCTGTATGAAGACAATTGCTTTATCGGTTACTTCCCCACAAAAAGCGGGTTAATCAATCTACTGTATATGGATGGTA
TTGATAAAATTGATGATCTTGATAAGAAACTTATTGATATTTTTGCTATCAACGTCGGCGTTGCATTTGAAAATTTACTG
CTCAATCAAGAAGTCGAAGATACCCAATCTGAACTCATTCTGCGTTTAGGGGATGTGGTTGAAAGCCGTTCAAAAGAAGC
CGCGAACCATGTGAAACGTATGGCAGAATATTGCTCTCAGTTGGCCTTACTCGCTGGTTTACCTGAATACGAAGCTGATT
TACTACGCCGTGCTTCACCTATGCATGACATAGGTAAGATAGCGATCCCCGATGCGGTTCTGCTCAAACCTGGCAAGTTA
GATGATGAAGAATGGAAAGTCATGCGTCAGCACCCTACAATTGGCCATCAGATTTTGGCAAATTCTGAGCGACCCATACT
AAAGGCGGCATCAATTATTGCACTACAACACCATGAAAAATATGATGGTTCTGGCTATCCTGCAAATTTAAAACAAGACG
AAATTCACATTTTCGCGCGCATTGTTGCCATTGCAGATGTGTTTGATGCACTTTCCCATGCCCGCTGTTATAAAACGGCC
TGGCCTTTAGAAGAAGTGTTAGCTGAAATGCGTAAAGGCGCTGCGAAACACTTTGACCCGCACTTACTACAGCTCTTTAT
TGATAATGTGGATATTTTTGTCAAAGTAAAAGACAGTTGGAAAGATAGTTAA

Upstream 100 bases:

>100_bases
GCCACTCACCTCGCTATTTAATGTAAGAATTTGCACTGCATTGAAATGTGTCTACTACACTGATTATGTGATCATTATTT
TTATTTGAATGAGGTATCGA

Downstream 100 bases:

>100_bases
TCCTTAATCACCCGAGTTAATACTCTCTAATAATACGCTGAGGACGATTCGAATAAATATCTAGCCAGTCTTAACCATTG
TTATCCGCAAGAAAATCAAA

Product: response regulator receiver modulated metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 523; Mature: 523

Protein sequence:

>523_residues
MLIDLAKKNPLFSGKKLTETTASGIPWKVLVVDDEPDVHTVTKLALSRFKLDGRPLTFINAYSAEQAKELMNQEHDIAIA
FIDVVMESDHAGLELVKWIREELQNKTTRLILRTGQPGQAPEEDVIVNYDINDYKAKAELDSRKLMTSVYSALRSYRDIM
EIEQARRTQINHRKGLERVLEATSGLFELRTLHKFADGLLTQVATLLNLDSETLLLTCNAIDAISGHLDPVNIEILAGTG
QFSNKSHITQLPEHIDRLLRSAIKQKRCLYEDNCFIGYFPTKSGLINLLYMDGIDKIDDLDKKLIDIFAINVGVAFENLL
LNQEVEDTQSELILRLGDVVESRSKEAANHVKRMAEYCSQLALLAGLPEYEADLLRRASPMHDIGKIAIPDAVLLKPGKL
DDEEWKVMRQHPTIGHQILANSERPILKAASIIALQHHEKYDGSGYPANLKQDEIHIFARIVAIADVFDALSHARCYKTA
WPLEEVLAEMRKGAAKHFDPHLLQLFIDNVDIFVKVKDSWKDS

Sequences:

>Translated_523_residues
MLIDLAKKNPLFSGKKLTETTASGIPWKVLVVDDEPDVHTVTKLALSRFKLDGRPLTFINAYSAEQAKELMNQEHDIAIA
FIDVVMESDHAGLELVKWIREELQNKTTRLILRTGQPGQAPEEDVIVNYDINDYKAKAELDSRKLMTSVYSALRSYRDIM
EIEQARRTQINHRKGLERVLEATSGLFELRTLHKFADGLLTQVATLLNLDSETLLLTCNAIDAISGHLDPVNIEILAGTG
QFSNKSHITQLPEHIDRLLRSAIKQKRCLYEDNCFIGYFPTKSGLINLLYMDGIDKIDDLDKKLIDIFAINVGVAFENLL
LNQEVEDTQSELILRLGDVVESRSKEAANHVKRMAEYCSQLALLAGLPEYEADLLRRASPMHDIGKIAIPDAVLLKPGKL
DDEEWKVMRQHPTIGHQILANSERPILKAASIIALQHHEKYDGSGYPANLKQDEIHIFARIVAIADVFDALSHARCYKTA
WPLEEVLAEMRKGAAKHFDPHLLQLFIDNVDIFVKVKDSWKDS
>Mature_523_residues
MLIDLAKKNPLFSGKKLTETTASGIPWKVLVVDDEPDVHTVTKLALSRFKLDGRPLTFINAYSAEQAKELMNQEHDIAIA
FIDVVMESDHAGLELVKWIREELQNKTTRLILRTGQPGQAPEEDVIVNYDINDYKAKAELDSRKLMTSVYSALRSYRDIM
EIEQARRTQINHRKGLERVLEATSGLFELRTLHKFADGLLTQVATLLNLDSETLLLTCNAIDAISGHLDPVNIEILAGTG
QFSNKSHITQLPEHIDRLLRSAIKQKRCLYEDNCFIGYFPTKSGLINLLYMDGIDKIDDLDKKLIDIFAINVGVAFENLL
LNQEVEDTQSELILRLGDVVESRSKEAANHVKRMAEYCSQLALLAGLPEYEADLLRRASPMHDIGKIAIPDAVLLKPGKL
DDEEWKVMRQHPTIGHQILANSERPILKAASIIALQHHEKYDGSGYPANLKQDEIHIFARIVAIADVFDALSHARCYKTA
WPLEEVLAEMRKGAAKHFDPHLLQLFIDNVDIFVKVKDSWKDS

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG3437

COG function: function code KT; Response regulator containing a CheY-like receiver domain and an HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 59041; Mature: 59041

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIDLAKKNPLFSGKKLTETTASGIPWKVLVVDDEPDVHTVTKLALSRFKLDGRPLTFIN
CEEECCCCCCCCCCCCCCHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEE
AYSAEQAKELMNQEHDIAIAFIDVVMESDHAGLELVKWIREELQNKTTRLILRTGQPGQA
CCCHHHHHHHHCCCCCEEEEEEEHHHCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCC
PEEDVIVNYDINDYKAKAELDSRKLMTSVYSALRSYRDIMEIEQARRTQINHRKGLERVL
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EATSGLFELRTLHKFADGLLTQVATLLNLDSETLLLTCNAIDAISGHLDPVNIEILAGTG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHCCCCCCEEEEEEECCC
QFSNKSHITQLPEHIDRLLRSAIKQKRCLYEDNCFIGYFPTKSGLINLLYMDGIDKIDDL
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEECCCCHHHHH
DKKLIDIFAINVGVAFENLLLNQEVEDTQSELILRLGDVVESRSKEAANHVKRMAEYCSQ
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LALLAGLPEYEADLLRRASPMHDIGKIAIPDAVLLKPGKLDDEEWKVMRQHPTIGHQILA
HHHHHCCCHHHHHHHHHCCCCHHCCCCCCCCCEEECCCCCCCHHHHHHHHCCCCCHHHHC
NSERPILKAASIIALQHHEKYDGSGYPANLKQDEIHIFARIVAIADVFDALSHARCYKTA
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
WPLEEVLAEMRKGAAKHFDPHLLQLFIDNVDIFVKVKDSWKDS
CCHHHHHHHHHHCHHHCCCHHHHHHHHCCCEEEEEEECCCCCC
>Mature Secondary Structure
MLIDLAKKNPLFSGKKLTETTASGIPWKVLVVDDEPDVHTVTKLALSRFKLDGRPLTFIN
CEEECCCCCCCCCCCCCCHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEE
AYSAEQAKELMNQEHDIAIAFIDVVMESDHAGLELVKWIREELQNKTTRLILRTGQPGQA
CCCHHHHHHHHCCCCCEEEEEEEHHHCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCC
PEEDVIVNYDINDYKAKAELDSRKLMTSVYSALRSYRDIMEIEQARRTQINHRKGLERVL
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EATSGLFELRTLHKFADGLLTQVATLLNLDSETLLLTCNAIDAISGHLDPVNIEILAGTG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHCCCCCCEEEEEEECCC
QFSNKSHITQLPEHIDRLLRSAIKQKRCLYEDNCFIGYFPTKSGLINLLYMDGIDKIDDL
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEECCCCHHHHH
DKKLIDIFAINVGVAFENLLLNQEVEDTQSELILRLGDVVESRSKEAANHVKRMAEYCSQ
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LALLAGLPEYEADLLRRASPMHDIGKIAIPDAVLLKPGKLDDEEWKVMRQHPTIGHQILA
HHHHHCCCHHHHHHHHHCCCCHHCCCCCCCCCEEECCCCCCCHHHHHHHHCCCCCHHHHC
NSERPILKAASIIALQHHEKYDGSGYPANLKQDEIHIFARIVAIADVFDALSHARCYKTA
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
WPLEEVLAEMRKGAAKHFDPHLLQLFIDNVDIFVKVKDSWKDS
CCHHHHHHHHHHCHHHCCCHHHHHHHHCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]