| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875256
Identifier: 160875256
GI number: 160875256
Start: 2547863
End: 2549023
Strand: Direct
Name: 160875256
Synonym: Sbal195_2143
Alternate gene names: NA
Gene position: 2547863-2549023 (Clockwise)
Preceding gene: 160875255
Following gene: 160875257
Centisome position: 47.65
GC content: 52.11
Gene sequence:
>1161_bases ATGTCTGCAACCACCACAGCTTTGGGTTTTGCCGCCTTAAGCTGCCAGTTAAACGTCAATTCAGAAGCAACCTTTGTGGT TGGTGAAGATGGCTACATTCAGGCGCTGCCTGATGGTCACTTTGCTGCCGTAGATGGTCGCCCTGATGATGTGGCTGGTG GCAAGTGGTTGATGGATAGCGTTGCGTTCGCGGCCCTGCAAGCAAATACCCCCCATAAAGCTGGTGATCTGGTTATTGAC TATGAACACCAAACCCTCAACAAAGAGAAGAATGGCCAGCCTGCACCCGCTGCGGGTTGGTTCAACATCGATGACGTGCA ATATCGACAAGGGCAGGGCTTGTTCATTAAGCCGCGCTTTACCGATAACGCCATCGCTTACCTCACCGCCAAAGAATACA AGTACTTCAGCCTAGTGTTCGGTTATGACACCAGCACTGGCCGCCCGCAATTTATCCACTCAGCCGCGTTAACTAATCGC CCAGGTGTCGATGGCATGCTGCCACTCGCATCGTTGGCTGCACTGGTCACCCTCACTGCAAACGAACTTTCTGTAAACAC ACCTAGCCAATCCAGCCAACCGGAGGAACTCCATGTGAACTCATTACTTAAAAAAATCTTAGCTGCCTTGGGCGTTGAAA TTCCCGATGATGTGACAGCTTTAACCGCTGAGCAAGAGGTCGCGGCGCTATCTGCACTTAATACGCTAACCACGGCAGCA AATAGCGTTGATAGCTTAAAGCAACAGCTTACCGCGCTGAGTGCTACATCTCCCTCGGTTGATCTAAGCCAGTACGTTCC AGCGGCCACTGTCGCTGCACTGCGCGCGCAACTGGTTGCGCTAACTGCTGAAAACGGCGTGCTTACTGTTGAGCAAACCG TGAAGGCGGCGATAGATGAAGGCAAAGCCTTTGAGTGTGAACGTGATTACCTAACCAAGTTAGGCCAGCAATCCATGGCG GCGCTTACAGCCAACCTGGGTGAGCGTGTGGCTATTGCCGCATTAACGGCCAAGCAAACCACCACAGTTCCCGACCCTAT CAAGGACAAGGAAACCAAACTCGCGGCACTGACTGCCGACCAAATCAAAATGGCTGATTCTTGGGGCATGTCGCACGCTG ACTTTGCTAAAGCTATCGCCGCTGATCAGGAGCAAAAATAA
Upstream 100 bases:
>100_bases GCAATAAACCTAAGAATGTAATCCCGAAACCTTTCCAATCCGCAAGTGATTAAAGCGAGATCATCATAGGCACTCCAATG TTATTGAGAGTGCCTTTTTT
Downstream 100 bases:
>100_bases TGGCTGCTATTAACGCCCCAGTATTACACGCTCTGCGCACTATGGTGCGTAGCGAGTTTCAAAATGCTTTAGCTAAGACA GATCCACTGTATTTAAAAAT
Product: prophage MuSo1, protein Gp32
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 386; Mature: 385
Protein sequence:
>386_residues MSATTTALGFAALSCQLNVNSEATFVVGEDGYIQALPDGHFAAVDGRPDDVAGGKWLMDSVAFAALQANTPHKAGDLVID YEHQTLNKEKNGQPAPAAGWFNIDDVQYRQGQGLFIKPRFTDNAIAYLTAKEYKYFSLVFGYDTSTGRPQFIHSAALTNR PGVDGMLPLASLAALVTLTANELSVNTPSQSSQPEELHVNSLLKKILAALGVEIPDDVTALTAEQEVAALSALNTLTTAA NSVDSLKQQLTALSATSPSVDLSQYVPAATVAALRAQLVALTAENGVLTVEQTVKAAIDEGKAFECERDYLTKLGQQSMA ALTANLGERVAIAALTAKQTTTVPDPIKDKETKLAALTADQIKMADSWGMSHADFAKAIAADQEQK
Sequences:
>Translated_386_residues MSATTTALGFAALSCQLNVNSEATFVVGEDGYIQALPDGHFAAVDGRPDDVAGGKWLMDSVAFAALQANTPHKAGDLVID YEHQTLNKEKNGQPAPAAGWFNIDDVQYRQGQGLFIKPRFTDNAIAYLTAKEYKYFSLVFGYDTSTGRPQFIHSAALTNR PGVDGMLPLASLAALVTLTANELSVNTPSQSSQPEELHVNSLLKKILAALGVEIPDDVTALTAEQEVAALSALNTLTTAA NSVDSLKQQLTALSATSPSVDLSQYVPAATVAALRAQLVALTAENGVLTVEQTVKAAIDEGKAFECERDYLTKLGQQSMA ALTANLGERVAIAALTAKQTTTVPDPIKDKETKLAALTADQIKMADSWGMSHADFAKAIAADQEQK >Mature_385_residues SATTTALGFAALSCQLNVNSEATFVVGEDGYIQALPDGHFAAVDGRPDDVAGGKWLMDSVAFAALQANTPHKAGDLVIDY EHQTLNKEKNGQPAPAAGWFNIDDVQYRQGQGLFIKPRFTDNAIAYLTAKEYKYFSLVFGYDTSTGRPQFIHSAALTNRP GVDGMLPLASLAALVTLTANELSVNTPSQSSQPEELHVNSLLKKILAALGVEIPDDVTALTAEQEVAALSALNTLTTAAN SVDSLKQQLTALSATSPSVDLSQYVPAATVAALRAQLVALTAENGVLTVEQTVKAAIDEGKAFECERDYLTKLGQQSMAA LTANLGERVAIAALTAKQTTTVPDPIKDKETKLAALTADQIKMADSWGMSHADFAKAIAADQEQK
Specific function: Potential protease involved in virion morphogenesis [H]
COG id: COG4388
COG function: function code R; Mu-like prophage I protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase U35 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019295 - InterPro: IPR012106 [H]
Pfam domain/function: PF10123 Mu-like_Pro [H]
EC number: NA
Molecular weight: Translated: 40857; Mature: 40726
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATTTALGFAALSCQLNVNSEATFVVGEDGYIQALPDGHFAAVDGRPDDVAGGKWLMDS CCCCHHHHEEEEEEEEEECCCCEEEEECCCCEEEECCCCCEEEECCCCCCCCCCHHHHHH VAFAALQANTPHKAGDLVIDYEHQTLNKEKNGQPAPAAGWFNIDDVQYRQGQGLFIKPRF HHHHHHCCCCCCCCCCEEEEECHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEECCC TDNAIAYLTAKEYKYFSLVFGYDTSTGRPQFIHSAALTNRPGVDGMLPLASLAALVTLTA CCCEEEEEEECCCEEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHEEC NELSVNTPSQSSQPEELHVNSLLKKILAALGVEIPDDVTALTAEQEVAALSALNTLTTAA CCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH NSVDSLKQQLTALSATSPSVDLSQYVPAATVAALRAQLVALTAENGVLTVEQTVKAAIDE HHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHEEEEECCCEEEHHHHHHHHHCC GKAFECERDYLTKLGQQSMAALTANLGERVAIAALTAKQTTTVPDPIKDKETKLAALTAD CCCEECCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEEHH QIKMADSWGMSHADFAKAIAADQEQK HHEEHHHCCCCHHHHHHHHHCCCCCC >Mature Secondary Structure SATTTALGFAALSCQLNVNSEATFVVGEDGYIQALPDGHFAAVDGRPDDVAGGKWLMDS CCCHHHHEEEEEEEEEECCCCEEEEECCCCEEEECCCCCEEEECCCCCCCCCCHHHHHH VAFAALQANTPHKAGDLVIDYEHQTLNKEKNGQPAPAAGWFNIDDVQYRQGQGLFIKPRF HHHHHHCCCCCCCCCCEEEEECHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEECCC TDNAIAYLTAKEYKYFSLVFGYDTSTGRPQFIHSAALTNRPGVDGMLPLASLAALVTLTA CCCEEEEEEECCCEEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHEEC NELSVNTPSQSSQPEELHVNSLLKKILAALGVEIPDDVTALTAEQEVAALSALNTLTTAA CCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH NSVDSLKQQLTALSATSPSVDLSQYVPAATVAALRAQLVALTAENGVLTVEQTVKAAIDE HHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHEEEEECCCEEEHHHHHHHHHCC GKAFECERDYLTKLGQQSMAALTANLGERVAIAALTAKQTTTVPDPIKDKETKLAALTAD CCCEECCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEEHH QIKMADSWGMSHADFAKAIAADQEQK HHEEHHHCCCCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]