| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875239
Identifier: 160875239
GI number: 160875239
Start: 2535300
End: 2535857
Strand: Direct
Name: 160875239
Synonym: Sbal195_2126
Alternate gene names: NA
Gene position: 2535300-2535857 (Clockwise)
Preceding gene: 160875238
Following gene: 160875240
Centisome position: 47.41
GC content: 40.68
Gene sequence:
>558_bases ATGATAAAAATTTTACTGATTCTTATCGTTGCCGCCATAGCTTATTTGCTTATGCCTGTTACTGTGAATGGCACTTTGTA TGTCGTATCAAACTCCGCCAATGTAGTGCCCATGCCTATTACTCAAATCAAGGTTTACCAGCTTAAAGAATTTCGAGAAG CGCTCTATAAAAAGCAACATTTTGCCAATCAACAATGCATGGGCTTACCTGATAAATCTGAGGTTGAATTGGCGTACCTG AGCGGCGGCCCAAACCGAGAAAACGCCAAAGCTAACTACGAACGGATCGTCTCGTGCGAGACCATAACCCTAATCAAAGA GATCCAAATACCACTAATTGAAACAATTCAAACCAATAAGGATGGAGAGTTTGCGCTTAACCGCTCACGGTTAGATAGCT TAGTTCTAGTGGTAGAGGGTAAGCGACAAGTTGGACAAACAACTGAGGAATATCTATGGCTACGGGTAATCCCTAAAGAT GGATTGATATCCCAAAAACTTGAGATCAACAATGGTAATCTAGTGAACGATATCAAGATTCAAAGTATACAGCTTTAA
Upstream 100 bases:
>100_bases ATAATAGTGTTTCAGAGTGGGTTCGTATGATTAATGCTGCTGAGGGGCGGCCAATAAAATCTTAGATTAAAAGATTTTAA ACTCATAAAAAGGACTTTGT
Downstream 100 bases:
>100_bases TAACTAACTACTGTAATAGTAGGAATAAAGGGAGTTTTACTATGGCAACTGCATATAAAATTAAAGAGTTTACGCTTGAT TTTAAAGAAATATTAAAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MIKILLILIVAAIAYLLMPVTVNGTLYVVSNSANVVPMPITQIKVYQLKEFREALYKKQHFANQQCMGLPDKSEVELAYL SGGPNRENAKANYERIVSCETITLIKEIQIPLIETIQTNKDGEFALNRSRLDSLVLVVEGKRQVGQTTEEYLWLRVIPKD GLISQKLEINNGNLVNDIKIQSIQL
Sequences:
>Translated_185_residues MIKILLILIVAAIAYLLMPVTVNGTLYVVSNSANVVPMPITQIKVYQLKEFREALYKKQHFANQQCMGLPDKSEVELAYL SGGPNRENAKANYERIVSCETITLIKEIQIPLIETIQTNKDGEFALNRSRLDSLVLVVEGKRQVGQTTEEYLWLRVIPKD GLISQKLEINNGNLVNDIKIQSIQL >Mature_185_residues MIKILLILIVAAIAYLLMPVTVNGTLYVVSNSANVVPMPITQIKVYQLKEFREALYKKQHFANQQCMGLPDKSEVELAYL SGGPNRENAKANYERIVSCETITLIKEIQIPLIETIQTNKDGEFALNRSRLDSLVLVVEGKRQVGQTTEEYLWLRVIPKD GLISQKLEINNGNLVNDIKIQSIQL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20870; Mature: 20870
Theoretical pI: Translated: 8.17; Mature: 8.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKILLILIVAAIAYLLMPVTVNGTLYVVSNSANVVPMPITQIKVYQLKEFREALYKKQH CHHHHHHHHHHHHHHHHEEEEECCEEEEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHH FANQQCMGLPDKSEVELAYLSGGPNRENAKANYERIVSCETITLIKEIQIPLIETIQTNK CCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHEEEHHHEEHHHHCCCCCEEEEECCC DGEFALNRSRLDSLVLVVEGKRQVGQTTEEYLWLRVIPKDGLISQKLEINNGNLVNDIKI CCCEEECHHCCCEEEEEEECCHHHCCCHHHEEEEEEECCCCCEEEEEEECCCCEEEEEEE QSIQL EEECC >Mature Secondary Structure MIKILLILIVAAIAYLLMPVTVNGTLYVVSNSANVVPMPITQIKVYQLKEFREALYKKQH CHHHHHHHHHHHHHHHHEEEEECCEEEEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHH FANQQCMGLPDKSEVELAYLSGGPNRENAKANYERIVSCETITLIKEIQIPLIETIQTNK CCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHEEEHHHEEHHHHCCCCCEEEEECCC DGEFALNRSRLDSLVLVVEGKRQVGQTTEEYLWLRVIPKDGLISQKLEINNGNLVNDIKI CCCEEECHHCCCEEEEEEECCHHHCCCHHHEEEEEEECCCCCEEEEEEECCCCEEEEEEE QSIQL EEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA