| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875230
Identifier: 160875230
GI number: 160875230
Start: 2530793
End: 2531329
Strand: Direct
Name: 160875230
Synonym: Sbal195_2117
Alternate gene names: NA
Gene position: 2530793-2531329 (Clockwise)
Preceding gene: 160875229
Following gene: 160875231
Centisome position: 47.33
GC content: 49.35
Gene sequence:
>537_bases ATGGCACAAGTCAAACGTTCAACCCCGTTAAGGCACAGCGCATGGTTGTTTATGTGCTGCTGTCGCAATCGAAAAGTCAG TTTTAGTGCTGAACAAGTTGGCGATGCATCGGGAATGCCCAAGTGCCTCGCGAATCGCTTTTTGCGTGATTTGTATCGAG AAGGGCGCTTAACACTCGAATGGAAAGGGCGTACAGGGCTGACCAACCGCTACTGGTTAAACGATGACAGCCCGTTAAAG CACCACTCTCAGTTCGCCAAGATTAAAGCGAATCAGCGGATCTGGAACAGCTGCCGCATCATGCGCAATTTCTCGATTGA AGAAATCATGGTCACAGCTAGGGTGGCGCGCTCAACGGTAAAGCGTTACCTCAATGCTCTGCAACGGGCAGGCTTGATCC GCATCAGAGCTATCGAAGAGGAAATGGTCATTTATCACCTCAACGTTGACTGTGGCGCTTTAGCACCAGAGCTAATCGAT GACGGTATTTATGCACCAACCAAATCGAAGTTTTATCCCTATAGAGAGGCGCTATGA
Upstream 100 bases:
>100_bases GTCTCGCCAAAATGAACGAACTTGATTACGTCACAGCAGAACACTGGGGGGCACAGCCATTCCATGGTGTTCGACGTCCA AGCCTTGTGGGTTAAGCGTT
Downstream 100 bases:
>100_bases ACAAGGAAAATTGGTTCCAAGTGCTTGAGTTAAAAGTCAGTGAGAGCAGCCAAGCGCAGATTGCCAGAGAGCTAGGTGTC AGTCCGACCATGCTTAATCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MAQVKRSTPLRHSAWLFMCCCRNRKVSFSAEQVGDASGMPKCLANRFLRDLYREGRLTLEWKGRTGLTNRYWLNDDSPLK HHSQFAKIKANQRIWNSCRIMRNFSIEEIMVTARVARSTVKRYLNALQRAGLIRIRAIEEEMVIYHLNVDCGALAPELID DGIYAPTKSKFYPYREAL
Sequences:
>Translated_178_residues MAQVKRSTPLRHSAWLFMCCCRNRKVSFSAEQVGDASGMPKCLANRFLRDLYREGRLTLEWKGRTGLTNRYWLNDDSPLK HHSQFAKIKANQRIWNSCRIMRNFSIEEIMVTARVARSTVKRYLNALQRAGLIRIRAIEEEMVIYHLNVDCGALAPELID DGIYAPTKSKFYPYREAL >Mature_177_residues AQVKRSTPLRHSAWLFMCCCRNRKVSFSAEQVGDASGMPKCLANRFLRDLYREGRLTLEWKGRTGLTNRYWLNDDSPLKH HSQFAKIKANQRIWNSCRIMRNFSIEEIMVTARVARSTVKRYLNALQRAGLIRIRAIEEEMVIYHLNVDCGALAPELIDD GIYAPTKSKFYPYREAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20716; Mature: 20585
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQVKRSTPLRHSAWLFMCCCRNRKVSFSAEQVGDASGMPKCLANRFLRDLYREGRLTLE CCCCCCCCCCCHHHHHHEEHHCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEE WKGRTGLTNRYWLNDDSPLKHHSQFAKIKANQRIWNSCRIMRNFSIEEIMVTARVARSTV ECCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH KRYLNALQRAGLIRIRAIEEEMVIYHLNVDCGALAPELIDDGIYAPTKSKFYPYREAL HHHHHHHHHCCEEEEEEECCEEEEEEECCCHHHCCHHHHCCCCCCCCCCCCCCHHHCC >Mature Secondary Structure AQVKRSTPLRHSAWLFMCCCRNRKVSFSAEQVGDASGMPKCLANRFLRDLYREGRLTLE CCCCCCCCCCHHHHHHEEHHCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEE WKGRTGLTNRYWLNDDSPLKHHSQFAKIKANQRIWNSCRIMRNFSIEEIMVTARVARSTV ECCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH KRYLNALQRAGLIRIRAIEEEMVIYHLNVDCGALAPELIDDGIYAPTKSKFYPYREAL HHHHHHHHHCCEEEEEEECCEEEEEEECCCHHHCCHHHHCCCCCCCCCCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA