| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875198
Identifier: 160875198
GI number: 160875198
Start: 2479638
End: 2482364
Strand: Reverse
Name: 160875198
Synonym: Sbal195_2085
Alternate gene names: NA
Gene position: 2482364-2479638 (Counterclockwise)
Preceding gene: 160875203
Following gene: 160875197
Centisome position: 46.42
GC content: 45.76
Gene sequence:
>2727_bases ATGATGCGATTTAAACCCAGTTTGCTAACCTTAGCGCTCATTGCCGCAGGTGCGAGTATGCACTCCTATGCGGCAGATGA AGTGGCGACAGATAAGACAGCTAAAGATGAAAATATTGAAGTGATTCAAGTCACTGGTATTCGTCGTAGCTTGCAAGAAT CCCAATCACTTAAAATGTCATCTTCTTCTATCGTTGAAGCCATTTCAGCGGAAGACATAGGTAAATTACCTGATGTCAGT ATTGCAGAATCCCTAGCACGATTACCTGGCGTATCGGCACAACGACTCGATGGTCGTGCCAACGTAATTTCTATCCGCGG TATGGGCCCTGACTTCACTACCGCCACATTAAATGGTCGCGAACAAGCCTCTGTGAACGATAACCGCAGTGTGGAATTCG ACCAATATCCATCTGAGTTATTAAATCGCGTCGTGGTTTACAAGACACCCGATGCCTCTGTTATGGCGCAAGCCATCGGC GGTACGGTTGATATGCAAACAATCAGTCCTTTAGCCCACGGTGAACAAACGATTGCCGTTTCGTTACGCGGCGAAATGAA CGATTTAGGTTCATTAAACAGCGGCTCAAGTGACACAGGCTACCGTGGCAGTATCTCTTATATTGACCAATTCGCCGATG ACACTATTGGTGTCGCCATTGGTTATGCTCGCATGATGTCACCTAACCAAGAAGAACGTTGGCAAGCTTGGGGTTACCCA ACCAATGACAATGGTGATAGCGTTTTAGGTGGTGCAAAACCTTTCGTTCGTTCAAGTGAATTAGAACGTGATGGCGTACT CGCCGTATTTGAATATGCGCCAAATACCACTTACCACTCGACCTTAGATATTTACTACTCAAAATTTACCGATGATCAAC GCCTACGAGGCATTGAAATACCTGGTGCTTGGGGCACAAACGGTGGCGTAATTCCGACAACAACTGATAATGGTTTAGTC ACAGAAGGTGTCATCAAAGGCGCTGAAGTCGTTATCCGTAACGACGTGAACAAACGTGATGCGGATTCTCTGTCTATTGG CTGGAATAACAAATTCAACATCAATGAAAACTGGAATGTTGAAGCCGATATCTCCATGTCTAGAGCTAACCGTACTGACA TAGGTATGGAAAGTTACTCAGGAACTGGCCGCGGTACAGGTGTGGGTGCGGTTGACGATTTAGGCTTTGCTTACAACGGT AAAGGCGGTTATGTATTTGACCATAACCTCGATTATTCTGATAAAAACCTGATCAAACTTGGCGATCCACTCGGTTGGGG GAGCCCGCTAGGCGCTAACACTCAAGACGGCTTTATCAACAAACCTGAAATTGAAGATGAGCTAAAATCCTTCCGTTTAA GCGCTGAATATGTGCTCGATGGCGGTGCCGTTCGTAGCGTTGAGTTTGGTGTCAATCGTACTAATCGCGATAAAACCAAA TTAGATAAAGGTTATTACCTGACACTCAAAGGTTATGACGGTTCTGCCAATTACACTATGGCAGTACCAGATCAATACTT ACTTGCACCAACGTCACTCGACTTCTTTGGCATGGGCAATGTATTAAGTTACGACTCGTTGGCTTTCTACAATGACGGTA ACTATACAGAAACTGACGTCGCTGATGTGGATCTTTCCCGCGCCACTAACTCTTGGGCTGTACAGGAAAAAGTGACAACG GGCTATGTGATGGCCAACCTTGAATCCGAAGTATTTGGTATTCCTTTGACTGGTAACGCAGGCTTACAAGCGGTTCATAC CGATCAGTCCTCTGACGGTACAGTGGCAACGGTTGAAAATGGCTTAGTGGTGTTAACACCGCGCACTGCGGGTGATTCCT ATGTTGAATGGCTGCCAAGCGTTAACTTAAGTTTCGAAGTCGCCGATAGCCAAGTGGTTCGTTTAGCCGCAGCGCGCACG TTAACCCGTTCACGTATGGACAAAATGAATGCCAACCTAAACTACACTTATTCAGCTAACCCAAGCGGTGGCATGGTTAA TTGGAGTGGTAACGCAGGTAATCCTGAGTTACGCCCATGGTTGGCCCGTCAATATGACTTAAGCTATGAAAACTATTTCA GCGACCAAGGTTATTTCTCGGTAGCGGTATTCTACAAAGATCTTGAAAACTTCGTTTACGATCAACATACAGACTTTGAT TTCAGCACCCTATTCCCACAAGGGCCTACTGATAACCCGATTGGCGATGTCACCCAACCTCAAAACGGTGAAGGTGGTTA TGTTCAAGGTGTTGAAGCCTCTGTATCTGTCGACTTTGGTATGTTTGCCGATGTGTTAAGTGGCTTTGGTACTGTTATTA GCGGCTCGTACAACGACAGTGAAGTGAAGGAAACCCCGACCAGCAATCCAACAACCTTGCCAGGTCTGTCAGAAAAAACC TTAAACGCGACGATCTACTATGAAAACTCAGGCTTTGAAGCACGCATTAGCTCACGCTACCGCAGCGACTTCCTAGGTGA AGTCACAAAGATCAGCCTGCAACGCGAAAACGTGAACATCAAAGCGGAAACTGTGGTTGATGCACAAATCGGTTATGACT TTAGCGAAAGCGGTATCGAGTCCCTGTATGGTTTATCAGTTCAGTTCCAAGTGAACAACTTAACCAACGAGCCTTTCACC TCTTACACTAGCGATGATCAACGTTTAGTCCGTGATTACCAAAACTATGGCCGTAACTTTATGTTAGGCGCGAACTATAA GTTCTAA
Upstream 100 bases:
>100_bases TTAAGCGCCCAGATACCAAAAAAAAGGCCGCAAACATAACGCGGTGATAACGATAAAACGCTCTACAAAGCGATAAAGCG ACTCCAAGGGGAAGAGAGAT
Downstream 100 bases:
>100_bases TCCTGCACGGCTTAAAGCCTCTGTAACCTGTTACAGAGGCTTTTTTACTTTATCATTTCAAGCCACTAGGCTAGTCATTC ATCTGCGTTAATTGATCACC
Product: outer membrane insertion C-terminal signal
Products: NA
Alternate protein names: NB-Dependent Receptor Subfamily; Nb-Dependent Receptor; NB-Dependent Receptor Plug; NB-Dependent Outer Membrane Receptor; Nb-Dependent Outer Membrane Receptor Protein; Outer Membrane Protein; Outer Membrane Insertion C-Terminal Signal; NB-Dependent Receptor Subfamily Protein; NB Dependent Receptor-Related Protein; NB-Dependent Receptor-Like Protein; NB-Dependent Receptor Protein; Nucleoside Diphosphate Kinase; Crossover Junction Endodeoxyribonuclease RuvC; NB-Dependent Outer Membrane Receptor Protein; NB Dependent Receptor; NB-Dependent Maltose Outer Membrane Transporter MalA; NB Dependent Receptor For Iron Chelates; 50S Ribosomal Protein L; NB-Dependent Outer Membrane Ferripyoverdine Receptor; 3-Dehydroquinate Synthase; DEAD/DEAH Box Helicase-Like; Peptidase; NB Dependent Receptor Protein; 1-(5-Phosphoribosyl)-5-; Argininosuccinate Synthase; NB-Dependent Receptor Domain Protein
Number of amino acids: Translated: 908; Mature: 908
Protein sequence:
>908_residues MMRFKPSLLTLALIAAGASMHSYAADEVATDKTAKDENIEVIQVTGIRRSLQESQSLKMSSSSIVEAISAEDIGKLPDVS IAESLARLPGVSAQRLDGRANVISIRGMGPDFTTATLNGREQASVNDNRSVEFDQYPSELLNRVVVYKTPDASVMAQAIG GTVDMQTISPLAHGEQTIAVSLRGEMNDLGSLNSGSSDTGYRGSISYIDQFADDTIGVAIGYARMMSPNQEERWQAWGYP TNDNGDSVLGGAKPFVRSSELERDGVLAVFEYAPNTTYHSTLDIYYSKFTDDQRLRGIEIPGAWGTNGGVIPTTTDNGLV TEGVIKGAEVVIRNDVNKRDADSLSIGWNNKFNINENWNVEADISMSRANRTDIGMESYSGTGRGTGVGAVDDLGFAYNG KGGYVFDHNLDYSDKNLIKLGDPLGWGSPLGANTQDGFINKPEIEDELKSFRLSAEYVLDGGAVRSVEFGVNRTNRDKTK LDKGYYLTLKGYDGSANYTMAVPDQYLLAPTSLDFFGMGNVLSYDSLAFYNDGNYTETDVADVDLSRATNSWAVQEKVTT GYVMANLESEVFGIPLTGNAGLQAVHTDQSSDGTVATVENGLVVLTPRTAGDSYVEWLPSVNLSFEVADSQVVRLAAART LTRSRMDKMNANLNYTYSANPSGGMVNWSGNAGNPELRPWLARQYDLSYENYFSDQGYFSVAVFYKDLENFVYDQHTDFD FSTLFPQGPTDNPIGDVTQPQNGEGGYVQGVEASVSVDFGMFADVLSGFGTVISGSYNDSEVKETPTSNPTTLPGLSEKT LNATIYYENSGFEARISSRYRSDFLGEVTKISLQRENVNIKAETVVDAQIGYDFSESGIESLYGLSVQFQVNNLTNEPFT SYTSDDQRLVRDYQNYGRNFMLGANYKF
Sequences:
>Translated_908_residues MMRFKPSLLTLALIAAGASMHSYAADEVATDKTAKDENIEVIQVTGIRRSLQESQSLKMSSSSIVEAISAEDIGKLPDVS IAESLARLPGVSAQRLDGRANVISIRGMGPDFTTATLNGREQASVNDNRSVEFDQYPSELLNRVVVYKTPDASVMAQAIG GTVDMQTISPLAHGEQTIAVSLRGEMNDLGSLNSGSSDTGYRGSISYIDQFADDTIGVAIGYARMMSPNQEERWQAWGYP TNDNGDSVLGGAKPFVRSSELERDGVLAVFEYAPNTTYHSTLDIYYSKFTDDQRLRGIEIPGAWGTNGGVIPTTTDNGLV TEGVIKGAEVVIRNDVNKRDADSLSIGWNNKFNINENWNVEADISMSRANRTDIGMESYSGTGRGTGVGAVDDLGFAYNG KGGYVFDHNLDYSDKNLIKLGDPLGWGSPLGANTQDGFINKPEIEDELKSFRLSAEYVLDGGAVRSVEFGVNRTNRDKTK LDKGYYLTLKGYDGSANYTMAVPDQYLLAPTSLDFFGMGNVLSYDSLAFYNDGNYTETDVADVDLSRATNSWAVQEKVTT GYVMANLESEVFGIPLTGNAGLQAVHTDQSSDGTVATVENGLVVLTPRTAGDSYVEWLPSVNLSFEVADSQVVRLAAART LTRSRMDKMNANLNYTYSANPSGGMVNWSGNAGNPELRPWLARQYDLSYENYFSDQGYFSVAVFYKDLENFVYDQHTDFD FSTLFPQGPTDNPIGDVTQPQNGEGGYVQGVEASVSVDFGMFADVLSGFGTVISGSYNDSEVKETPTSNPTTLPGLSEKT LNATIYYENSGFEARISSRYRSDFLGEVTKISLQRENVNIKAETVVDAQIGYDFSESGIESLYGLSVQFQVNNLTNEPFT SYTSDDQRLVRDYQNYGRNFMLGANYKF >Mature_908_residues MMRFKPSLLTLALIAAGASMHSYAADEVATDKTAKDENIEVIQVTGIRRSLQESQSLKMSSSSIVEAISAEDIGKLPDVS IAESLARLPGVSAQRLDGRANVISIRGMGPDFTTATLNGREQASVNDNRSVEFDQYPSELLNRVVVYKTPDASVMAQAIG GTVDMQTISPLAHGEQTIAVSLRGEMNDLGSLNSGSSDTGYRGSISYIDQFADDTIGVAIGYARMMSPNQEERWQAWGYP TNDNGDSVLGGAKPFVRSSELERDGVLAVFEYAPNTTYHSTLDIYYSKFTDDQRLRGIEIPGAWGTNGGVIPTTTDNGLV TEGVIKGAEVVIRNDVNKRDADSLSIGWNNKFNINENWNVEADISMSRANRTDIGMESYSGTGRGTGVGAVDDLGFAYNG KGGYVFDHNLDYSDKNLIKLGDPLGWGSPLGANTQDGFINKPEIEDELKSFRLSAEYVLDGGAVRSVEFGVNRTNRDKTK LDKGYYLTLKGYDGSANYTMAVPDQYLLAPTSLDFFGMGNVLSYDSLAFYNDGNYTETDVADVDLSRATNSWAVQEKVTT GYVMANLESEVFGIPLTGNAGLQAVHTDQSSDGTVATVENGLVVLTPRTAGDSYVEWLPSVNLSFEVADSQVVRLAAART LTRSRMDKMNANLNYTYSANPSGGMVNWSGNAGNPELRPWLARQYDLSYENYFSDQGYFSVAVFYKDLENFVYDQHTDFD FSTLFPQGPTDNPIGDVTQPQNGEGGYVQGVEASVSVDFGMFADVLSGFGTVISGSYNDSEVKETPTSNPTTLPGLSEKT LNATIYYENSGFEARISSRYRSDFLGEVTKISLQRENVNIKAETVVDAQIGYDFSESGIESLYGLSVQFQVNNLTNEPFT SYTSDDQRLVRDYQNYGRNFMLGANYKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 99106; Mature: 99106
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRFKPSLLTLALIAAGASMHSYAADEVATDKTAKDENIEVIQVTGIRRSLQESQSLKMS CCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEEEEECHHHHHHHHHHHCCC SSSIVEAISAEDIGKLPDVSIAESLARLPGVSAQRLDGRANVISIRGMGPDFTTATLNGR HHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHCCCCCCEEEEECCCCCCEEEEECCC EQASVNDNRSVEFDQYPSELLNRVVVYKTPDASVMAQAIGGTVDMQTISPLAHGEQTIAV CCCCCCCCCCEEHHCCHHHHHCCEEEEECCCHHHHHHHHCCEEEHHHHCHHHCCCEEEEE SLRGEMNDLGSLNSGSSDTGYRGSISYIDQFADDTIGVAIGYARMMSPNQEERWQAWGYP EECCCCHHCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHEEHHHHHCCCCHHHHHEECCCC TNDNGDSVLGGAKPFVRSSELERDGVLAVFEYAPNTTYHSTLDIYYSKFTDDQRLRGIEI CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCEEEC PGAWGTNGGVIPTTTDNGLVTEGVIKGAEVVIRNDVNKRDADSLSIGWNNKFNINENWNV CCCCCCCCCEEECCCCCCEEEHHHHCCCEEEEECCCCCCCCCEEEECCCCEECCCCCCCE EADISMSRANRTDIGMESYSGTGRGTGVGAVDDLGFAYNGKGGYVFDHNLDYSDKNLIKL EEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHCCCEEECCCCCEEEECCCCCCCCCEEEE GDPLGWGSPLGANTQDGFINKPEIEDELKSFRLSAEYVLDGGAVRSVEFGVNRTNRDKTK CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEECEEEEECCCCEEEEEECCCCCCCCHHH LDKGYYLTLKGYDGSANYTMAVPDQYLLAPTSLDFFGMGNVLSYDSLAFYNDGNYTETDV CCCCEEEEEECCCCCCCEEEECCCCEEEECCCCCCCCCCCEECCCCEEEEECCCCCCCCC ADVDLSRATNSWAVQEKVTTGYVMANLESEVFGIPLTGNAGLQAVHTDQSSDGTVATVEN CCCCHHHCCCCEEEEEECCCEEEEEECCCCEEEEEECCCCCCEEEECCCCCCCEEEEECC GLVVLTPRTAGDSYVEWLPSVNLSFEVADSQVVRLAAARTLTRSRMDKMNANLNYTYSAN CEEEEECCCCCCHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC PSGGMVNWSGNAGNPELRPWLARQYDLSYENYFSDQGYFSVAVFYKDLENFVYDQHTDFD CCCCEEEECCCCCCCCCCCHHHHHCCCCHHHHCCCCCCEEEEEEHHHHHHHHCCCCCCCC FSTLFPQGPTDNPIGDVTQPQNGEGGYVQGVEASVSVDFGMFADVLSGFGTVISGSYNDS HHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECHHHHHHHHHCCCCEEECCCCCC EVKETPTSNPTTLPGLSEKTLNATIYYENSGFEARISSRYRSDFLGEVTKISLQRENVNI HHCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEHHHHHHHHHHHCCEEEEEEEECCCCE KAETVVDAQIGYDFSESGIESLYGLSVQFQVNNLTNEPFTSYTSDDQRLVRDYQNYGRNF EEEEEEEEECCCCCCHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCEE MLGANYKF EEECCCCC >Mature Secondary Structure MMRFKPSLLTLALIAAGASMHSYAADEVATDKTAKDENIEVIQVTGIRRSLQESQSLKMS CCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEEEEECHHHHHHHHHHHCCC SSSIVEAISAEDIGKLPDVSIAESLARLPGVSAQRLDGRANVISIRGMGPDFTTATLNGR HHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHCCCCCCEEEEECCCCCCEEEEECCC EQASVNDNRSVEFDQYPSELLNRVVVYKTPDASVMAQAIGGTVDMQTISPLAHGEQTIAV CCCCCCCCCCEEHHCCHHHHHCCEEEEECCCHHHHHHHHCCEEEHHHHCHHHCCCEEEEE SLRGEMNDLGSLNSGSSDTGYRGSISYIDQFADDTIGVAIGYARMMSPNQEERWQAWGYP EECCCCHHCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHEEHHHHHCCCCHHHHHEECCCC TNDNGDSVLGGAKPFVRSSELERDGVLAVFEYAPNTTYHSTLDIYYSKFTDDQRLRGIEI CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCEEEC PGAWGTNGGVIPTTTDNGLVTEGVIKGAEVVIRNDVNKRDADSLSIGWNNKFNINENWNV CCCCCCCCCEEECCCCCCEEEHHHHCCCEEEEECCCCCCCCCEEEECCCCEECCCCCCCE EADISMSRANRTDIGMESYSGTGRGTGVGAVDDLGFAYNGKGGYVFDHNLDYSDKNLIKL EEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHCCCEEECCCCCEEEECCCCCCCCCEEEE GDPLGWGSPLGANTQDGFINKPEIEDELKSFRLSAEYVLDGGAVRSVEFGVNRTNRDKTK CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEECEEEEECCCCEEEEEECCCCCCCCHHH LDKGYYLTLKGYDGSANYTMAVPDQYLLAPTSLDFFGMGNVLSYDSLAFYNDGNYTETDV CCCCEEEEEECCCCCCCEEEECCCCEEEECCCCCCCCCCCEECCCCEEEEECCCCCCCCC ADVDLSRATNSWAVQEKVTTGYVMANLESEVFGIPLTGNAGLQAVHTDQSSDGTVATVEN CCCCHHHCCCCEEEEEECCCEEEEEECCCCEEEEEECCCCCCEEEECCCCCCCEEEEECC GLVVLTPRTAGDSYVEWLPSVNLSFEVADSQVVRLAAARTLTRSRMDKMNANLNYTYSAN CEEEEECCCCCCHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC PSGGMVNWSGNAGNPELRPWLARQYDLSYENYFSDQGYFSVAVFYKDLENFVYDQHTDFD CCCCEEEECCCCCCCCCCCHHHHHCCCCHHHHCCCCCCEEEEEEHHHHHHHHCCCCCCCC FSTLFPQGPTDNPIGDVTQPQNGEGGYVQGVEASVSVDFGMFADVLSGFGTVISGSYNDS HHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECHHHHHHHHHCCCCEEECCCCCC EVKETPTSNPTTLPGLSEKTLNATIYYENSGFEARISSRYRSDFLGEVTKISLQRENVNI HHCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEHHHHHHHHHHHCCEEEEEEEECCCCE KAETVVDAQIGYDFSESGIESLYGLSVQFQVNNLTNEPFTSYTSDDQRLVRDYQNYGRNF EEEEEEEEECCCCCCHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCEE MLGANYKF EEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA