| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875197
Identifier: 160875197
GI number: 160875197
Start: 2478010
End: 2479509
Strand: Reverse
Name: 160875197
Synonym: Sbal195_2084
Alternate gene names: NA
Gene position: 2479509-2478010 (Counterclockwise)
Preceding gene: 160875198
Following gene: 160875196
Centisome position: 46.37
GC content: 44.27
Gene sequence:
>1500_bases ATGAATAAAATCAAAGATATCGTCATTGTCGGTGGCGGTTCTTCAGGTTGGATGACGGCGGCCATGTTGGCAAGATTGTT TAAATCAACACTGAATATCACCCTGATTGAATCTGAAGATATAGGCACAGTGGGCGTAGGTGAAGCCACCATTCCACCAC TGCAAATATTTAATAACGTGCTAGGGATTTCCGAAGCCGATTTTATCAATGCCACCCAAGCAACGTTTAAATTGGGTATT CAATTCGAAAATTGGGGCAAACCGGATGAAGCCTATATGCATGCTTTTGGCAATATAGGTAAAGATATAGGTTTTACTCA ATTTCATCATTACTGGCTCAGCACCTCCCCAAAAGAGGTCAATTCGTTTTGGGATTACTCGGTTAATTACCAAGCGGCAA AACACAATAAGTTTCAAGTACTCCAGCAGATCCCAAACTCTCCCCTTGCCGGCTTAACTCATGCTTATCATTTCGATGCA GCGCTTTATGCCCAATTTTTACGACGTTTCAGTGAGCAACTGGGAGTAAAGCGTATCGAAGGCCAGATTACGGCGGTTGA ACTCACGCCAAACGGCGATATTGAAAGTGTAACCTTAGGATCAGGACAAACCGTAAAAGCTGATTTCTTTATCGATTGCT CGGGCTTTGCCGCGCTACTGATAGAAAAAGCGCTCAAGGTTGGCTTCGATAGCTACCAACATTGGCTACCCTGTGACAGC GCCTATGCCGTACCCTGCGAAAAAACGCCAGCAATAGTGCCTTATACACGTTCTATCGCCCATGATACTGGTTGGCAATG GCGGATCCCGCTGCAGCACCGCACAGGCAATGGGTTAGTCTATTGCAGTCGCTATATCAGTGATAACGCCGCCAAACAGC TTTTACTCAGTAATTTAGATGGTAAGCCGTTGGCTGAACCTAAGAAAATAAATTTTACGACCGGACGACGAATCAAACAG TGGCATAAAAACTGTGTTGCCATCGGCCTTTCGAGTGGGTTCTTAGAGCCTTTAGAATCCACCAGCTTGCATTTAGTCCA ATCAGCGATTATTCGCTTAAGTAAACTCTTTCCACATCAAGGAATTGCACAAGCGAATGTCGATGAGTTTAATCGCCAGT CCCAACTTGAATTTGAACAAATCCGCGATTTTATTATCTTGCACTATCATTTAAACCAAAGGGAAGATGCTCAGGTAAAT GGGTTTTGGCATCAATGCCGAACCATGGTTCTGCCAGAGAGTTTGCAGCAAAAAATCGCCCTATTTCGTGCCACAGGCAC AGTGTTTAGACATCAAGATGAACTCTTTACCGAAGCCGCATGGATTCAAGTCATGTTGGGGCAAGGCATTAGGCCTCTGG ATTTCAATCCATTAGCGGCAACCATTCAACCACAAGCACTGAGTGAATTTCTGCTCAACATGCGCACCATTATTGATAAT ACCGTCACTAAGCTACCAACCCATGATCAGTATTTAGCGCACTTATCGACACATAAATAA
Upstream 100 bases:
>100_bases TGTTACAGAGGCTTTTTTACTTTATCATTTCAAGCCACTAGGCTAGTCATTCATCTGCGTTAATTGATCACCACTAATCA TAAAATGAAAGGCTTATATC
Downstream 100 bases:
>100_bases TAAATACGGCTTAAGAGTTACGACCGACGTTAATAGTGTACTAACTCATCGATTTATAAATTGAATTTGCAGTTTAAATT TGAATCAACAAGGAAAGAAT
Product: tryptophan halogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 499; Mature: 499
Protein sequence:
>499_residues MNKIKDIVIVGGGSSGWMTAAMLARLFKSTLNITLIESEDIGTVGVGEATIPPLQIFNNVLGISEADFINATQATFKLGI QFENWGKPDEAYMHAFGNIGKDIGFTQFHHYWLSTSPKEVNSFWDYSVNYQAAKHNKFQVLQQIPNSPLAGLTHAYHFDA ALYAQFLRRFSEQLGVKRIEGQITAVELTPNGDIESVTLGSGQTVKADFFIDCSGFAALLIEKALKVGFDSYQHWLPCDS AYAVPCEKTPAIVPYTRSIAHDTGWQWRIPLQHRTGNGLVYCSRYISDNAAKQLLLSNLDGKPLAEPKKINFTTGRRIKQ WHKNCVAIGLSSGFLEPLESTSLHLVQSAIIRLSKLFPHQGIAQANVDEFNRQSQLEFEQIRDFIILHYHLNQREDAQVN GFWHQCRTMVLPESLQQKIALFRATGTVFRHQDELFTEAAWIQVMLGQGIRPLDFNPLAATIQPQALSEFLLNMRTIIDN TVTKLPTHDQYLAHLSTHK
Sequences:
>Translated_499_residues MNKIKDIVIVGGGSSGWMTAAMLARLFKSTLNITLIESEDIGTVGVGEATIPPLQIFNNVLGISEADFINATQATFKLGI QFENWGKPDEAYMHAFGNIGKDIGFTQFHHYWLSTSPKEVNSFWDYSVNYQAAKHNKFQVLQQIPNSPLAGLTHAYHFDA ALYAQFLRRFSEQLGVKRIEGQITAVELTPNGDIESVTLGSGQTVKADFFIDCSGFAALLIEKALKVGFDSYQHWLPCDS AYAVPCEKTPAIVPYTRSIAHDTGWQWRIPLQHRTGNGLVYCSRYISDNAAKQLLLSNLDGKPLAEPKKINFTTGRRIKQ WHKNCVAIGLSSGFLEPLESTSLHLVQSAIIRLSKLFPHQGIAQANVDEFNRQSQLEFEQIRDFIILHYHLNQREDAQVN GFWHQCRTMVLPESLQQKIALFRATGTVFRHQDELFTEAAWIQVMLGQGIRPLDFNPLAATIQPQALSEFLLNMRTIIDN TVTKLPTHDQYLAHLSTHK >Mature_499_residues MNKIKDIVIVGGGSSGWMTAAMLARLFKSTLNITLIESEDIGTVGVGEATIPPLQIFNNVLGISEADFINATQATFKLGI QFENWGKPDEAYMHAFGNIGKDIGFTQFHHYWLSTSPKEVNSFWDYSVNYQAAKHNKFQVLQQIPNSPLAGLTHAYHFDA ALYAQFLRRFSEQLGVKRIEGQITAVELTPNGDIESVTLGSGQTVKADFFIDCSGFAALLIEKALKVGFDSYQHWLPCDS AYAVPCEKTPAIVPYTRSIAHDTGWQWRIPLQHRTGNGLVYCSRYISDNAAKQLLLSNLDGKPLAEPKKINFTTGRRIKQ WHKNCVAIGLSSGFLEPLESTSLHLVQSAIIRLSKLFPHQGIAQANVDEFNRQSQLEFEQIRDFIILHYHLNQREDAQVN GFWHQCRTMVLPESLQQKIALFRATGTVFRHQDELFTEAAWIQVMLGQGIRPLDFNPLAATIQPQALSEFLLNMRTIIDN TVTKLPTHDQYLAHLSTHK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006905 [H]
Pfam domain/function: PF04820 Trp_halogenase [H]
EC number: NA
Molecular weight: Translated: 56103; Mature: 56103
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKIKDIVIVGGGSSGWMTAAMLARLFKSTLNITLIESEDIGTVGVGEATIPPLQIFNNV CCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCEEEEECCCCCEECCCCCCCCHHHHHHHH LGISEADFINATQATFKLGIQFENWGKPDEAYMHAFGNIGKDIGFTQFHHYWLSTSPKEV HCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHH NSFWDYSVNYQAAKHNKFQVLQQIPNSPLAGLTHAYHFDAALYAQFLRRFSEQLGVKRIE HHHHCCCCEEEHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEC GQITAVELTPNGDIESVTLGSGQTVKADFFIDCSGFAALLIEKALKVGFDSYQHWLPCDS CEEEEEEECCCCCCCEEEECCCCEEEEEEEEECCHHHHHHHHHHHHHCCHHHHHCCCCCC AYAVPCEKTPAIVPYTRSIAHDTGWQWRIPLQHRTGNGLVYCSRYISDNAAKQLLLSNLD CEECCCCCCCCCCCCHHHHHCCCCCEEEEEEEEECCCCEEEEEHHHCCHHHHHHHHHCCC GKPLAEPKKINFTTGRRIKQWHKNCVAIGLSSGFLEPLESTSLHLVQSAIIRLSKLFPHQ CCCCCCCCEECCCCCHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC GIAQANVDEFNRQSQLEFEQIRDFIILHYHLNQREDAQVNGFWHQCRTMVLPESLQQKIA CCCCCCHHHHCCCCCCCHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHH LFRATGTVFRHQDELFTEAAWIQVMLGQGIRPLDFNPLAATIQPQALSEFLLNMRTIIDN HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHH TVTKLPTHDQYLAHLSTHK HHHCCCCCHHHHHHHHCCC >Mature Secondary Structure MNKIKDIVIVGGGSSGWMTAAMLARLFKSTLNITLIESEDIGTVGVGEATIPPLQIFNNV CCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCEEEEECCCCCEECCCCCCCCHHHHHHHH LGISEADFINATQATFKLGIQFENWGKPDEAYMHAFGNIGKDIGFTQFHHYWLSTSPKEV HCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHH NSFWDYSVNYQAAKHNKFQVLQQIPNSPLAGLTHAYHFDAALYAQFLRRFSEQLGVKRIE HHHHCCCCEEEHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEC GQITAVELTPNGDIESVTLGSGQTVKADFFIDCSGFAALLIEKALKVGFDSYQHWLPCDS CEEEEEEECCCCCCCEEEECCCCEEEEEEEEECCHHHHHHHHHHHHHCCHHHHHCCCCCC AYAVPCEKTPAIVPYTRSIAHDTGWQWRIPLQHRTGNGLVYCSRYISDNAAKQLLLSNLD CEECCCCCCCCCCCCHHHHHCCCCCEEEEEEEEECCCCEEEEEHHHCCHHHHHHHHHCCC GKPLAEPKKINFTTGRRIKQWHKNCVAIGLSSGFLEPLESTSLHLVQSAIIRLSKLFPHQ CCCCCCCCEECCCCCHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC GIAQANVDEFNRQSQLEFEQIRDFIILHYHLNQREDAQVNGFWHQCRTMVLPESLQQKIA CCCCCCHHHHCCCCCCCHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHH LFRATGTVFRHQDELFTEAAWIQVMLGQGIRPLDFNPLAATIQPQALSEFLLNMRTIIDN HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHH TVTKLPTHDQYLAHLSTHK HHHCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]