Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

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The map label for this gene is ybeQ [C]

Identifier: 160875151

GI number: 160875151

Start: 2416817

End: 2418337

Strand: Direct

Name: ybeQ [C]

Synonym: Sbal195_2037

Alternate gene names: 160875151

Gene position: 2416817-2418337 (Clockwise)

Preceding gene: 160875150

Following gene: 160875153

Centisome position: 45.2

GC content: 41.16

Gene sequence:

>1521_bases
ATGGACGATACAAACACATTATTTAAGAAATTAATACAAGCGATTCGAGCGTGTGACGAAAACACTGTTGCCACTTTGAT
TGAGCAGGGTGTTGATGTTGAGCAAGACGGAAACAAAGCATTAATATTGGCCTGCCAACTAGGCTATACATCAATAGTTA
AATGTTTGATTGAGGCCGATGCTAATATCCATCAAAATAACAACGAAGCCCTCTGGCTTGCCGTTACACATCGCCATGCG
GCGGTTACAGTGGTTTTGATGGCTCAAGGAGCTGACCACATGGATCGTGAAGGGGCTATTTGGGAAGAAGCGACAAAATC
ATTCACATCTGAAGATGAATTTACCGCACTTATCGACCTCGGGGCTGAGGCCCTATCCGACATGGATTGGGAACTTCAGT
TAGATTTAGCCCTCCATGGAAACAATCAAGTTCTTGCAGACGTTTTAGTTGAAGCGCTGCCAAATGAACCTGGAACATAT
CCTGTTCTGATAGCTTTAGATCACGGCAAGCTCACTTTAGCAAAACAGTTTTTGGACAATGGAGTCGATTTCCAACAAGA
CAATGAAAGAAGTGCGATTGCATATTATTATGCTTGGATTAATGGTTGCAAATCACTACTACCTCAACTCTTCGCCTGCG
GTGCAACAACATCGGGTGCGCTGTATGAATACATTTATGGTAGTCATTTATCCATCAGTGAGCTCGACGCAGAGTTCCTT
GCTGAAATGCTTAAGATATCTAAATTTGAAAAAACAACTTGTGAACATGCTGCAGAAATCGCAATTTCCAATAATTTTTT
AGATATTGCTGTTGATGCTATTTGCCATCTAGCGGACTTTCCTGCCTCGCTGGAACCGATTTTTTACTCAGCATTTTCAC
ATAATGCAAAGGAGCTTTACCCACTACTGATGTCGCTAAAAGCTGTTATTAGCTTTAGTAATGATGATTTACCTTGGCTA
GATGACTTTATTATCGATTGTACCGACCGTACGTTGATTTCTTACCTTTTAGCACAAGTCGGCCCATCTTCGTTACTCAA
AGTAGAAAAGTTACTCGACAAAGCAATAGAAGAAAAAGACTGGGAATGGGTAAAATATCTTGTTTGCCTTGGAGTAAGAC
CATCTCTAATTTATGGCTTTGATATGGCGATTGTGGCGCTTATTGACAGCATCGAGCATGACAGACCTTATCAGTTTACA
ACCTACTTACAAGTCGCTGAAAAAGGTGGCGGATGGGCCGCAAAAAATGTTGCCGATAGATATTTGGAAGGAGATGGCAT
TGAAAAAAATAAACAACAGGCTGCTTACTGGTATACCAAAGCTGCAGAATATGGATATATATCGTTAAACCTAATGACAA
TGCTAGCCTTAGGTGATGGTATTGAACAGGATAAGCCATCGGCCATTCATTTGTACCGCCTGTTTTCCAATGATGCTAAT
TGCATTCGCTCTGCTGAAATGCAAGAAATGTATGACCAAGATGCATTAGAGAGGATCTTGGGTAATGCTTCCGTCAGTTA
A

Upstream 100 bases:

>100_bases
ACTTAGGGGCTGTACAGATGTGCTGTCTGATGAGCAATTTGCCCTTTTCAAGTTTTGTAATGTTATTGAGATAGCAAACG
ACATGAGAGTTGAATACACA

Downstream 100 bases:

>100_bases
GAAAATTTTAAGACCACAAATAATTAACCCTCTAGTTTTAGGAGAGTCAATAATGGTGTTGTGCTCATAAGCTTTTAATT
TTCAAAGTTTGCGTTGATCT

Product: Sel1 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 506; Mature: 506

Protein sequence:

>506_residues
MDDTNTLFKKLIQAIRACDENTVATLIEQGVDVEQDGNKALILACQLGYTSIVKCLIEADANIHQNNNEALWLAVTHRHA
AVTVVLMAQGADHMDREGAIWEEATKSFTSEDEFTALIDLGAEALSDMDWELQLDLALHGNNQVLADVLVEALPNEPGTY
PVLIALDHGKLTLAKQFLDNGVDFQQDNERSAIAYYYAWINGCKSLLPQLFACGATTSGALYEYIYGSHLSISELDAEFL
AEMLKISKFEKTTCEHAAEIAISNNFLDIAVDAICHLADFPASLEPIFYSAFSHNAKELYPLLMSLKAVISFSNDDLPWL
DDFIIDCTDRTLISYLLAQVGPSSLLKVEKLLDKAIEEKDWEWVKYLVCLGVRPSLIYGFDMAIVALIDSIEHDRPYQFT
TYLQVAEKGGGWAAKNVADRYLEGDGIEKNKQQAAYWYTKAAEYGYISLNLMTMLALGDGIEQDKPSAIHLYRLFSNDAN
CIRSAEMQEMYDQDALERILGNASVS

Sequences:

>Translated_506_residues
MDDTNTLFKKLIQAIRACDENTVATLIEQGVDVEQDGNKALILACQLGYTSIVKCLIEADANIHQNNNEALWLAVTHRHA
AVTVVLMAQGADHMDREGAIWEEATKSFTSEDEFTALIDLGAEALSDMDWELQLDLALHGNNQVLADVLVEALPNEPGTY
PVLIALDHGKLTLAKQFLDNGVDFQQDNERSAIAYYYAWINGCKSLLPQLFACGATTSGALYEYIYGSHLSISELDAEFL
AEMLKISKFEKTTCEHAAEIAISNNFLDIAVDAICHLADFPASLEPIFYSAFSHNAKELYPLLMSLKAVISFSNDDLPWL
DDFIIDCTDRTLISYLLAQVGPSSLLKVEKLLDKAIEEKDWEWVKYLVCLGVRPSLIYGFDMAIVALIDSIEHDRPYQFT
TYLQVAEKGGGWAAKNVADRYLEGDGIEKNKQQAAYWYTKAAEYGYISLNLMTMLALGDGIEQDKPSAIHLYRLFSNDAN
CIRSAEMQEMYDQDALERILGNASVS
>Mature_506_residues
MDDTNTLFKKLIQAIRACDENTVATLIEQGVDVEQDGNKALILACQLGYTSIVKCLIEADANIHQNNNEALWLAVTHRHA
AVTVVLMAQGADHMDREGAIWEEATKSFTSEDEFTALIDLGAEALSDMDWELQLDLALHGNNQVLADVLVEALPNEPGTY
PVLIALDHGKLTLAKQFLDNGVDFQQDNERSAIAYYYAWINGCKSLLPQLFACGATTSGALYEYIYGSHLSISELDAEFL
AEMLKISKFEKTTCEHAAEIAISNNFLDIAVDAICHLADFPASLEPIFYSAFSHNAKELYPLLMSLKAVISFSNDDLPWL
DDFIIDCTDRTLISYLLAQVGPSSLLKVEKLLDKAIEEKDWEWVKYLVCLGVRPSLIYGFDMAIVALIDSIEHDRPYQFT
TYLQVAEKGGGWAAKNVADRYLEGDGIEKNKQQAAYWYTKAAEYGYISLNLMTMLALGDGIEQDKPSAIHLYRLFSNDAN
CIRSAEMQEMYDQDALERILGNASVS

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56329; Mature: 56329

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDTNTLFKKLIQAIRACDENTVATLIEQGVDVEQDGNKALILACQLGYTSIVKCLIEAD
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEEEEEECCHHHHHHHHHHCC
ANIHQNNNEALWLAVTHRHAAVTVVLMAQGADHMDREGAIWEEATKSFTSEDEFTALIDL
CCCCCCCCCEEEEEEECCCCEEEEEEEECCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHH
GAEALSDMDWELQLDLALHGNNQVLADVLVEALPNEPGTYPVLIALDHGKLTLAKQFLDN
CHHHHCCCCCEEEEEEEEECCCHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHC
GVDFQQDNERSAIAYYYAWINGCKSLLPQLFACGATTSGALYEYIYGSHLSISELDAEFL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHH
AEMLKISKFEKTTCEHAAEIAISNNFLDIAVDAICHLADFPASLEPIFYSAFSHNAKELY
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHH
PLLMSLKAVISFSNDDLPWLDDFIIDCTDRTLISYLLAQVGPSSLLKVEKLLDKAIEEKD
HHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
WEWVKYLVCLGVRPSLIYGFDMAIVALIDSIEHDRPYQFTTYLQVAEKGGGWAAKNVADR
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHH
YLEGDGIEKNKQQAAYWYTKAAEYGYISLNLMTMLALGDGIEQDKPSAIHLYRLFSNDAN
HHCCCCCCCCCHHHHHEEEECCCCCEEEHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHH
CIRSAEMQEMYDQDALERILGNASVS
HHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDDTNTLFKKLIQAIRACDENTVATLIEQGVDVEQDGNKALILACQLGYTSIVKCLIEAD
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEEEEEECCHHHHHHHHHHCC
ANIHQNNNEALWLAVTHRHAAVTVVLMAQGADHMDREGAIWEEATKSFTSEDEFTALIDL
CCCCCCCCCEEEEEEECCCCEEEEEEEECCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHH
GAEALSDMDWELQLDLALHGNNQVLADVLVEALPNEPGTYPVLIALDHGKLTLAKQFLDN
CHHHHCCCCCEEEEEEEEECCCHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHC
GVDFQQDNERSAIAYYYAWINGCKSLLPQLFACGATTSGALYEYIYGSHLSISELDAEFL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHH
AEMLKISKFEKTTCEHAAEIAISNNFLDIAVDAICHLADFPASLEPIFYSAFSHNAKELY
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHH
PLLMSLKAVISFSNDDLPWLDDFIIDCTDRTLISYLLAQVGPSSLLKVEKLLDKAIEEKD
HHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
WEWVKYLVCLGVRPSLIYGFDMAIVALIDSIEHDRPYQFTTYLQVAEKGGGWAAKNVADR
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHH
YLEGDGIEKNKQQAAYWYTKAAEYGYISLNLMTMLALGDGIEQDKPSAIHLYRLFSNDAN
HHCCCCCCCCCHHHHHEEEECCCCCEEEHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHH
CIRSAEMQEMYDQDALERILGNASVS
HHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA